Project

General

Profile

1
CVS,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2
museumAccessionNumber,"/_if[@name=""if specimen""]/cond/_exists",
3
:plot,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/observationtype",
4
:plot,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/cond/_eq:[right=plot]/left",
5
museumAccessionNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
6
museumAccessionNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
7
museumAccessionNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
8
TAXONOBSERVATION_ID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
9
collectionNumber,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
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OBSERVATION_ID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
11
OBSERVATION_ID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/cond/_exists",
12
OBSERVATION_ID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/sourceaccessioncode",
13
OBSERVATION_ID,/location/locationevent/locationevent:[@fkey=parent_id]/sourceaccessioncode,
14
interpretationDate,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/1/_dateRangeStart/value",
15
taxonFit,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit",
16
collectionDate,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
17
notes,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/aggregateoccurrence/notes/_join/1,
18
collectionNumber,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2,
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museumAccessionNumber,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
20
collectionNumber,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/else",
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museumAccessionNumber,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
22
stemLocation_ID,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
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OBSERVATION_ID,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
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stemLocation_ID,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/cond/_exists",
25
collectionNumber,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3",
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authorPlantName,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/1",
27
plantNameWithAuthority,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/2",
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plantname,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/3",
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TAXONOBSERVATION_ID,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
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collectionNumber,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
31
TAXONOBSERVATION_ID,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/sourceaccessioncode/_first/1,
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taxonLevel,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",
33
denorm_species,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet","unlike VegBank, this is in fact the epithet, not the full name"
34
denorm_genus,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet/_alt/1",must be _alt-ed with genus because this is missing in 1 row that has genus
35
genus,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet/_alt/2","unlike VegBank, does *not* include genus author"
36
denorm_family,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
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Order,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=order]/taxonepithet",
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Class,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=class]/taxonepithet",
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denorm_kingdom,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet",
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denorm_triName,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet,
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taxonLevel,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/rank,
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taxonLevel,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonepithet/_if[@name=""if taxonomic name is epithet""]/cond/_alt:[2=true]/1/_taxonomic_name_is_epithet/rank",
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denorm_family,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family,
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plantNameWithAuthority,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/1,
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plantname,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1,
46
denorm_genus,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2/_filter_genus/value/_alt/1,must be _alt-ed with genus because this is missing in 1 row that has genus
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genus,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2/_filter_genus/value/_alt/2,"unlike VegBank, does *not* include genus author"
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denorm_species,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,"unlike VegBank, this is in fact the epithet, not the full name"
49
denorm_triName,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
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taxonLevel,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
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denorm_triName,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2,
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denorm_family,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/family,
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denorm_genus,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/genus/_alt/1,must be _alt-ed with genus because this is missing in 1 row that has genus
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genus,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/genus/_alt/2,"unlike VegBank, does *not* include genus author"
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denorm_species,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/specific_epithet,"unlike VegBank, this is in fact the epithet, not the full name"
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plantname,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/taxonname,
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plantNameWithAuthority,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/taxonomicname,
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taxonLevel,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/*_id/taxonverbatim/verbatimrank,
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TAXONOBSERVATION_ID,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/_if[@name=""if has taxondetermination""]/cond/_exists",
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interpretationDate,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/determinationdate/_alt/1/_dateRangeStart/value,
