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Revision 11972

web/links/index.htm: updated to Firefox bookmarks. added instructions for running `svn switch` after moving everything into /trunk/ (for us, use `svn switch --force https://code.nceas.ucsb.edu/code/projects/bien/trunk # runtime: <1 min`).

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index.htm
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        <DT><A HREF="http://vegbiendev.nceas.ucsb.edu/phpmyadmin/" name="__http://vegbiendev.nceas.ucsb.edu/phpmyadmin/" ADD_DATE="1361027615" ICON_URI="http://vegbiendev.nceas.ucsb.edu/phpmyadmin/favicon.ico"><img width="16" height="16" src="http://vegbiendev.nceas.ucsb.edu/phpmyadmin/favicon.ico" style="margin-right: 0.5em;"/>&quot;</A><a name="__&quot;" href="#__&quot;" style="margin-left: 0.5em;">&para;</a>
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        <DT><A HREF="http://nimoy.nceas.ucsb.edu/phpmyadmin/" name="__http://nimoy.nceas.ucsb.edu/phpmyadmin/" ADD_DATE="1318544417" ICON_URI="http://nimoy.nceas.ucsb.edu/phpmyadmin/favicon.ico"><img width="16" height="16" src="http://nimoy.nceas.ucsb.edu/phpmyadmin/favicon.ico" style="margin-right: 0.5em;"/>nimoy</A><a name="__nimoy" href="#__nimoy" style="margin-left: 0.5em;">&para;</a>
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        <DT><A HREF="http://starscream.nceas.ucsb.edu/~aaronmk/phppgadmin/redirect.php?subject=schema&server=%3A5432%3Aallow&database=vegbien&schema=public&" name="__http://starscream.nceas.ucsb.edu/~aaronmk/phppgadmin/redirect.php?subject=schema&server=%3A5432%3Aallow&database=vegbien&schema=public&" ADD_DATE="1362008964" ICON_URI="http://starscream.nceas.ucsb.edu/~aaronmk/phppgadmin/images/themes/default/Introduction.png"><img width="16" height="16" src="http://starscream.nceas.ucsb.edu/~aaronmk/phppgadmin/images/themes/default/Introduction.png" style="margin-right: 0.5em;"/>starscream</A><a name="__starscream" href="#__starscream" style="margin-left: 0.5em;">&para;</a>
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        <DT><A HREF="http://bien.nceas.ucsb.edu/bien/bien-database-summary-statistics/" name="__http://bien.nceas.ucsb.edu/bien/bien-database-summary-statistics/" ADD_DATE="1355788711" ICON_URI="http://bien.nceas.ucsb.edu/bien/wp-content/ata-images/bien_favicon.ico"><img width="16" height="16" src="http://bien.nceas.ucsb.edu/bien/wp-content/ata-images/bien_favicon.ico" style="margin-right: 0.5em;"/>BIEN</A><a name="__BIEN" href="#__BIEN" style="margin-left: 0.5em;">&para;</a>
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        <DT><A HREF="http://bien.nceas.ucsb.edu/bien/" name="__http://bien.nceas.ucsb.edu/bien/" ADD_DATE="1317673928" ICON_URI="http://bien.nceas.ucsb.edu/bien/wp-content/ata-images/bien_favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://bien.nceas.ucsb.edu/bien/wp-content/ata-images/bien_favicon.ico" style="margin-right: 0.5em;"/>BIEN</A><a name="__BIEN" href="#__BIEN" style="margin-left: 0.5em;">&para;</a>
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        <DT><A HREF="http://rs.tdwg.org/dwc/terms/" name="__http://rs.tdwg.org/dwc/terms/" ADD_DATE="1344350345"><img width="16" height="16" src="blank.gif" style="margin-right: 0.5em;"/>DwC</A><a name="__DwC" href="#__DwC" style="margin-left: 0.5em;">&para;</a>
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        <DT><A HREF="http://vegbank.org/vegbank/views/dba_tabledescription_index.jsp?view=index&entity=dba_tabledescription" name="__http://vegbank.org/vegbank/views/dba_tabledescription_index.jsp?view=index&entity=dba_tabledescription" ADD_DATE="1345855547" ICON_URI="http://vegbank.org/vegbank/images/vegbank_logo16x16.gif" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://vegbank.org/vegbank/images/vegbank_logo16x16.gif" style="margin-right: 0.5em;"/>VegBank</A><a name="__VegBank" href="#__VegBank" style="margin-left: 0.5em;">&para;</a>
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        <DT><A HREF="http://tnrs.iplantcollaborative.org/TNRSapp.html" name="__http://tnrs.iplantcollaborative.org/TNRSapp.html" ADD_DATE="1350962070" LAST_CHARSET="UTF-8"><img width="16" height="16" src="blank.gif" style="margin-right: 0.5em;"/>TNRS</A><a name="__TNRS" href="#__TNRS" style="margin-left: 0.5em;">&para;</a>
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            <DT><A HREF="http://vegpath.org/links/" name="http://vegpath.org/links/" ADD_DATE="1389762684" ICON_URI="http://vegpath.org/favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://vegpath.org/favicon.ico" style="margin-right: 0.5em;"/>BIEN links</A><a name="BIEN links" href="#BIEN links" style="margin-left: 0.5em;">&para;</a>
