COMMENT ON SCHEMA "public.test_taxonomic_names" IS 'Version: public (2013-7-24 15:11:57 PDT)';

    SELECT source.shortname AS datasource, sourcelist.name AS "institutionCode", specimenreplicate.collectioncode_dwc AS "collectionCode", specimenreplicate.catalognumber_dwc AS "catalogNumber", specimenreplicate.sourceaccessioncode AS "occurrenceID", canon_place.country, canon_place.stateprovince AS "stateProvince", datasource_place.county, location.locationnarrative AS locality, CASE WHEN (coordinates.latitude_deg IS NOT NULL) THEN coordinates.latitude_deg ELSE county_centroids.latitude END AS "decimalLatitude", CASE WHEN (coordinates.latitude_deg IS NOT NULL) THEN coordinates.longitude_deg ELSE county_centroids.longitude END AS "decimalLongitude", CASE WHEN (coordinates.latitude_deg IS NOT NULL) THEN coordinates.coordsaccuracy_m ELSE _km_to_m(county_centroids.error_km) END AS "coordinateUncertaintyInMeters", CASE WHEN (coordinates.latitude_deg IS NOT NULL) THEN 'source data'::coordinatesource WHEN (county_centroids.row_num IS NOT NULL) THEN 'georeferencing'::coordinatesource ELSE NULL::coordinatesource END AS "coordinateSource_bien", CASE WHEN (coordinates.latitude_deg IS NOT NULL) THEN NULL::text WHEN (county_centroids.row_num IS NOT NULL) THEN 'county centroid'::text ELSE NULL::text END AS "georeferenceProtocol_bien", (canon_place.geovalid)::integer AS geovalid_bien, ("newWorldCountries"."isNewWorld")::integer AS "isNewWorld_bien", COALESCE(project.sourceaccessioncode, project.projectname) AS "projectID", COALESCE(location.sourceaccessioncode, NULLIF(pg_catalog.concat_ws('; '::text, COALESCE(parent_location.sourceaccessioncode, parent_location.authorlocationcode), location.authorlocationcode), ''::text)) AS "locationID", COALESCE(parent_location.authorlocationcode, location.authorlocationcode) AS "locationName", CASE WHEN (parent_location.location_id IS NOT NULL) THEN location.authorlocationcode ELSE NULL::text END AS subplot, plantobservation.authorplantcode AS "individualCode", COALESCE(location.elevation_m, parent_location.elevation_m) AS "elevationInMeters", _m2_to_ha(COALESCE(location.area_m2, parent_location.area_m2)) AS "plotArea_ha", method.name AS "samplingProtocol", COALESCE(locationevent.temperature_c, parent_event.temperature_c) AS "temperature_C", COALESCE(locationevent.precipitation_m, parent_event.precipitation_m) AS precipitation_m, collector.fullname AS "recordedBy", plantobservation.authorplantcode AS "recordNumber", COALESCE(locationevent.obsstartdate, parent_event.obsstartdate, aggregateoccurrence.collectiondate) AS "dateCollected", taxonverbatim.family AS family_verbatim, COALESCE(taxonverbatim.taxonomicname, NULLIF(pg_catalog.concat_ws(' '::text, taxonverbatim.taxonname, taxonverbatim.author), ''::text), taxonlabel.taxonomicname) AS "scientificName_verbatim", identifiedby.fullname AS "identifiedBy", taxondetermination.determinationdate AS "dateIdentified", taxondetermination.notes AS "identificationRemarks", "ScrubbedTaxon"."matchedFamily" AS family_matched, "ScrubbedTaxon"."matchedTaxonName" AS "taxonName_matched", "ScrubbedTaxon"."matchedScientificNameAuthorship" AS "scientificNameAuthorship_matched", family_higher_plant_group.higher_plant_group AS "higherPlantGroup_bien", "ScrubbedTaxon"."acceptedFamily" AS family, "ScrubbedTaxon"."acceptedGenus" AS genus, COALESCE(COALESCE(NULLIF(pg_catalog.concat_ws(' '::text, COALESCE("ScrubbedTaxon"."acceptedGenus", "ScrubbedTaxon"."acceptedFamily"), "ScrubbedTaxon"."acceptedSpecificEpithet", "ScrubbedTaxon"."morphospeciesSuffix"), ''::text), "ScrubbedTaxon"."acceptedTaxonName"), COALESCE(NULLIF(pg_catalog.concat_ws(' '::text, COALESCE("ScrubbedTaxon"."matchedGenus", "ScrubbedTaxon"."matchedFamily"), "ScrubbedTaxon"."matchedSpecificEpithet", "ScrubbedTaxon"."morphospeciesSuffix"), ''::text), "ScrubbedTaxon"."matchedTaxonName"), "ScrubbedTaxon"."concatenatedScientificName") AS "speciesBinomialWithMorphospecies", "ScrubbedTaxon"."acceptedTaxonName" AS "taxonName", "ScrubbedTaxon"."acceptedScientificNameAuthorship" AS "scientificNameAuthorship", taxonoccurrence.growthform AS "growthForm", plantobservation.reproductivecondition AS "reproductiveCondition", ((threatened_taxonlabel.taxonlabel_id IS NOT NULL))::integer AS threatened_bien, (((cultivated_family_locations.country IS NOT NULL) OR _or(taxonoccurrence.iscultivated, location.iscultivated)))::integer AS cultivated_bien, CASE WHEN (taxonoccurrence.iscultivated IS NOT NULL) THEN taxonoccurrence.cultivatedbasis WHEN (location.iscultivated IS NOT NULL) THEN NULL::text ELSE NULL::text END AS "cultivatedBasis_bien", aggregateoccurrence.notes AS "occurrenceRemarks", _fraction_to_percent(aggregateoccurrence.cover_fraction) AS "coverPercent", _m_to_cm(stemobservation.diameterbreastheight_m) AS "diameterBreastHeight_cm", stemobservation.height_m, stemobservation.tag, stemobservation.xposition_m AS "organismX_m", stemobservation.yposition_m AS "organismY_m", taxonoccurrence.sourceaccessioncode AS "taxonOccurrenceID", taxonoccurrence.authortaxoncode AS "authorTaxonCode", plantobservation.sourceaccessioncode AS "individualObservationID", stemobservation.authorstemcode AS "authorStemCode" FROM ((((((((((((((((((((((((((((source JOIN location USING (source_id)) LEFT JOIN locationevent USING (location_id)) LEFT JOIN location parent_location ON ((parent_location.location_id = location.parent_id))) LEFT JOIN locationplace ON ((locationplace.location_id = COALESCE(parent_location.location_id, location.location_id)))) LEFT JOIN place datasource_place USING (place_id)) LEFT JOIN place canon_place ON ((canon_place.place_id = datasource_place.canon_place_id))) LEFT JOIN coordinates ON ((coordinates.coordinates_id = canon_place.coordinates_id))) LEFT JOIN "newWorld".iso_code_gadm ON ((iso_code_gadm."*GADM country" = canon_place.country))) LEFT JOIN "newWorld"."newWorldCountries" ON (("newWorldCountries"."*isoCode" = iso_code_gadm."*2-digit iso code"))) LEFT JOIN geoscrub.county_centroids ON ((((canon_place.country = 'United States'::text) AND (county_centroids.state = canon_place.stateprovince)) AND (county_centroids.county = canon_place.county)))) LEFT JOIN taxonoccurrence USING (locationevent_id)) LEFT JOIN locationevent parent_event ON ((parent_event.locationevent_id = locationevent.parent_id))) LEFT JOIN project ON ((project.project_id = COALESCE(locationevent.project_id, parent_event.project_id)))) LEFT JOIN method ON ((method.method_id = COALESCE(locationevent.method_id, parent_event.method_id)))) LEFT JOIN party collector ON ((collector.party_id = taxonoccurrence.collector_id))) LEFT JOIN aggregateoccurrence USING (taxonoccurrence_id)) LEFT JOIN plantobservation USING (aggregateoccurrence_id)) LEFT JOIN stemobservation USING (plantobservation_id)) LEFT JOIN specimenreplicate USING (plantobservation_id)) LEFT JOIN sourcelist ON ((sourcelist.sourcelist_id = specimenreplicate.institution_id))) LEFT JOIN taxondetermination ON (((taxondetermination.taxonoccurrence_id = taxonoccurrence.taxonoccurrence_id) AND taxondetermination.is_datasource_current))) LEFT JOIN party identifiedby ON ((identifiedby.party_id = taxondetermination.party_id))) LEFT JOIN taxonverbatim USING (taxonverbatim_id)) LEFT JOIN taxonlabel USING (taxonlabel_id)) LEFT JOIN "TNRS"."ScrubbedTaxon" ON (("ScrubbedTaxon"."concatenatedScientificName" = taxonlabel.taxonomicname))) LEFT JOIN family_higher_plant_group ON ((family_higher_plant_group.family = "ScrubbedTaxon"."acceptedFamily"))) LEFT JOIN cultivated_family_locations ON (((cultivated_family_locations.family = "ScrubbedTaxon"."acceptedFamily") AND (cultivated_family_locations.country = canon_place.country)))) LEFT JOIN threatened_taxonlabel USING (taxonlabel_id)) ORDER BY source.shortname;

