|
1
|
SET @OLD_UNIQUE_CHECKS=@@UNIQUE_CHECKS, UNIQUE_CHECKS=0;
|
|
2
|
SET @OLD_FOREIGN_KEY_CHECKS=@@FOREIGN_KEY_CHECKS, FOREIGN_KEY_CHECKS=0;
|
|
3
|
SET @OLD_SQL_MODE=@@SQL_MODE, SQL_MODE='TRADITIONAL';
|
|
4
|
|
|
5
|
CREATE SCHEMA IF NOT EXISTS `default_schema` ;
|
|
6
|
USE `default_schema` ;
|
|
7
|
|
|
8
|
-- -----------------------------------------------------
|
|
9
|
-- Table `default_schema`.`bien_genus_family`
|
|
10
|
-- -----------------------------------------------------
|
|
11
|
CREATE TABLE IF NOT EXISTS `default_schema`.`bien_genus_family` (
|
|
12
|
`family` VARCHAR(250) CHARACTER SET 'utf8' NOT NULL ,
|
|
13
|
`genus` VARCHAR(150) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
14
|
`tot_families` INT(1) NULL DEFAULT NULL ,
|
|
15
|
INDEX `genus` (`genus` ASC) ,
|
|
16
|
INDEX `family` (`family` ASC) ,
|
|
17
|
INDEX `tot_families` (`tot_families` ASC) )
|
|
18
|
ENGINE = InnoDB
|
|
19
|
DEFAULT CHARACTER SET = latin1;
|
|
20
|
|
|
21
|
|
|
22
|
-- -----------------------------------------------------
|
|
23
|
-- Table `default_schema`.`clade`
|
|
24
|
-- -----------------------------------------------------
|
|
25
|
CREATE TABLE IF NOT EXISTS `default_schema`.`clade` (
|
|
26
|
`cladeID` INT(11) UNSIGNED NOT NULL ,
|
|
27
|
`parentCladeID` INT(11) UNSIGNED NULL DEFAULT NULL ,
|
|
28
|
`cladeNameStd` VARCHAR(250) NOT NULL ,
|
|
29
|
`rank` VARCHAR(50) NULL DEFAULT NULL ,
|
|
30
|
`isHybrid` INT(1) UNSIGNED NOT NULL ,
|
|
31
|
`family` VARCHAR(100) NULL DEFAULT NULL ,
|
|
32
|
`leftIndex` INT(11) UNSIGNED NULL DEFAULT NULL ,
|
|
33
|
`rightIndex` INT(11) UNSIGNED NULL DEFAULT NULL ,
|
|
34
|
`source` VARCHAR(25) NULL DEFAULT NULL ,
|
|
35
|
`majorPlantGroup` VARCHAR(45) NULL DEFAULT NULL ,
|
|
36
|
`embryophytes` VARCHAR(45) NULL DEFAULT NULL ,
|
|
37
|
`vascularPlants` VARCHAR(45) NULL DEFAULT NULL ,
|
|
38
|
`seedPlants` VARCHAR(45) NULL DEFAULT NULL ,
|
|
39
|
`floweringPlants` VARCHAR(45) NULL DEFAULT NULL ,
|
|
40
|
PRIMARY KEY USING BTREE (`cladeID`) ,
|
|
41
|
INDEX `nameStaging_isHybrid` (`isHybrid` ASC) ,
|
|
42
|
INDEX `nameStaging_family` (`family` ASC) ,
|
|
43
|
INDEX `nameStaging_leftIndex` (`leftIndex` ASC) ,
|
|
44
|
INDEX `nameStaging_rightIndex` (`rightIndex` ASC) ,
|
|
45
|
INDEX `idx_source` (`source` ASC) ,
|
|
46
|
INDEX `nameStaging_rank` USING BTREE (`rank` ASC) ,
|
|
47
|
INDEX `Index_majorPlantGroup` USING BTREE (`majorPlantGroup` ASC) ,
|
|
48
|
INDEX `Index_embryophytes` USING BTREE (`embryophytes` ASC) ,
|
|
49
|
INDEX `Index_seedPlants` USING BTREE (`seedPlants` ASC) ,
|
|
50
|
INDEX `Index_vascularPlants` USING BTREE (`vascularPlants` ASC) ,
|
|
51
|
INDEX `Index_floweringPlants` USING BTREE (`floweringPlants` ASC) ,
|
|
52
|
INDEX `nameStaging_parentCladeID` USING BTREE (`parentCladeID` ASC) ,
|
|
53
|
INDEX `nameStaging_cladeNameStd` USING BTREE (`cladeNameStd` ASC) )
|
|
54
|
ENGINE = InnoDB
|
|
55
|
DEFAULT CHARACTER SET = utf8;
|
|
56
|
|
|
57
|
|
|
58
|
-- -----------------------------------------------------
|
|
59
|
-- Table `default_schema`.`cladeName`
|
|
60
|
-- -----------------------------------------------------
|
|
61
|
CREATE TABLE IF NOT EXISTS `default_schema`.`cladeName` (
|
|
62
|
`cladeNameID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
63
|
`cladeID` INT(10) UNSIGNED NOT NULL ,
|
|
64
|
`cladeName` VARCHAR(250) NOT NULL ,
|
|
65
|
`cladeNameUnique` VARCHAR(300) NULL DEFAULT NULL ,
|
|
66
|
`nameStatus` VARCHAR(50) NULL DEFAULT NULL ,
|
|
67
|
`source` VARCHAR(45) NULL DEFAULT NULL ,
|
|
68
|
PRIMARY KEY USING BTREE (`cladeNameID`) ,
|
|
69
|
INDEX `idx_cladeID` USING BTREE (`cladeID` ASC) ,
|
|
70
|
INDEX `Index_source` (`source` ASC) ,
|
|
71
|
INDEX `idx_name` USING BTREE (`cladeName` ASC) ,
|
|
72
|
INDEX `idx_nameStatus` USING BTREE (`nameStatus` ASC) ,
|
|
73
|
CONSTRAINT `cladeName_ibfk_1`
|
|
74
|
FOREIGN KEY (`cladeID` )
|
|
75
|
REFERENCES `default_schema`.`clade` (`cladeID` )
|
|
76
|
ON DELETE CASCADE
|
|
77
|
ON UPDATE CASCADE)
|
|
78
|
ENGINE = InnoDB
|
|
79
|
DEFAULT CHARACTER SET = utf8;
|
|
80
|
|
|
81
|
|
|
82
|
-- -----------------------------------------------------
|
|
83
|
-- Table `default_schema`.`DataSource`
|
|
84
|
-- -----------------------------------------------------
|
|
85
|
CREATE TABLE IF NOT EXISTS `default_schema`.`DataSource` (
|
|
86
|
`DataSourceID` INT(10) UNSIGNED NOT NULL AUTO_INCREMENT ,
|
|
87
|
`DataSourceName` VARCHAR(255) NOT NULL ,
|
|
88
|
`DataSourceType` VARCHAR(255) NOT NULL ,
|
|
89
|