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            <DT><A HREF="http://www.iplantcollaborative.org/node/1044" name="http://www.iplantcollaborative.org/node/1044" ADD_DATE="1317675381" ICON_URI="http://www.iplantcollaborative.org/sites/all/themes/iplant/favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://www.iplantcollaborative.org/sites/all/themes/iplant/favicon.ico" style="margin-right: 0.5em;"/>BIEN Project | iPlant Collaborative Web Portal</A><a name="BIEN Project | iPlant Collaborative Web Portal" href="#BIEN Project | iPlant Collaborative Web Portal" style="margin-left: 0.5em;">&para;</a>
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            <DT><A HREF="http://chac.iplantcollaborative.org/documents/bien.pdf" name="http://chac.iplantcollaborative.org/documents/bien.pdf" ADD_DATE="1317674748"><img width="16" height="16" src="blank.gif" style="margin-right: 0.5em;"/>bien.pdf</A><a name="bien.pdf" href="#bien.pdf" style="margin-left: 0.5em;">&para;</a>
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            <DT><A HREF="http://bien.nceas.ucsb.edu/bien/" name="http://bien.nceas.ucsb.edu/bien/" ADD_DATE="1317673928" LAST_CHARSET="UTF-8"><img width="16" height="16" src="blank.gif" style="margin-right: 0.5em;"/>Botanical Information and Ecology Network</A><a name="Botanical Information and Ecology Network" href="#Botanical Information and Ecology Network" style="margin-left: 0.5em;">&para;</a>
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            <DT><A HREF="http://bien.nceas.ucsb.edu/bien/" name="http://bien.nceas.ucsb.edu/bien/" ADD_DATE="1317673928" ICON_URI="http://bien.nceas.ucsb.edu/bien/wp-content/ata-images/bien_favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://bien.nceas.ucsb.edu/bien/wp-content/ata-images/bien_favicon.ico" style="margin-right: 0.5em;"/>Botanical Information and Ecology Network</A><a name="Botanical Information and Ecology Network" href="#Botanical Information and Ecology Network" style="margin-left: 0.5em;">&para;</a>
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            <DT><A HREF="http://groups.nceas.ucsb.edu/bien" name="http://groups.nceas.ucsb.edu/bien" ADD_DATE="1317767384" ICON_URI="http://groups.nceas.ucsb.edu/bien/favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://groups.nceas.ucsb.edu/bien/favicon.ico" style="margin-right: 0.5em;"/>Botanical Information and Ecology Network</A><a name="Botanical Information and Ecology Network" href="#Botanical Information and Ecology Network" style="margin-left: 0.5em;">&para;</a>
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<DD>page's description: NCEAS Project 12290: Developing an integrated botanical information network to investigate the ecological impacts of global climate change on plant biodiversity 
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            <DT><A HREF="http://www.iplantcollaborative.org/" name="http://www.iplantcollaborative.org/" ADD_DATE="1323983414" ICON_URI="http://www.iplantcollaborative.org/sites/all/themes/iplant/favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://www.iplantcollaborative.org/sites/all/themes/iplant/favicon.ico" style="margin-right: 0.5em;"/>iPlant Collaborative Web Portal | The iPlant Collaborative: Empowering a New Plant Biology</A><a name="iPlant Collaborative Web Portal | The iPlant Collaborative: Empowering a New Plant Biology" href="#iPlant Collaborative Web Portal | The iPlant Collaborative: Empowering a New Plant Biology" style="margin-left: 0.5em;">&para;</a>
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                        <DT><A HREF="http://ubuntuforums.org/showthread.php?t=2058377" name="http://ubuntuforums.org/showthread.php?t=2058377" ADD_DATE="1373365205" ICON_URI="http://ubuntuforums.org/favicon.ico" LAST_CHARSET="windows-1252"><img width="16" height="16" src="http://ubuntuforums.org/favicon.ico" style="margin-right: 0.5em;"/>[ubuntu] remove old linux kernels</A><a name="[ubuntu] remove old linux kernels" href="#[ubuntu] remove old linux kernels" style="margin-left: 0.5em;">&para;</a>
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<DD>page's description: How does one remove the extra entries of the old linux kernels after upgrade of a new version. Remember Synaptic used to do that but it was the case when Startup manager used to do a good job. Please help if i&#39;m missing something.
