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Revision 10944

Added by Aaron Marcuse-Kubitza about 11 years ago

inputs/VegBank/: prepended the table name to each column name to prevent column collisions, using the steps at http://wiki.vegpath.org/Left-joining_a_datasource

View differences:

map.csv
1 1 
VegBank,VegCore,Filter,Comments
2 
plantname_id,*plantname_id,,
3 
plantconcept_id,*plantconcept_id,,
2 
plantname_id,*taxonobservation_--plantname_id,,
3 
plantconcept_id,*taxonobservation_--plantconcept_id,,
4 4 
taxonobservation_id,taxonOccurrenceID,,
5 5 
observation_id,eventID,,
6 6 
authorplantname,originalScientificName,,
7 
taxonobservation_reference_id,*taxonobservation_reference_id,,
8 
taxoninferencearea,*taxoninferencearea,,
9 
emb_taxonobservation,*emb_taxonobservation,,
10 
int_origplantconcept_id,*int_origplantconcept_id,,
7 
taxonobservation_reference_id,*taxonobservation_--taxonobservation_reference_id,,
8 
taxoninferencearea,*taxonobservation_--taxoninferencearea,,
9 
emb_taxonobservation,*taxonobservation_--emb_taxonobservation,,
10 
int_origplantconcept_id,*taxonobservation_--int_origplantconcept_id,,
11 11 
int_origplantscifull,EQUIV#to:authorplantname#int_origplantscifull,, = originalScientificName_scrubbed
12 12 
int_origplantscinamenoauth,originalTaxonName,,
13 13 
int_origplantcommon,originalVernacularName,,
14 
int_origplantcode,*int_origplantcode,,
15 
int_currplantconcept_id,*int_currplantconcept_id,,
14 
int_origplantcode,*taxonobservation_--int_origplantcode,,
15 
int_currplantconcept_id,*taxonobservation_--int_currplantconcept_id,,
16 16 
int_currplantscifull,scientificName_verbatim,,
17 17 
int_currplantscinamenoauth,taxonName,,
18 18 
int_currplantcommon,vernacularName,,
19 
int_currplantcode,*int_currplantcode,,
20 
taxonobservation_accessioncode,*taxonobservation_accessioncode,,
21 
taxoninterpretation_id,*taxoninterpretation_id,,
22 
stemlocation_id,*stemlocation_id,,
23 
taxoninterpretation_plantname_id,*taxoninterpretation_plantname_id,,
24 
taxoninterpretation_party_id,*taxoninterpretation_party_id,,
25 
role_id,*role_id,,
19 
int_currplantcode,*taxonobservation_--int_currplantcode,,
20 
taxonobservation_accessioncode,*taxonobservation_--taxonobservation_accessioncode,,
21 
taxoninterpretation_id,*taxonobservation_--taxoninterpretation_id,,
22 
stemlocation_id,*taxonobservation_--stemlocation_id,,
23 
taxoninterpretation_plantname_id,*taxonobservation_--taxoninterpretation_plantname_id,,
24 
taxoninterpretation_party_id,*taxonobservation_--taxoninterpretation_party_id,,
25 
role_id,*taxonobservation_--role_id,,
26 26 
interpretationtype,identificationType,,
27 
reference_id,*reference_id,,
28 
originalinterpretation,*originalinterpretation,,
29 
currentinterpretation,*currentinterpretation,,
27 
reference_id,*taxonobservation_--reference_id,,
28 
originalinterpretation,*taxonobservation_--originalinterpretation,,
29 
currentinterpretation,*taxonobservation_--currentinterpretation,,
30 30 
taxonfit,identificationQualifier,,
31 31 
taxonconfidence,identificationVerificationStatus,,
32 32 
collector_id,UNUSED#collector_id,,
33 33 
collectionnumber,collectorNumber,,
34 
museum_id,*museum_id,,
34 