PRIMARY KEY (`DataSourceID`) ,
|
|
90
|
INDEX `DataSourceName` (`DataSourceName` ASC) ,
|
|
91
|
INDEX `DataSourceType` (`DataSourceType` ASC) )
|
|
92
|
ENGINE = InnoDB
|
|
93
|
DEFAULT CHARACTER SET = utf8,
|
|
94
|
COMMENT = 'Data sources for plots or specimens' ;
|
|
95
|
|
|
96
|
|
|
97
|
-- -----------------------------------------------------
|
|
98
|
-- Table `default_schema`.`PlotMetaDataDimension`
|
|
99
|
-- -----------------------------------------------------
|
|
100
|
CREATE TABLE IF NOT EXISTS `default_schema`.`PlotMetaDataDimension` (
|
|
101
|
`DBPlotID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
102
|
`DBSourceName` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
103
|
`ContactName` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
104
|
`ContactEmail` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
105
|
`ContactTelephone` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
106
|
`Continent` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
107
|
`Country` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
108
|
`StateProvince` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
109
|
`verbatimCountry` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
110
|
`County` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
111
|
`Locality` VARCHAR(256) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
112
|
`VegetationCategory` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
113
|
`PlotCD` BIGINT(32) NULL DEFAULT NULL ,
|
|
114
|
`PlotName` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
115
|
`PlotCensusMethod` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
116
|
`PlotArea` VARCHAR(10) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
117
|
`PlotAreaUnits` VARCHAR(10) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
118
|
`PlotShape` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
119
|
`PlotDecimalLatitude` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
120
|
`PlotDecimalLongitude` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
121
|
`CoordinateUncertainty` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
122
|
`CoordinateUncertaintyUnits` VARCHAR(10) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
123
|
`PlotReferenceX` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
124
|
`PlotReferenceY` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
125
|
`PlotMaxDBH` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
126
|
`PlotMinDBH` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
127
|
`test` TINYINT(3) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
128
|
PRIMARY KEY (`DBPlotID`) ,
|
|
129
|
INDEX `DBSourceName` (`DBSourceName` ASC) ,
|
|
130
|
INDEX `PlotName_2` (`PlotName` ASC, `DBSourceName` ASC) )
|
|
131
|
ENGINE = InnoDB
|
|
132
|
DEFAULT CHARACTER SET = utf8
|
|
133
|
COLLATE = utf8_bin;
|
|
134
|
|
|
135
|
|
|
136
|
-- -----------------------------------------------------
|
|
137
|
-- Table `default_schema`.`geoIndividualObservation`
|
|
138
|
-- -----------------------------------------------------
|
|
139
|
CREATE TABLE IF NOT EXISTS `default_schema`.`geoIndividualObservation` (
|
|
140
|
`ID` INT(11) NOT NULL COMMENT 'Links 1:1 with DBPlotID' ,
|
|
141
|
`countryISO` VARCHAR(25) NULL DEFAULT NULL ,
|
|
142
|
`countryStd` VARCHAR(150) NULL DEFAULT NULL ,
|
|
143
|
`isInCountry` INT(1) NULL DEFAULT NULL ,
|
|
144
|
`countryDistError` DOUBLE NULL DEFAULT NULL ,
|
|
145
|
`stateProvinceStd` VARCHAR(150) NULL DEFAULT NULL ,
|
|
146
|
`isInStateProvince` INT(1) NULL DEFAULT NULL ,
|
|
147
|
`stateProvinceDistError` DOUBLE NULL DEFAULT NULL ,
|
|
148
|
`countyParishStd` VARCHAR(150) NULL DEFAULT NULL ,
|
|
149
|
`isInCountyParish` INT(1) NULL DEFAULT NULL ,
|
|
150
|
`countyParishDistError` DOUBLE NULL DEFAULT NULL ,
|
|
151
|
`isValidLatLong` INT(1) NULL DEFAULT NULL ,
|
|
152
|
`isCultivated` INT(1) NULL DEFAULT '0' ,
|
|
153
|
`isCultivatedReason` VARCHAR(255) NULL DEFAULT NULL ,
|
|
154
|
PRIMARY KEY (`ID`) ,
|
|
155
|
INDEX `geoI_countryISO_NDX` (`countryISO` ASC) ,
|
|
156
|
INDEX `geoI_countryStd_NDX` (`countryStd` ASC) ,
|
|
157
|
INDEX `geoI_isInCountry_NDX` (`isInCountry` ASC) ,
|
|
158
|
INDEX `geoI_countryDistError_NDX` (`countryDistError` ASC) ,
|
|
159
|
INDEX `geoI_stateProvinceStd_NDX` (`stateProvinceStd` ASC) ,
|
|
160
|
INDEX `geoI_isInStateProvince_NDX` (`isInStateProvince` ASC) ,
|
|
161
|
INDEX `geoI_stateProvinceDistError_NDX` (`stateProvinceDistError` ASC) ,
|
|
162
|
INDEX `geoI_countyParishStd_NDX` (`countyParishStd` ASC) ,
