Activity
From 08/06/2012 to 09/04/2012
08/31/2012
- 06:55 PM Task #486 (New): add unit-conversion mechanism
- * This is primarily needed for DBH, plot area, and elevation/depth
* Make quantities with units be a tuple type cont... - 02:34 PM Task #485 (New): track data provider's citation requirements in VegBIEN
- * Some providers require them to be cited on any analysis that's conducted with their data:
** "Forest Plots Databas... - 02:08 PM Task #483 (Rejected): rename staging table columns according to map.csv
- Reinstalling staging tables whenever a mapping changes is not a good idea.
Renaming will instead continue to occur d...
08/30/2012
- 08:49 AM Task #484 (Resolved): support installing staging tables directly from a MySQL export
- * requires (re-)exporting MySQL DB with "@--compatible=postgresql@":http://dev.mysql.com/doc/refman/5.6/en/mysqldump....
08/29/2012
- 04:16 PM Task #483 (Resolved): rename staging table columns according to map.csv
- * This will allow us to have just one VegCore-VegBIEN mapping, with each staging table already using VegCore column n...
08/28/2012
- 06:57 PM Task #482 (New): translate README.TXT to wiki page
- * This will provide easy-to-read formatting to what is currently a plain text file
- 06:31 PM Task #464 (Resolved): reverse XPaths so that they start with location instead of plantobservation or specimenreplicate
- > CTFS's two test rows needed to be disabled because they require a transformation of the new mappings
CTFS is bei... - 06:30 PM Task #471 (Resolved): add make actions so new dependent maps are rebuilt automatically when their source map changes
- This appears to be fixed now that the primary map refactoring is done and the symlinks are gone
- 06:29 PM Task #458 (Resolved): map all VegX sources to stems table
- 06:28 PM Task #452 (Resolved): add column-based import to automated testing
- @make test by_col=1@
08/27/2012
- 05:51 PM Task #480 (Resolved): automate adding a new table to an existing datasource
- @make inputs/<datasrc>/<table>/add@
08/24/2012
08/23/2012
- 01:44 PM Task #477 (Rejected): allow putting specimens data directly in the top level of the datasource directory
- * this avoids needing to create a single @specimens@ subdir for the DwC CSV
* need to work around make's autoremoval... - 01:39 PM Task #476 (New): develop map spreadsheet -> header override file translation utility
- * this will avoid the need to create a @map.full.csv@ and @VegBIEN.csv@ file for each table, because @mappings/Veg+-V...
08/17/2012
- 07:20 PM Task #474 (Rejected): use svn to figure out when a map file has changed and needs to be cleaned up
- * Currently, a separate @.last_cleanup@ file is used as a timestamp.
This is problematic, because whenever a map fil...
08/15/2012
08/14/2012
- 10:57 PM Task #473 (Resolved): use _merge instead of _alt to avoid losing source data on import
- * _alt only preserves one of several alternative fields, while _merge concatenates them
* Important: _alt is still n...
08/09/2012
- 05:02 PM Task #458: map all VegX sources to stems table
- * VegX sources have been mapped to @VegCSV-VegBIEN.specimens.csv@, which for now is copied to produce the other table...
- 03:58 PM Task #383: convert VegBank data dictionary to database comments
- Have URLs to VegBank data dictionary pages for *[[VegCSV]]* terms in "*mappings/VegCSV-VegBIEN.specimens.csv*":https:...
- 12:18 PM Task #472 (Rejected): replace accessioncodes with datasource_id+sourceaccessioncode
- * If we autopopulate the sourceaccessioncode using other input data (as some mappings do already), the datasource_id+...
- 11:59 AM Task #471 (Resolved): add make actions so new dependent maps are rebuilt automatically when their source map changes
- * Currently, you have to run @make mappings/@ in addition to @make test@ after any mappings changes
* Before VegCSV,...
08/08/2012
- 08:39 PM Task #470 (Resolved): source terms from old versions of DwC to the DwC history page
- * "DwC history page":http://rs.tdwg.org/dwc/terms/history/index.htm
* This will provide an automatic link to the des... - 04:27 PM Task #469 (New): give everyone their own account on vegbien
- * Replaces less secure shared password
* Ideally, get PostgreSQL to use the Linux password hashes on vegbiendev:
**... - 04:25 PM Task #468 (Resolved): rename/delete and recreate public schema in one transaction
- * This ensures that an instance of the current public schema is always available
08/06/2012
- 11:15 PM Task #366 (Rejected): refactor VegX
- We're switching to *[[VegCSV]]*, so this is no longer necessary
- 11:14 PM Task #332 (Rejected): switch to VegX 1.5.3
- We're switching to *[[VegCSV]]* instead
- 11:13 PM Task #467 (New): underline all to do items in meetings notes
- * This will make it easy to see not only which items are done (crossed out), but also which remain
- 09:33 PM Task #464: reverse XPaths so that they start with location instead of plantobservation or specimenreplicate
- All XPaths have been reversed. However, CTFS's two test rows needed to be disabled because they require a transformat...
- 09:24 PM Task #466 (Rejected): column-based import: avoid most exceptions by introspecting the DB structure instead of waiting for a parseable exception to be raised
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