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interpretationType,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/determinationtype,
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currentInterpretation,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/iscurrent__verbatim,
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originalInterpretation,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/isoriginal,
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taxonFit,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[!isoriginal=true]/taxonfit,
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authorPlantName,/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonname,
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museumAccessionNumber,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
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collectionNumber,"/location/locationevent/locationevent:[@fkey=parent_id]/taxonoccurrence/voucher/*_id/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then",
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Division,,** No join mapping for *division/_alt/2 ** 
69
Kingdom,,** No non-empty join mapping for DUPLICATE#of:denorm_kingdom#Kingdom ** 
70
PLANTCONCEPT_ID,,** No join mapping for *PLANTCONCEPT_ID ** 
71
PLANTNAME_ID,,** No join mapping for *PLANTNAME_ID ** 
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ROLE_ID,,** No join mapping for *ROLE_ID ** 
73
Subclass,,** No join mapping for *Subclass ** 
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Subkingdom,,** No join mapping for *Subkingdom ** 
75
TAXONINTERPRETATION_ID,,** No join mapping for *TAXONINTERPRETATION_ID ** 
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USDAPlantsCode,,** No join mapping for *USDAPlantsCode ** 
77
VascularPlant,,** No join mapping for *VascularPlant ** 
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accessionCode,,** No join mapping for *accessionCode ** 
79
collector_ID,,** No non-empty join mapping for UNUSED#collector_ID ** 
80
commonName,,** No join mapping for vernacularName ** 
81
composite family,,** No join mapping for *composite family ** 
82
composite genus,,** No join mapping for *composite genus ** 
83
composite species,,** No join mapping for *composite species ** 
84
composite variety,,** No non-empty join mapping for EQUIV#to:species#composite variety ** full taxonomic name at that rank
85
currentTaxonInterpPlantConcept_ID,,** No join mapping for *currentTaxonInterpPlantConcept_ID ** 
86
cust_cvs_collectionFlag,,** No join mapping for *cust_cvs_collectionFlag ** 
87
cust_cvs_corner1Presence,,** No join mapping for *cust_cvs_corner1Presence ** 
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cust_cvs_corner2Presence,,** No join mapping for *cust_cvs_corner2Presence ** 
89
cust_cvs_corner3Presence,,** No join mapping for *cust_cvs_corner3Presence ** 
90
cust_cvs_corner4Presence,,** No join mapping for *cust_cvs_corner4Presence ** 
91
cust_cvs_corner5Presence,,** No join mapping for *cust_cvs_corner5Presence ** 
92
dba_src_ID,,** No join mapping for *dba_src_ID ** 
93
dba_unsure,,** No join mapping for *dba_unsure ** 
94
denorm_category,,** No join mapping for *category ** 
95
denorm_division,,"** No join mapping for *division/_alt/1 ** must be _alt-ed with Division because this is missing in 2 rows that have Division, and different from Division in 1 row"
96
denorm_hybridX,,** No join mapping for *hybridX ** 
97
denorm_quadAbbr,,** No join mapping for infraspecificRank2 ** sometimes misparsed as the last + sign in the plantNameWithAuthority
98
denorm_quadName,,** No join mapping for infraspecificEpithet2 ** sometimes misparsed as the part after the last + sign in the plantNameWithAuthority
99
denorm_triAbbr,,** No join mapping for infraspecificRank ** 
100
entry_herbLineID,,** No join mapping for *entry_herbLineID ** 
101
entry_sortOrder,,** No join mapping for *entry_sortOrder ** 
102
entry_treeLineID,,** No join mapping for *entry_treeLineID ** 
103
entry_unknownSp,,** No join mapping for *entry_unknownSp ** 
104
exotic,,** No join mapping for *exotic ** 
105
family,,** No non-empty join mapping for DUPLICATE#of:denorm_family#family ** 
106
groupType,,** No join mapping for *groupType ** 
107
growthForm_short,,** No join mapping for *growthForm_short ** 
108
lowestChildRank,,** No join mapping for *lowestChildRank ** 
109
lowestParentConcept_ID,,** No join mapping for *lowestParentConcept_ID ** 
110
lowestParentName,,** No join mapping for *lowestParentName ** 
111
museum_ID,,** No join mapping for *museum_ID ** 
112
notesMgt,,** No join mapping for *notesMgt ** 
113
notesPublic,,** No join mapping for *notesPublic ** 
114
partyType,,** No join mapping for *partyType ** 
115
plantCode,,** No join mapping for *plantCode ** 
116
plantConcept_accessionCode,,** No join mapping for *plantConcept_accessionCode ** 
117
plantConcept_dba_src_ID,,** No join mapping for *plantConcept_dba_src_ID ** 
118
plantConcept_entry_sppID,,** No join mapping for *plantConcept_entry_sppID ** 
119
plantConcept_reference_ID,,** No join mapping for *plantConcept_reference_ID ** 
120
plantDescription,,** No join mapping for *plantDescription ** 
121
reference_ID,,** No join mapping for *reference_ID ** 
122
revisions,,** No join mapping for *revisions ** 
123
section,,** No join mapping for *section ** 
124
species,,** No join mapping for speciesBinomial ** full taxonomic name at that rank
125
subgenus,,** No join mapping for subgenus ** 
126
subspecies,,** No non-empty join mapping for EQUIV#to:species#subspecies ** full taxonomic name at that rank
127
taxonConfidence,,** No join mapping for identificationVerificationStatus ** 
128
taxonInferenceArea,,** No join mapping for *taxonInferenceArea ** 
129
taxonInterpretation_PARTY_ID,,** No join mapping for *taxonInterpretation_PARTY_ID ** 
130
taxonInterpretation_PLANTNAME_ID,,** No join mapping for *taxonInterpretation_PLANTNAME_ID ** 
131
taxonInterpretation_accessionCode,,** No join mapping for *taxonInterpretation_accessionCode ** 
132
taxonInterpretation_dba_src_ID,,** No join mapping for *taxonInterpretation_dba_src_ID ** 
133
taxonObservationNotes,,** No join mapping for *taxonObservationNotes ** 
134
taxonObservation_accessionCode,,** No join mapping for *taxonObservation_accessionCode ** 
135
taxonObservation_dba_src_ID,,** No join mapping for *taxonObservation_dba_src_ID ** 
136
taxonObservation_entry_sppID,,** No join mapping for *taxonObservation_entry_sppID ** 
137
taxonObservation_reference_ID,,** No join mapping for *taxonObservation_reference_ID ** 
138
taxonRank,,** No non-empty join mapping for OMIT#taxonRank ** Omitted because taxonLevel contains this information in text form
139
temp_taxonUpToDate,,** No join mapping for *temp_taxonUpToDate ** 
140
tribe,,** No join mapping for *tribe ** 
141
usda_code,,** No join mapping for *usda_code ** 
142
usda_growthForm,,** No join mapping for *usda_growthForm ** 
143
variety,,** No non-empty join mapping for EQUIV#to:species#variety ** full taxonomic name at that rank
144
woody,,** No join mapping for *woody ** 
(2-2/9)