|
|
163
|
INDEX `geoI_isInCountyParish_NDX` (`isInCountyParish` ASC) ,
|
|
164
|
INDEX `geoI_countyParishDistError_NDX` (`countyParishDistError` ASC) ,
|
|
165
|
INDEX `geoI_isValidLatLong_NDX` (`isValidLatLong` ASC) ,
|
|
166
|
INDEX `geoI_isCultivated` (`isCultivated` ASC) ,
|
|
167
|
INDEX `geoI_isCultivatedReason` (`isCultivatedReason` ASC) ,
|
|
168
|
CONSTRAINT `geoindividualobservation_ibfk_1`
|
|
169
|
FOREIGN KEY (`ID` )
|
|
170
|
REFERENCES `default_schema`.`PlotMetaDataDimension` (`DBPlotID` )
|
|
171
|
ON DELETE CASCADE
|
|
172
|
ON UPDATE CASCADE)
|
|
173
|
ENGINE = InnoDB
|
|
174
|
DEFAULT CHARACTER SET = utf8;
|
|
175
|
|
|
176
|
|
|
177
|
-- -----------------------------------------------------
|
|
178
|
-- Table `default_schema`.`geoPlotMetaDataDimension`
|
|
179
|
-- -----------------------------------------------------
|
|
180
|
CREATE TABLE IF NOT EXISTS `default_schema`.`geoPlotMetaDataDimension` (
|
|
181
|
`ID` INT(11) NOT NULL COMMENT 'Links 1:1 with DBPlotID' ,
|
|
182
|
`countryISO` VARCHAR(25) NULL DEFAULT NULL ,
|
|
183
|
`countryStd` VARCHAR(150) NULL DEFAULT NULL ,
|
|
184
|
`isInCountry` INT(1) NULL DEFAULT NULL ,
|
|
185
|
`countryDistError` DOUBLE NULL DEFAULT NULL ,
|
|
186
|
`stateProvinceStd` VARCHAR(150) NULL DEFAULT NULL ,
|
|
187
|
`isInStateProvince` INT(1) NULL DEFAULT NULL ,
|
|
188
|
`stateProvinceDistError` DOUBLE NULL DEFAULT NULL ,
|
|
189
|
`countyParishStd` VARCHAR(150) NULL DEFAULT NULL ,
|
|
190
|
`isInCountyParish` INT(1) NULL DEFAULT NULL ,
|
|
191
|
`countyParishDistError` DOUBLE NULL DEFAULT NULL ,
|
|
192
|
`isValidLatLong` INT(1) NULL DEFAULT NULL ,
|
|
193
|
`isCultivated` INT(1) NULL DEFAULT '0' ,
|
|
194
|
`isCultivatedReason` VARCHAR(255) NULL DEFAULT NULL ,
|
|
195
|
PRIMARY KEY (`ID`) ,
|
|
196
|
INDEX `geoP_countryISO_NDX` (`countryISO` ASC) ,
|
|
197
|
INDEX `geoP_countryStd_NDX` (`countryStd` ASC) ,
|
|
198
|
INDEX `geoP_isInCountry_NDX` (`isInCountry` ASC) ,
|
|
199
|
INDEX `geoP_countryDistError_NDX` (`countryDistError` ASC) ,
|
|
200
|
INDEX `geoP_stateProvinceStd_NDX` (`stateProvinceStd` ASC) ,
|
|
201
|
INDEX `geoP_isInStateProvince_NDX` (`isInStateProvince` ASC) ,
|
|
202
|
INDEX `geoP_stateProvinceDistError_NDX` (`stateProvinceDistError` ASC) ,
|
|
203
|
INDEX `geoP_countyParishStd_NDX` (`countyParishStd` ASC) ,
|
|
204
|
INDEX `geoP_isInCountyParish_NDX` (`isInCountyParish` ASC) ,
|
|
205
|
INDEX `geoP_countyParishDistError_NDX` (`countyParishDistError` ASC) ,
|
|
206
|
INDEX `geoP_isValidLatLong_NDX` (`isValidLatLong` ASC) ,
|
|
207
|
INDEX `geoP_isCultivated` (`isCultivated` ASC) ,
|
|
208
|
INDEX `geo_isCultivatedReason` (`isCultivatedReason` ASC) ,
|
|
209
|
CONSTRAINT `geoplotmetadatadimension_ibfk_1`
|
|
210
|
FOREIGN KEY (`ID` )
|
|
211
|
REFERENCES `default_schema`.`PlotMetaDataDimension` (`DBPlotID` )
|
|
212
|
ON DELETE CASCADE
|
|
213
|
ON UPDATE CASCADE)
|
|
214
|
ENGINE = InnoDB
|
|
215
|
DEFAULT CHARACTER SET = utf8;
|
|
216
|
|
|
217
|
|
|
218
|
-- -----------------------------------------------------
|
|
219
|
-- Table `default_schema`.`TaxonDimension`
|
|
220
|
-- -----------------------------------------------------
|
|
221
|
CREATE TABLE IF NOT EXISTS `default_schema`.`TaxonDimension` (
|
|
222
|
`TaxonomyID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
223
|
`FamilyName` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
224
|
`GenusName` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
225
|
`SpecificEpithet` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
226
|
`InfraspecificEpithet` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
227
|
`InfraspecificRank` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
228
|
`Authority` VARCHAR(128) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
229
|
`is_plotName` INT(1) UNSIGNED NULL DEFAULT '0' ,
|
|
230
|
`taxonAuthorityVerbatim` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
231
|
`taxonMatched` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
232
|
`taxonMatchedAuthority` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
233
|
`unmatchedTerms` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
234
|
`matchScore` DECIMAL(3,2) NULL DEFAULT NULL ,
|
|
235
|
`taxonMatchedAcceptance` VARCHAR(1) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
236
|
`familyCorrected` VARCHAR(50) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
237
|
`genusCorrected` VARCHAR(150) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
238
|
