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Revision 1171

mappings: Removed mappings for XML func suffixes of a path because they are now automatically created heuristically by join

View differences:

DwC2-VegBIEN.specimens.csv
3 3
stateProvince,"//*_id/namedplace[placesystem=""region|state|province""]/placename",,65
4 4
county,//*_id/namedplace[placesystem=county]/placename,,66
5 5
coordinatePrecision,//location/locationdetermination[]/coordsaccuracy,,89
6
coordinatePrecision/_noCV/value,//location/locationdetermination[]/coordsaccuracy/_noCV/value,,89
7 6
footprintWKT,//location/locationdetermination[]/footprintgeometry_dwc,,91
8 7
locality,//location/locationnarrative/_alt/1,,68
9 8
verbatimLocality,//location/locationnarrative/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
......
14 13
decimalLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/longitude,centerlongitude}/_alt/1/_nullIf/value",,86
15 14
verbatimLongitude,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{locationdetermination[]/longitude,centerlongitude}/_alt/2/_nullIf/value",,82
16 15
habitat,//*/commname,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
17
habitat/_merge/1,//*/commname/_merge/1,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
18
habitat/_merge/2,//*/commname/_merge/2,"Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
19 16
bien.substrate,//locationevent/landscapenarrative,,
20 17
eventDate,//locationevent/obsstartdate,,44
21
eventDate/_alt/2/_date/day,//locationevent/obsstartdate/_alt/2/_date/day,,44
22
eventDate/_alt/2/_date/month,//locationevent/obsstartdate/_alt/2/_date/month,,44
23
eventDate/_alt/2/_date/year,//locationevent/obsstartdate/_alt/2/_date/year,,44
24 18
maximumDepthInMeters,//waterdepth/max,,75
25 19
minimumDepthInMeters,//waterdepth/min,,74
26 20
scientificNameAuthorship,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Authority]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
27 21
sex,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Binomial]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
28 22
dateIdentified,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Binomial]/determinationdate",,120
29
dateIdentified/_alt/2/_date/day,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Binomial]/determinationdate/_alt/2/_date/day",,120
30
dateIdentified/_alt/2/_date/month,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Binomial]/determinationdate/_alt/2/_date/month",,120
31
dateIdentified/_alt/2/_date/year,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Binomial]/determinationdate/_alt/2/_date/year",,120
32 23
identifiedBy,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Binomial]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
33 24
scientificName,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Binomial]/*_id/plantconcept/*_id/*/plantname","Brad: Bob, Nick, please is this mapping OK?",134
34 25
class,"//taxonoccurrence/taxondetermination[rolecode=identifier,rank=Class]/*_id/plantconcept/*_id/*/plantname",,144
......
42 33
recordedBy,//taxonoccurrence/verbatimcollectorname,,23
43 34
collectionCode,/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
44 35
fieldNotes,/description,,
45
fieldNotes/_merge/1,/description/_merge/1,,
46
"fieldNotes/_merge/2/_label[label=""plant fungus""]/value","/description/_merge/2/_label[label=""plant fungus""]/value",,
47 36
catalogNumber,/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
48 37
recordNumber,/collectionnumber/_alt/1,,22
49 38
collectionID,/collectionnumber/_alt/2,,9

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