    SELECT geoscrub_input.country, geoscrub_input."stateProvince", geoscrub_input.county, geoscrub_input."decimalLatitude", geoscrub_input."decimalLongitude" FROM (geoscrub_input LEFT JOIN geoscrub.geoscrub_output ON ((((((geoscrub_output."decimalLatitude" = geoscrub_input."decimalLatitude") AND (geoscrub_output."decimalLongitude" = geoscrub_input."decimalLongitude")) AND (geoscrub_output.country = geoscrub_input.country)) AND (geoscrub_output."stateProvince" = geoscrub_input."stateProvince")) AND (geoscrub_output.county = geoscrub_input.county)))) WHERE (geoscrub_output."*row_num" IS NULL);

SELECT pg_catalog.setval('source_source_id_seq', 77, true);

1	\N	\N	TNRS	\N	aggregator	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N

2	\N	\N	test_taxonomic_names	\N	personal communication	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N

2	2	1	\N	2	\N	\N	\N	\N	Poa annua

4	2	2	\N	4	\N	\N	\N	\N	Poa annua L.

6	2	3	\N	6	\N	\N	\N	\N	Poa annua var. eriolepis

8	2	4	\N	8	\N	\N	\N	\N	Poa annua subsp. exilis

10	2	5	\N	10	\N	\N	\N	\N	Poa annua ssp. exilis

12	2	6	\N	12	\N	\N	\N	\N	Poa annua subvar. minima

14	2	7	\N	14	\N	\N	\N	\N	Poa annua fo. lanuginosa

16	2	8	\N	16	\N	\N	\N	\N	Silene scouleri subsp. pringlei var. grisea C.L. Hitchc. & Maguire

18	2	9	\N	18	\N	\N	\N	\N	Silene scouleri Hook. subsp. pringlei (S. Watson) C.L. Hitchc. & Maguire var. grisea C.L. Hitchc. & Maguire

20	2	10	\N	20	\N	\N	\N	\N	Fabaceae Inga sp.3

22	2	11	\N	22	\N	\N	\N	\N	Fabaceae Inga "fuzzy leaf"

24	2	12	\N	24	\N	\N	\N	\N	Fabaceae unknown #2

26	2	13	\N	26	\N	\N	\N	\N	Fabaceae Boyle#6500

28	2	14	\N	28	\N	\N	\N	\N	Fam_indet. Boyle#6501

30	2	15	\N	30	\N	\N	\N	\N	Compositae indet. sp.1

2	2	2	\N	\N	Poa annua	\N	\N	\N	\N	\N	\N	\N	\N

4	2	4	\N	\N	Poa annua L.	\N	\N	\N	\N	\N	\N	\N	\N

6	2	6	\N	\N	Poa annua var. eriolepis	\N	\N	\N	\N	\N	\N	\N	\N

8	2	8	\N	\N	Poa annua subsp. exilis	\N	\N	\N	\N	\N	\N	\N	\N

10	2	10	\N	\N	Poa annua ssp. exilis	\N	\N	\N	\N	\N	\N	\N	\N

12	2	12	\N	\N	Poa annua subvar. minima	\N	\N	\N	\N	\N	\N	\N	\N

14	2	14	\N	\N	Poa annua fo. lanuginosa	\N	\N	\N	\N	\N	\N	\N	\N

16	2	16	\N	\N	Silene scouleri subsp. pringlei var. grisea C.L. Hitchc. & Maguire	\N	\N	\N	\N	\N	\N	\N	\N

18	2	18	\N	\N	Silene scouleri Hook. subsp. pringlei (S. Watson) C.L. Hitchc. & Maguire var. grisea C.L. Hitchc. & Maguire	\N	\N	\N	\N	\N	\N	\N	\N

20	2	20	\N	\N	Fabaceae Inga sp.3	\N	\N	\N	\N	\N	\N	\N	\N

22	2	22	\N	\N	Fabaceae Inga "fuzzy leaf"	\N	\N	\N	\N	\N	\N	\N	\N

24	2	24	\N	\N	Fabaceae unknown #2	\N	\N	\N	\N	\N	\N	\N	\N

26	2	26	\N	\N	Fabaceae Boyle#6500	\N	\N	\N	\N	\N	\N	\N	\N

28	2	28	\N	\N	Fam_indet. Boyle#6501	\N	\N	\N	\N	\N	\N	\N	\N

30	2	30	\N	\N	Compositae indet. sp.1	\N	\N	\N	\N	\N	\N	\N	\N