`speciesCorrected` VARCHAR(255) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
239
|
`taxonCorrected` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
240
|
`authorityCorrected` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
241
|
`taxonCorrectedTnrsID` INT(10) UNSIGNED NULL DEFAULT NULL ,
|
|
242
|
`taxonCorrectedRank` VARCHAR(25) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
243
|
`taxonCorrectedAcceptance` VARCHAR(1) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
244
|
`morphospecies` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
245
|
`taxonMorphospecies` VARCHAR(250) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
246
|
`is_scrubbed` INT(1) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
247
|
PRIMARY KEY (`TaxonomyID`) ,
|
|
248
|
INDEX `FamilyName` (`FamilyName` ASC) ,
|
|
249
|
INDEX `GenusName` (`GenusName` ASC) ,
|
|
250
|
INDEX `SpecificEpithet` (`SpecificEpithet` ASC) ,
|
|
251
|
INDEX `InfraspecificRank` (`InfraspecificRank` ASC) ,
|
|
252
|
INDEX `FamilyName_2` (`FamilyName` ASC, `GenusName` ASC, `SpecificEpithet` ASC, `InfraspecificEpithet` ASC, `InfraspecificRank` ASC, `Authority` ASC) ,
|
|
253
|
INDEX `InfraspecificEpithet` (`InfraspecificEpithet` ASC) ,
|
|
254
|
INDEX `taxonAuthorityVerbatim` (`taxonAuthorityVerbatim` ASC) ,
|
|
255
|
INDEX `taxonCorrected` (`taxonCorrected` ASC) ,
|
|
256
|
INDEX `taxonMorphospecies` (`taxonMorphospecies` ASC) ,
|
|
257
|
INDEX `is_scrubbed` (`is_scrubbed` ASC) ,
|
|
258
|
INDEX `TD_familyCorrected` (`familyCorrected` ASC) ,
|
|
259
|
INDEX `TD_taxonMatchedAcceptance` (`taxonMatchedAcceptance` ASC) ,
|
|
260
|
INDEX `TD_taxonCorrectedAcceptance` (`taxonCorrectedAcceptance` ASC) ,
|
|
261
|
INDEX `TD_taxonCorrectedRank` (`taxonCorrectedRank` ASC) ,
|
|
262
|
INDEX `taxonCorrectedTnrsID` (`taxonCorrectedTnrsID` ASC) ,
|
|
263
|
INDEX `TD_is_plotName` (`is_plotName` ASC) ,
|
|
264
|
INDEX `genusCorrected_idx` (`genusCorrected` ASC) ,
|
|
265
|
INDEX `speciesCorrected` (`speciesCorrected` ASC) )
|
|
266
|
ENGINE = InnoDB
|
|
267
|
DEFAULT CHARACTER SET = utf8
|
|
268
|
COLLATE = utf8_bin
|
|
269
|
ROW_FORMAT = FIXED;
|
|
270
|
|
|
271
|
|
|
272
|
-- -----------------------------------------------------
|
|
273
|
-- Table `default_schema`.`SpecimenSourceData`
|
|
274
|
-- -----------------------------------------------------
|
|
275
|
CREATE TABLE IF NOT EXISTS `default_schema`.`SpecimenSourceData` (
|
|
276
|
`DBSourceID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
277
|
`DBSourceName` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
278
|
`ContactName` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
279
|
`ContactEmail` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
280
|
`ContactTelephone` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
281
|
`SpecimenInstitutionCD` VARCHAR(128) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
282
|
`SpecimenCollectionCD` VARCHAR(128) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
283
|
`test` TINYINT(3) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
284
|
PRIMARY KEY (`DBSourceID`) ,
|
|
285
|
INDEX `DBSourceName` (`DBSourceName` ASC) ,
|
|
286
|
INDEX `SpecimenInstitutionCD` (`SpecimenInstitutionCD` ASC, `SpecimenCollectionCD` ASC, `DBSourceName` ASC) )
|
|
287
|
ENGINE = InnoDB
|
|
288
|
DEFAULT CHARACTER SET = utf8
|
|
289
|
COLLATE = utf8_bin;
|
|
290
|
|
|
291
|
|
|
292
|
-- -----------------------------------------------------
|
|
293
|
-- Table `default_schema`.`ObservationSpecimen`
|
|
294
|
-- -----------------------------------------------------
|
|
295
|
CREATE TABLE IF NOT EXISTS `default_schema`.`ObservationSpecimen` (
|
|
296
|
`ObservationSpecimenID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
297
|
`DBSourceID` INT(11) NOT NULL ,
|
|
298
|
`Continent` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
299
|
`Country` VARCHAR(100) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
300
|
`StateProvince` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
301
|
`verbatimCountry` VARCHAR(100) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
302
|
`County` VARCHAR(100) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
303
|
`Locality` VARCHAR(1024) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
304
|
`Collector` VARCHAR(256) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
305
|
`IdentifiedBy` VARCHAR(128) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
306
|
`IdentifiedDate` DATE NULL DEFAULT NULL ,
|
|
307
|
