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Task #935

closed

TNRS crashes when scrubbing names with two infraspecific epithets

Added by Aaron Marcuse-Kubitza over 10 years ago. Updated over 10 years ago.

Status:
Resolved
Priority:
High
Assignee:
Aaron Marcuse-Kubitza
Start date:
06/04/2014
Due date:
% Done:

100%

Estimated time:
Activity type:

Description

problem

the error occurs on this name:

Lamiaceae Agastache pallidiflora (Heller) Rydb. spp. pallidiflora var. gilensis R.W. Sanders

but not with one of the two infraspecific epithets removed:

Lamiaceae Agastache pallidiflora (Heller) Rydb. spp. pallidiflora R.W. Sanders
Lamiaceae Agastache pallidiflora (Heller) Rydb. var. gilensis R.W. Sanders

the problem is indicated by an Internal Server Error, with the web interface returning the following error message: "There was an error processing your list. Please contact support for further help."

this has been reported on GitHub, and Naim, Nicole, and iPlant support have been e-mailed.

fix

workaround: filter out unsafe taxon names

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 #1

Updated by Aaron Marcuse-Kubitza over 10 years ago

  • Description updated (diff)
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 #2

Updated by Aaron Marcuse-Kubitza over 10 years ago

  • Description updated (diff)
  • Assignee set to Aaron Marcuse-Kubitza
  • % Done changed from 0 to 50

a workaround has been implemented that filters out unsafe taxon names. however, the unsafe names are hardcoded, so a more automated solution is needed to detect all instances of two infraspecific epithets.

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 #3

Updated by Aaron Marcuse-Kubitza over 10 years ago

  • Status changed from New to Resolved
  • % Done changed from 50 to 100

iPlant fixed this

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