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Revision 1171

mappings: Removed mappings for XML func suffixes of a path because they are now automatically created heuristically by join

View differences:

VegBIEN.specimens.csv
7 7
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
8 8
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy,,89
9 9
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89
10
coordinatePrecision/_noCV/value,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/coordsaccuracy/_noCV/value,,89
11 10
BoundingBox,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
12 11
footprintWKT,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination[!namedplace_id]/footprintgeometry_dwc,,91
13 12
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationnarrative/_alt/1,,68
......
25 24
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[!namedplace_id]/longitude,centerlongitude}/_alt/2/_nullIf:[null=0,type=float]/value",,82
26 25
habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
27 26
Habitat,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/1,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
28
habitat/_merge/1,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/1,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
29 27
Vegetation,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/2,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
30
habitat/_merge/2,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname/_merge/2,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
31 28
Substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
32 29
bien.substrate,/*_id/taxonoccurrence/*_id/locationevent/landscapenarrative,,
33 30
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
34 31
DayCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/day,,44
35
eventDate/_alt/2/_date/day,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/day,,44
36 32
MonthCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/month,,44
37
eventDate/_alt/2/_date/month,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/month,,44
38 33
YearCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/year,,44
39
eventDate/_alt/2/_date/year,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/year,,44
40 34
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
41 35
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
42 36
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
......
47 41
sex,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
48 42
dateIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/determinationdate",,120
49 43
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/determinationdate/_alt/2/_date/day",,120
50
dateIdentified/_alt/2/_date/day,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/determinationdate/_alt/2/_date/day",,120
51 44
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/determinationdate/_alt/2/_date/month",,120
52
dateIdentified/_alt/2/_date/month,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/determinationdate/_alt/2/_date/month",,120
53 45
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/determinationdate/_alt/2/_date/year",,120
54
dateIdentified/_alt/2/_date/year,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]/determinationdate/_alt/2/_date/year",,120
55 46
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]:[determinationtype=Author,iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
56 47
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]:[determinationtype=Author,iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
57 48
ScientificName,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/*_id/plantname/rank=Binomial]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Bob, Nick, please is this mapping OK?",134
......
78 69
collectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
79 70
fieldNotes,/description,,
80 71
Notes,/description/_merge/1,,
81
fieldNotes/_merge/1,/description/_merge/1,,
82 72
PlantFungusDescription,"/description/_merge/2/_label[label=""plant fungus""]/value",,
83
"fieldNotes/_merge/2/_label[label=""plant fungus""]/value","/description/_merge/2/_label[label=""plant fungus""]/value",,
84 73
CatalogNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
85 74
catalogNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
86 75
CollectorNumber,:[datasource_id/party/organizationname/_alt/2=$/_ignore/inLabel]/collectionnumber/_alt/1,,22

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