`CoordinateUncertainty` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
308
|
`CoordinateUncertaintyUnits` VARCHAR(10) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
309
|
`VegetationCategory` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
310
|
`test` TINYINT(3) UNSIGNED NOT NULL ,
|
|
311
|
`Cultivated` INT(1) NOT NULL ,
|
|
312
|
`CollectionNumber` VARCHAR(24) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
313
|
PRIMARY KEY (`ObservationSpecimenID`) ,
|
|
314
|
INDEX `RefSpecimenSourceData421` (`DBSourceID` ASC) ,
|
|
315
|
INDEX `DBSourceID` (`DBSourceID` ASC, `Continent` ASC, `Country` ASC, `StateProvince` ASC, `County` ASC, `Locality`(255) ASC, `Collector`(255) ASC, `IdentifiedBy` ASC, `IdentifiedDate` ASC, `CoordinateUncertainty` ASC, `CoordinateUncertaintyUnits` ASC, `VegetationCategory` ASC) ,
|
|
316
|
CONSTRAINT `observationspecimen_ibfk_1`
|
|
317
|
FOREIGN KEY (`DBSourceID` )
|
|
318
|
REFERENCES `default_schema`.`SpecimenSourceData` (`DBSourceID` )
|
|
319
|
ON DELETE CASCADE
|
|
320
|
ON UPDATE CASCADE)
|
|
321
|
ENGINE = InnoDB
|
|
322
|
DEFAULT CHARACTER SET = utf8
|
|
323
|
COLLATE = utf8_bin;
|
|
324
|
|
|
325
|
|
|
326
|
-- -----------------------------------------------------
|
|
327
|
-- Table `default_schema`.`IndividualObservation`
|
|
328
|
-- -----------------------------------------------------
|
|
329
|
CREATE TABLE IF NOT EXISTS `default_schema`.`IndividualObservation` (
|
|
330
|
`ObservationID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
331
|
`ObservationType` INT(11) NULL DEFAULT NULL ,
|
|
332
|
`PlotTreeTag` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
333
|
`DBPlotID` INT(11) NULL DEFAULT NULL ,
|
|
334
|
`SpecimenCatalogNO` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
335
|
`ObservationSpecimenID` INT(11) NULL DEFAULT NULL ,
|
|
336
|
`LatestDateCollected` DATE NULL DEFAULT NULL ,
|
|
337
|
`DecimalLatitude` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
338
|
`DecimalLongitude` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
339
|
`NumberOfStems` INT(11) NULL DEFAULT NULL ,
|
|
340
|
`BasalDiameter` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
341
|
`Height` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
342
|
`TaxonomyID` INT(11) NOT NULL ,
|
|
343
|
`RawTreeID` INT(10) NULL DEFAULT NULL ,
|
|
344
|
`test` TINYINT(3) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
345
|
PRIMARY KEY (`ObservationID`) ,
|
|
346
|
INDEX `RefPlotMetaDataDimension411` (`DBPlotID` ASC) ,
|
|
347
|
INDEX `RefTaxonDimension381` (`TaxonomyID` ASC) ,
|
|
348
|
INDEX `ObservationSpecimenID` (`ObservationSpecimenID` ASC) ,
|
|
349
|
CONSTRAINT `individualobservation_ibfk_3`
|
|
350
|
FOREIGN KEY (`TaxonomyID` )
|
|
351
|
REFERENCES `default_schema`.`TaxonDimension` (`TaxonomyID` )
|
|
352
|
ON DELETE CASCADE
|
|
353
|
ON UPDATE CASCADE,
|
|
354
|
CONSTRAINT `individualobservation_ibfk_1`
|
|
355
|
FOREIGN KEY (`ObservationSpecimenID` )
|
|
356
|
REFERENCES `default_schema`.`ObservationSpecimen` (`ObservationSpecimenID` )
|
|
357
|
ON DELETE CASCADE
|
|
358
|
ON UPDATE CASCADE,
|
|
359
|
CONSTRAINT `individualobservation_ibfk_2`
|
|
360
|
FOREIGN KEY (`DBPlotID` )
|
|
361
|
REFERENCES `default_schema`.`PlotMetaDataDimension` (`DBPlotID` )
|
|
362
|
ON DELETE CASCADE
|
|
363
|
ON UPDATE CASCADE)
|
|
364
|
ENGINE = InnoDB
|
|
365
|
DEFAULT CHARACTER SET = utf8
|
|
366
|
COLLATE = utf8_bin;
|
|
367
|
|
|
368
|
|
|
369
|
-- -----------------------------------------------------
|
|
370
|
-- Table `default_schema`.`IndividualObservationMeasurement`
|
|
371
|
-- -----------------------------------------------------
|
|
372
|
CREATE TABLE IF NOT EXISTS `default_schema`.`IndividualObservationMeasurement` (
|
|
373
|
`ObservationID` INT(11) NOT NULL ,
|
|
374
|
`StemNO` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
375
|
`ObservationNO` INT(11) NOT NULL ,
|
|
376
|
`PrimaryStem` INT(11) NULL DEFAULT NULL ,
|
|
377
|
`DBH` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
378
|
`HOM` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
379
|
`test` TINYINT(3) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
380
|
PRIMARY KEY (`StemNO`) ,
|
|
381
|
UNIQUE INDEX `ObservationID` (`ObservationID` ASC, `StemNO` ASC, `ObservationNO` ASC) ,
|
|
382
|
INDEX `RefIndividualObservation11` (`ObservationID` ASC) ,
|
|
383
|
CONSTRAINT `IndividualObservationMeasurement_ibfk_1`
|
|
384
|
FOREIGN KEY (`ObservationID` )
|
|
385
|
REFERENCES `default_schema`.`IndividualObservation` (`ObservationID` )