museum_id,*taxonobservation_--museum_id,,
35 35 
museumaccessionnumber,accessionNumber,,
36 
grouptype,*grouptype,,
36 
grouptype,*taxonobservation_--grouptype,,
37 37 
notes,occurrenceRemarks,,
38 
notespublic,*notespublic,,
39 
notesmgt,*notesmgt,,
40 
revisions,*revisions,,
38 
notespublic,*taxonobservation_--notespublic,,
39 
notesmgt,*taxonobservation_--notesmgt,,
40 
revisions,*taxonobservation_--revisions,,
41 41 
interpretationdate,dateIdentified,,
42 42 
collectiondate,dateCollected,,
43 
emb_taxoninterpretation,*emb_taxoninterpretation,,
44 
taxoninterpretation_accessioncode,*taxoninterpretation_accessioncode,,
45 
plantconcept_reference_id,*plantconcept_reference_id,,
43 
emb_taxoninterpretation,*taxonobservation_--emb_taxoninterpretation,,
44 
taxoninterpretation_accessioncode,*taxonobservation_--taxoninterpretation_accessioncode,,
45 
plantconcept_reference_id,*taxonobservation_--plantconcept_reference_id,,
46 46 
plantconcept_plantname,scientificName__for_nearest_taxon_concept,,"when int_currplantscifull also provided, this often leaves out lower ranks. however, int_currplantscifull is not always provided when this is."
47 
plantcode,*plantcode,,
48 
plantdescription,*plantdescription,,
49 
d_obscount,*d_obscount,,
50 
d_currentaccepted,*d_currentaccepted,,
51 
plantconcept_accessioncode,*plantconcept_accessioncode,,
47 
plantcode,*taxonobservation_--plantcode,,
48 
plantdescription,*taxonobservation_--plantdescription,,
49 
d_obscount,*taxonobservation_--d_obscount,,
50 
d_currentaccepted,*taxonobservation_--d_currentaccepted,,
51 
plantconcept_accessioncode,*taxonobservation_--plantconcept_accessioncode,,
52 52 
Kingdom,kingdom,,
53 
Subkingdom,*Subkingdom,,
54 
Superdivision,*Superdivision,,
55 
Division,*Division,,
56 
Subdivision,*Subdivision,,
53 
Subkingdom,*taxonobservation_--Subkingdom,,
54 
Superdivision,*taxonobservation_--Superdivision,,
55 
Division,*taxonobservation_--Division,,
56 
Subdivision,*taxonobservation_--Subdivision,,
57 57 
Class,class,,
58 
Subclass,*Subclass,,
58 
Subclass,*taxonobservation_--Subclass,,
59 59 
Order,order,,
60 60 
Family,family,,
61 61 
Genus,genus,,includes genus author
62 
Species,EQUIV#to:plantname#Species,,*full* taxonomic name at that rank
63 
Subspecies,EQUIV#to:plantname#Subspecies,,*full* taxonomic name at that rank
64 
Variety,EQUIV#to:plantname#Variety,,*full* taxonomic name at that rank
65 
Forma,EQUIV#to:plantname#Forma,,*full* taxonomic name at that rank
62 
Species,EQUIV#to:plantname#Species,,*taxonobservation_--full* taxonomic name at that rank
63 
Subspecies,EQUIV#to:plantname#Subspecies,,*taxonobservation_--full* taxonomic name at that rank
64 
Variety,EQUIV#to:plantname#Variety,,*taxonobservation_--full* taxonomic name at that rank
65 
Forma,EQUIV#to:plantname#Forma,,*taxonobservation_--full* taxonomic name at that rank
66 66 
plantname,DUPLICATE#of:plantconcept_plantname#plantname,,exact duplicate
67 
plantname_reference_id,*plantname_reference_id,,
68 
dateentered,*dateentered,,
67 
plantname_reference_id,*taxonobservation_--plantname_reference_id,,
68 
dateentered,*taxonobservation_--dateentered,,
69 69 
:plot,observationGranularity,,

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