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Task #917

Updated by Aaron Marcuse-Kubitza over 10 years ago

From Brad: 

 I’ve given some thought to the TPL matter. The algorithm isn’t hard, but Aaron will have to do the sorting himself. 

 1. -Make sure sources are selected in the following order: GCC, TPL, Tropicos, USDA- 
 2. -When downloading names, do NOT sort by source _(ie. don't limit results to just the best match when sorted by source)_- 
 3. -Download all results (not just best matches)- 
 3a. -fix anomaly where there were multiple @Selected@ names for some input names (to avoid breaking constraints)- 
 3b. reimplement the parsed-rank columns for the all-matches strategy, which does not have a single scrubbed name per input name to parse 
 3c. -create table and algorithm to store a selected best match for each input name- 
 4. -Apply the usual TNRS sort order to the matches for a give name.- 
 Aaron, Brad said there are no additional steps to apply here (in step 4). Just proceed to step 5. (--Martha) (-Martha) 
 5. If the best match (indicated by Selected=TRUE) has source=Tropicos and acceptance=accepted AND another match is available where source<is not equal to>Tropicos and acceptance=synonym, use the latter name (we don't need this until after the names are scrubbed (Martha)) 
 _what about when the @Selected@ best match is a homonym? should we then use a non-Selected match?_ 
 6. -All other cases, use the best match as flagged- 

 That should filter out most Tropicos nomenclatural synonyms incorrectly labeled accepted. I can unpack #4 for Aaron when the time arrives. 

 Brad

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