|
|
386
|
ON DELETE CASCADE
|
|
387
|
ON UPDATE CASCADE)
|
|
388
|
ENGINE = InnoDB
|
|
389
|
DEFAULT CHARACTER SET = utf8
|
|
390
|
COLLATE = utf8_bin;
|
|
391
|
|
|
392
|
|
|
393
|
-- -----------------------------------------------------
|
|
394
|
-- Table `default_schema`.`PlotTimeDimension`
|
|
395
|
-- -----------------------------------------------------
|
|
396
|
CREATE TABLE IF NOT EXISTS `default_schema`.`PlotTimeDimension` (
|
|
397
|
`PlotTimeID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
398
|
`CensusID` INT(11) NULL DEFAULT NULL ,
|
|
399
|
`CensusName` VARCHAR(32) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
400
|
`CensusStartDate` DATE NULL DEFAULT NULL ,
|
|
401
|
`CensusEndDate` DATE NULL DEFAULT NULL ,
|
|
402
|
`DBPlotID` INT(11) NOT NULL ,
|
|
403
|
`test` TINYINT(3) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
404
|
PRIMARY KEY (`PlotTimeID`) ,
|
|
405
|
INDEX `Ref613` (`DBPlotID` ASC) ,
|
|
406
|
INDEX `CensusName_2` (`CensusName` ASC, `DBPlotID` ASC, `CensusID` ASC) ,
|
|
407
|
INDEX `CensusName_5` (`CensusName` ASC, `CensusID` ASC) ,
|
|
408
|
CONSTRAINT `plottimedimension_ibfk_1`
|
|
409
|
FOREIGN KEY (`DBPlotID` )
|
|
410
|
REFERENCES `default_schema`.`PlotMetaDataDimension` (`DBPlotID` )
|
|
411
|
ON DELETE CASCADE
|
|
412
|
ON UPDATE CASCADE)
|
|
413
|
ENGINE = InnoDB
|
|
414
|
DEFAULT CHARACTER SET = utf8
|
|
415
|
COLLATE = utf8_bin;
|
|
416
|
|
|
417
|
|
|
418
|
-- -----------------------------------------------------
|
|
419
|
-- Table `default_schema`.`PlotAggregateFact`
|
|
420
|
-- -----------------------------------------------------
|
|
421
|
CREATE TABLE IF NOT EXISTS `default_schema`.`PlotAggregateFact` (
|
|
422
|
`DBPlotID` INT(11) NOT NULL ,
|
|
423
|
`PlotTimeID` INT(11) NOT NULL ,
|
|
424
|
`TotalIndividuals` INT(11) NULL DEFAULT NULL ,
|
|
425
|
`TotalIndividualsAbove1cm` INT(11) NULL DEFAULT NULL ,
|
|
426
|
`TotalIndividualsAbove2.5cm` INT(11) NULL DEFAULT NULL ,
|
|
427
|
`TotalIndividualsAbove10cm` INT(11) NULL DEFAULT NULL ,
|
|
428
|
`PercentCover` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
429
|
`TaxonomyID` INT(11) NOT NULL ,
|
|
430
|
`del` INT(1) UNSIGNED NULL DEFAULT NULL ,
|
|
431
|
`test` TINYINT(3) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
432
|
PRIMARY KEY (`DBPlotID`, `PlotTimeID`, `TaxonomyID`) ,
|
|
433
|
INDEX `RefPlotMetaDataDimension61` (`DBPlotID` ASC) ,
|
|
434
|
INDEX `RefPlotTimeDimension371` (`PlotTimeID` ASC) ,
|
|
435
|
INDEX `RefTaxonDimension181` (`TaxonomyID` ASC) ,
|
|
436
|
CONSTRAINT `plotaggregatefact_ibfk_3`
|
|
437
|
FOREIGN KEY (`TaxonomyID` )
|
|
438
|
REFERENCES `default_schema`.`TaxonDimension` (`TaxonomyID` )
|
|
439
|
ON DELETE CASCADE
|
|
440
|
ON UPDATE CASCADE,
|
|
441
|
CONSTRAINT `plotaggregatefact_ibfk_1`
|
|
442
|
FOREIGN KEY (`DBPlotID` )
|
|
443
|
REFERENCES `default_schema`.`PlotMetaDataDimension` (`DBPlotID` )
|
|
444
|
ON DELETE CASCADE
|
|
445
|
ON UPDATE CASCADE,
|
|
446
|
CONSTRAINT `plotaggregatefact_ibfk_2`
|
|
447
|
FOREIGN KEY (`PlotTimeID` )
|
|
448
|
REFERENCES `default_schema`.`PlotTimeDimension` (`PlotTimeID` )
|
|
449
|
ON DELETE CASCADE
|
|
450
|
ON UPDATE CASCADE)
|
|
451
|
ENGINE = InnoDB
|
|
452
|
DEFAULT CHARACTER SET = utf8
|
|
453
|
COLLATE = utf8_bin;
|
|
454
|
|
|
455
|
|
|
456
|
-- -----------------------------------------------------
|
|
457
|
-- Table `default_schema`.`TaxonDataSource`
|
|
458
|
-- -----------------------------------------------------
|
|
459
|
CREATE TABLE IF NOT EXISTS `default_schema`.`TaxonDataSource` (
|
|
460
|
`TaxonDataSourceID` INT(10) UNSIGNED NOT NULL AUTO_INCREMENT ,
|
|
461
|
`DataSourceID` INT(10) UNSIGNED NOT NULL ,
|
|
462
|
`TaxonomyID` INT(11) NOT NULL ,
|
|
463
|
`TotalObservations` INT(10) UNSIGNED NULL DEFAULT NULL ,
|
|
464
|
`GeoreferencedObservations` INT(10) UNSIGNED NULL DEFAULT NULL ,
|
|
465
|
PRIMARY KEY (`TaxonDataSourceID`) ,
|
|
466
|
INDEX `DataSourceID` (`DataSourceID` ASC) ,
|
|
467
|
INDEX `TaxonomyID` (`TaxonomyID` ASC) ,
|
|
468
|
CONSTRAINT `TaxonDataSource_ibfk_2`
|
|
469
|
FOREIGN KEY (`TaxonomyID` )
|
|
470
|
REFERENCES `default_schema`.`TaxonDimension` (`TaxonomyID` )
|
|
471
|
ON DELETE CASCADE
|
|
472
|
ON UPDATE CASCADE,
|
|
473
|
CONSTRAINT `TaxonDataSource_ibfk_1`
|
|
474
|
FOREIGN KEY (`DataSourceID` )
|
|
475
|
REFERENCES `default_schema`.`DataSource` (`DataSourceID` )
|
|
476
|
ON DELETE CASCADE
|
|
477
|
ON UPDATE CASCADE)
|
|
478
|
ENGINE = InnoDB
|
|
479
|