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this needs to be done periodically, because apt-get unfortunately does not do it automatically
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this needs to be done periodically, because apt-get unfortunately does not do it automatically:
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$ sudo apt-get autoremove
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if that doesn&#39;t work:
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&quot;
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dpkg-query -l | awk &#39;/linux-image-*/ {print $2}&#39;
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sudo apt-get --purge remove &lt;Kernel&gt;
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            <DL><p>
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                <DT><a name="svn" href="#svn"><H3 ADD_DATE="1367370827">svn</H3></a>
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                <DL><p>
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                    <DT><A HREF="http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html" name="http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html" ADD_DATE="1390247199" LAST_CHARSET="UTF-8"><img width="16" height="16" src="blank.gif" style="margin-right: 0.5em;"/>** svn switch (sw)</A><a name="** svn switch (sw)" href="#** svn switch (sw)" style="margin-left: 0.5em;">&para;</a>
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<DD>page's description: eg. after moving everything into /trunk/, do the following on all other working copies:
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$ time svn switch --force https://&lt;old-repo-root&gt;/trunk # runtime: &lt;1 min (&quot;0m28.465s&quot;)
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                    <DT><A HREF="http://subversion.apache.org/faq.html#case-change" name="http://subversion.apache.org/faq.html#case-change" ADD_DATE="1363418099" ICON_URI="http://subversion.apache.org/favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://subversion.apache.org/favicon.ico" style="margin-right: 0.5em;"/>Apache Subversion FAQ</A><a name="Apache Subversion FAQ" href="#Apache Subversion FAQ" style="margin-left: 0.5em;">&para;</a>
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                    <DT><A HREF="http://lexfridman.com/blogs/research/2011/02/21/executable-files-in-svn/" name="http://lexfridman.com/blogs/research/2011/02/21/executable-files-in-svn/" ADD_DATE="1332193949" LAST_CHARSET="UTF-8"><img width="16" height="16" src="blank.gif" style="margin-right: 0.5em;"/>Executable Files in SVN</A><a name="Executable Files in SVN" href="#Executable Files in SVN" style="margin-left: 0.5em;">&para;</a>
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                    <DT><A HREF="http://www.4pmp.com/2010/02/svn-entry-has-unexpectedly-changed-special-status/" name="http://www.4pmp.com/2010/02/svn-entry-has-unexpectedly-changed-special-status/" ADD_DATE="1373151357" LAST_CHARSET="UTF-8"><img width="16" height="16" src="blank.gif" style="margin-right: 0.5em;"/>High Fibre Programming » SVN: Entry has unexpectedly changed special status</A><a name="High Fibre Programming » SVN: Entry has unexpectedly changed special status" href="#High Fibre Programming » SVN: Entry has unexpectedly changed special status" style="margin-left: 0.5em;">&para;</a>
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                    <DT><A HREF="https://git.wiki.kernel.org/index.php/GitSvnCrashCourse" name="https://git.wiki.kernel.org/index.php/GitSvnCrashCourse" ADD_DATE="1389298877" ICON_URI="https://git.wiki.kernel.org/favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="https://git.wiki.kernel.org/favicon.ico" style="margin-right: 0.5em;"/>*** GitSvnCrashCourse - Git SCM Wiki</A><a name="*** GitSvnCrashCourse - Git SCM Wiki" href="#*** GitSvnCrashCourse - Git SCM Wiki" style="margin-left: 0.5em;">&para;</a>
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<DD>&quot;here&#39;s what you need to use an SVN project:
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git svn clone --stdlayout url	svn checkout url
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git svn rebase	svn update
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git commit -a &amp;&amp; git svn dcommit	svn commit
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git svn clone --stdlayout url # svn checkout url
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git svn rebase # svn update
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git commit -a &amp;&amp; git svn dcommit # svn commit
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&quot;
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                    <DT><A HREF="http://viget.com/extend/a-gaggle-of-git-tips" name="http://viget.com/extend/a-gaggle-of-git-tips" ADD_DATE="1365937554" ICON_URI="http://viget.com/favicon.ico" LAST_CHARSET="UTF-8"><img width="16" height="16" src="http://viget.com/favicon.ico" style="margin-right: 0.5em;"/>A Gaggle Of Git Tips | Viget</A><a name="A Gaggle Of Git Tips | Viget" href="#A Gaggle Of Git Tips | Viget" style="margin-left: 0.5em;">&para;</a>
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<DD>&quot;I use git rebase -i to make sure every commit is clean. For example, when I have two commits with broken code followed by a third clean commit&quot;

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