DEFAULT CHARACTER SET = utf8,
|
|
480
|
COMMENT = 'Links taxa to data sources in which they are used' ;
|
|
481
|
|
|
482
|
|
|
483
|
-- -----------------------------------------------------
|
|
484
|
-- Table `default_schema`.`TaxonObservation`
|
|
485
|
-- -----------------------------------------------------
|
|
486
|
CREATE TABLE IF NOT EXISTS `default_schema`.`TaxonObservation` (
|
|
487
|
`TaxonomyObservationID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
488
|
`TaxonomyID` INT(11) NULL DEFAULT NULL ,
|
|
489
|
`PlotOrSpecimenFlag` INT(11) NULL DEFAULT NULL ,
|
|
490
|
`DBPlotID` INT(11) NOT NULL ,
|
|
491
|
`DBSourceID` INT(11) NOT NULL ,
|
|
492
|
`GBIFScientificNameOriginal` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
493
|
`GBIFFamilyOriginal` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
494
|
`GBIFGenusOriginal` VARCHAR(64) CHARACTER SET 'utf8' COLLATE 'utf8_bin' NULL DEFAULT NULL ,
|
|
495
|
`test` TINYINT(3) UNSIGNED NOT NULL DEFAULT '0' ,
|
|
496
|
PRIMARY KEY (`TaxonomyObservationID`) ,
|
|
497
|
INDEX `RefTaxonDimension301` (`TaxonomyID` ASC) ,
|
|
498
|
INDEX `Ref614` (`DBPlotID` ASC) ,
|
|
499
|
INDEX `TaxonomyID_2` (`TaxonomyID` ASC, `DBPlotID` ASC) ,
|
|
500
|
INDEX `DBSourceID` (`DBSourceID` ASC) ,
|
|
501
|
CONSTRAINT `taxonobservation_ibfk_3`
|
|
502
|
FOREIGN KEY (`TaxonomyID` )
|
|
503
|
REFERENCES `default_schema`.`TaxonDimension` (`TaxonomyID` )
|
|
504
|
ON DELETE CASCADE
|
|
505
|
ON UPDATE CASCADE,
|
|
506
|
CONSTRAINT `taxonobservation_ibfk_1`
|
|
507
|
FOREIGN KEY (`DBPlotID` )
|
|
508
|
REFERENCES `default_schema`.`PlotMetaDataDimension` (`DBPlotID` )
|
|
509
|
ON DELETE CASCADE
|
|
510
|
ON UPDATE CASCADE,
|
|
511
|
CONSTRAINT `taxonobservation_ibfk_2`
|
|
512
|
FOREIGN KEY (`DBSourceID` )
|
|
513
|
REFERENCES `default_schema`.`SpecimenSourceData` (`DBSourceID` )
|
|
514
|
ON DELETE CASCADE
|
|
515
|
ON UPDATE CASCADE)
|
|
516
|
ENGINE = InnoDB
|
|
517
|
DEFAULT CHARACTER SET = utf8
|
|
518
|
COLLATE = utf8_bin;
|
|
519
|
|
|
520
|
|
|
521
|
-- -----------------------------------------------------
|
|
522
|
-- Table `default_schema`.`TraitObservation`
|
|
523
|
-- -----------------------------------------------------
|
|
524
|
CREATE TABLE IF NOT EXISTS `default_schema`.`TraitObservation` (
|
|
525
|
`TraitObservationID` INT(11) UNSIGNED NOT NULL AUTO_INCREMENT ,
|
|
526
|
`TaxonomyID` INT(11) NOT NULL ,
|
|
527
|
`Family` VARCHAR(100) NULL DEFAULT NULL ,
|
|
528
|
`Genus` VARCHAR(100) NULL DEFAULT NULL ,
|
|
529
|
`SpecificEpithet` VARCHAR(100) NULL DEFAULT NULL ,
|
|
530
|
`InfraspecificRank` VARCHAR(25) NULL DEFAULT NULL ,
|
|
531
|
`InfraspecificEpithet` VARCHAR(100) NULL DEFAULT NULL ,
|
|
532
|
`Taxon` VARCHAR(255) NULL DEFAULT NULL ,
|
|
533
|
`AuthorOfScientificName` VARCHAR(255) NULL DEFAULT NULL ,
|
|
534
|
`TaxonAuthor` VARCHAR(255) NULL DEFAULT NULL ,
|
|
535
|
`Habit` VARCHAR(50) NULL DEFAULT NULL ,
|
|
536
|
`TraitName` VARCHAR(200) NULL DEFAULT NULL ,
|
|
537
|
`TraitValue` VARCHAR(100) NULL DEFAULT NULL ,
|
|
538
|
`Unit` VARCHAR(100) NULL DEFAULT NULL ,
|
|
539
|
`Method` VARCHAR(255) NULL DEFAULT NULL ,
|
|
540
|
`Region` VARCHAR(100) NULL DEFAULT NULL ,
|
|
541
|
`Country` VARCHAR(100) NULL DEFAULT NULL ,
|
|
542
|
`StateProvince` VARCHAR(100) NULL DEFAULT NULL ,
|
|
543
|
`LowerPolitical` VARCHAR(100) NULL DEFAULT NULL ,
|
|
544
|
`LocalityDescription` VARCHAR(100) NULL DEFAULT NULL ,
|
|
545
|
`VerbatimLatitude` VARCHAR(150) NULL DEFAULT NULL ,
|
|
546
|
`VerbatimLongitude` VARCHAR(150) NULL DEFAULT NULL ,
|
|
547
|
`VerbatimElevation` VARCHAR(150) NULL DEFAULT NULL ,
|
|
548
|
`Source` VARCHAR(100) NULL DEFAULT NULL ,
|
|
549
|
`URLSource` VARCHAR(100) NULL DEFAULT NULL ,
|
|
550
|
`SourceCitation` VARCHAR(1000) NULL DEFAULT NULL ,
|
|
551
|
`SourceID` VARCHAR(255) NULL DEFAULT NULL ,
|
|
552
|
`VisitingDate` VARCHAR(100) NULL DEFAULT NULL ,
|
|
553
|
`ReferenceID` INT(11) UNSIGNED NULL DEFAULT NULL ,
|
|
554
|
`Access` VARCHAR(100) NULL DEFAULT NULL ,
|
|
555
|
`Project_PI` VARCHAR(255) NULL DEFAULT NULL ,
|
|
556
|
`Project_PI_contact` VARCHAR(100) NULL DEFAULT NULL ,
|
|
557
|
`Observation` VARCHAR(255) NULL DEFAULT NULL ,
|
|
558
|
`Authorship` VARCHAR(255) NULL DEFAULT NULL ,
|
|
559
|
`AuthorshipContact` VARCHAR(100) NULL DEFAULT NULL ,
|
|
560
|
PRIMARY KEY (`TraitObservationID`) ,
|
|
561
|
INDEX `TaxonomyID` (`TaxonomyID` ASC) ,
|
|
562
|
INDEX `Family` (`Family` ASC) ,
|
|
563
|
INDEX `Taxon` (`Taxon` ASC) ,
|
|
564
|
INDEX `TraitName` (`TraitName` ASC) ,
|
|
565
|
INDEX `ReferenceID` (`ReferenceID` ASC) ,
|
|
566
|
INDEX `TaxonAuthor` (`TaxonAuthor` ASC) ,
|
|
567
|
CONSTRAINT `traitobservation_ibfk_1`
|
|
568
|
FOREIGN KEY (`TaxonomyID` )
|
|
569
|
REFERENCES `default_schema`.`TaxonDimension` (`TaxonomyID` )
|
|
570
|
ON DELETE CASCADE
|
|
571
|
ON UPDATE CASCADE)
|
|
572
|
ENGINE = InnoDB
|
|
573
|
DEFAULT CHARACTER SET = utf8,
|
|
574
|
COMMENT = 'Species trait observations' ;
|
|
575
|
|
|
576
|
|
|
577
|
-- -----------------------------------------------------
|
|
578
|
-- Table `default_schema`.`viewFullOccurrence`
|
|
579
|
-- -----------------------------------------------------
|
|
580
|
CREATE TABLE IF NOT EXISTS `default_schema`.`viewFullOccurrence` (
|
|
581
|
`OccurID` INT(11) NOT NULL AUTO_INCREMENT ,
|
|
582
|
`DBPlotID` INT(11) NOT NULL ,
|
|
583
|
`ObservationID` INT(11) NULL DEFAULT NULL ,
|
|
584
|
`Family` VARCHAR(64) NULL DEFAULT NULL ,
|
|
585
|
`TaxonomyID` INT(11) NOT NULL ,
|
|
586
|
`OrigGenus` VARCHAR(64) NULL DEFAULT NULL ,
|
|
587
|
`OrigSpecies` VARCHAR(64) NULL DEFAULT NULL ,
|
|
588
|
`TaxonCorrected` VARCHAR(250) NULL DEFAULT NULL ,
|
|
589
|
`Genus` VARCHAR(64) NULL DEFAULT NULL ,
|
|
590
|
`Species` VARCHAR(64) NULL DEFAULT NULL ,
|
|
591
|
`Latin` VARCHAR(64) NULL DEFAULT NULL ,
|
|
592
|
`Rank` VARCHAR(16) NULL DEFAULT NULL ,
|
|
593
|
`Accepted` VARCHAR(2) NULL DEFAULT NULL ,
|
|
594
|
`TaxonMorphoSpecies` VARCHAR(255) NULL DEFAULT NULL ,
|
|
595
|
`isCultivated` INT(1) NULL DEFAULT '0' ,
|
|
596
|
`isCultivatedReason` VARCHAR(255) NULL DEFAULT NULL ,
|
|
597
|
`CountryOrig` VARCHAR(100) NULL DEFAULT NULL ,
|
|
598
|
`CountryStd` VARCHAR(150) NULL DEFAULT NULL ,
|
|
599
|
`CountryError` DOUBLE NULL DEFAULT NULL ,
|
|
600
|
`ProvinceStd` VARCHAR(64) NULL DEFAULT NULL ,
|
|
601
|
`ProvinceError` DOUBLE NULL DEFAULT NULL ,
|
|
602
|
`County` VARCHAR(64) NULL DEFAULT NULL ,
|
|
603
|
`Plot` VARCHAR(32) NULL DEFAULT NULL ,
|
|
604
|
`PlotArea` VARCHAR(10) NULL DEFAULT NULL ,
|
|
605
|
`Latitude` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
606
|
`Longitude` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
607
|
`isValidLatLong` INT(1) NULL DEFAULT NULL ,
|
|
608
|
`Date` DATE NULL DEFAULT NULL ,
|
|
609
|
`SurveyType` VARCHAR(10) NULL DEFAULT NULL ,
|
|
610
|
`Abund` INT(11) NULL DEFAULT NULL ,
|
|
611
|
`Abund1` INT(11) NULL DEFAULT NULL ,
|
|
612
|
`Abund2.5` INT(11) NULL DEFAULT NULL ,
|
|
613
|
`Abund10` INT(11) NULL DEFAULT NULL ,
|
|
614
|
`PctCover` DECIMAL(10,5) NULL DEFAULT NULL ,
|
|
615
|
`DataSource` VARCHAR(128) NULL DEFAULT NULL ,
|
|
616
|
PRIMARY KEY (`OccurID`) ,
|
|
617
|
INDEX `DBPlotID` (`DBPlotID` ASC) ,
|
|
618
|
INDEX `ObservationID` (`ObservationID` ASC) ,
|
|
619
|
INDEX `Family` (`Family`(16) ASC) ,
|
|
620
|
INDEX `TaxonCorrected` (`TaxonCorrected`(25) ASC) ,
|
|
621
|
INDEX `Latin` (`Latin`(25) ASC) ,
|
|
622
|
INDEX `TaxonomyID` (`TaxonomyID` ASC) ,
|
|
623
|
INDEX `Genus` (`Genus`(16) ASC) ,
|
|
624
|
INDEX `Species` (`Species`(20) ASC) ,
|
|
625
|
INDEX `ORIGLATIN` (`OrigGenus`(16) ASC, `OrigSpecies`(20) ASC) ,
|
|
626
|
INDEX `CountryStd` (`CountryStd` ASC) ,
|
|
627
|
INDEX `SurveyType` (`SurveyType` ASC) ,
|
|
628
|
INDEX `DataSource` (`DataSource` ASC) ,
|
|
629
|
INDEX `Rank` (`Rank` ASC) ,
|
|
630
|
INDEX `Accepted` (`Accepted` ASC) ,
|
|
631
|
INDEX `isCultivated` (`isCultivated` ASC) ,
|
|
632
|
INDEX `isCultivatedReason` (`isCultivatedReason` ASC) ,
|
|
633
|
INDEX `isValidLatLong` (`isValidLatLong` ASC) ,
|
|
634
|
INDEX `CountryError` (`CountryError` ASC) ,
|
|
635
|
INDEX `ProvinceError` (`ProvinceError` ASC) ,
|
|
636
|
CONSTRAINT `viewFullOccurrence_ibfk_1`
|
|
637
|
FOREIGN KEY (`ObservationID` )
|
|
638
|
REFERENCES `default_schema`.`IndividualObservation` (`ObservationID` )
|
|
639
|
ON DELETE CASCADE
|
|
640
|
ON UPDATE CASCADE,
|
|
641
|
CONSTRAINT `viewFullOccurrence_ibfk_3`
|
|
642
|
FOREIGN KEY (`DBPlotID` )
|
|
643
|
REFERENCES `default_schema`.`PlotMetaDataDimension` (`DBPlotID` )
|
|
644
|
ON DELETE CASCADE
|
|
645
|
ON UPDATE CASCADE,
|
|
646
|
CONSTRAINT `viewFullOccurrence_ibfk_2`
|
|
647
|
FOREIGN KEY (`TaxonomyID` )
|
|
648
|
REFERENCES `default_schema`.`TaxonDimension` (`TaxonomyID` )
|
|
649
|
ON DELETE CASCADE
|
|
650
|
ON UPDATE CASCADE)
|
|
651
|
ENGINE = InnoDB
|
|
652
|
DEFAULT CHARACTER SET = utf8;
|
|
653
|
|
|
654
|
|
|
655
|
|
|
656
|
SET SQL_MODE=@OLD_SQL_MODE;
|
|
657
|
SET FOREIGN_KEY_CHECKS=@OLD_FOREIGN_KEY_CHECKS;
|
|
658
|
SET UNIQUE_CHECKS=@OLD_UNIQUE_CHECKS;
|
