head); function add_ns($name, $path_pat, $url_func) { global $root, $h_level, $path, $ns; if (is_string($url_func)) $url_func = by_prefix($url_func); print("'.$root.''.$name."".$path_pat."\n"); if ($ns === strtolower($name)) # found match, so redirect { header("Location: ".strip_url($url_func($path->tail))); ob_end_flush(); exit; } } function custom_separator($url, $sep, $main_url=null) { if (!isset($main_url)) $main_url = $url; return function($path) use($url, $sep, $main_url) { if ($path === "") return $main_url; $path = parse_dot_path($path); return $url.join_non_empty($sep, array($path->head, $path->tail)); }; } function fragment_override($url, $fragment=null) { return function($path) use($url, $fragment) { if (!isset($fragment)) { $path = parse_dot_path($path); $fragment = $path->head; $path = $path->tail; } if ($path !== "") $url .= "?".$path; return $url."#".$fragment; }; } function phpPgAdmin($url, $table=null) { return function($path) use($url, $table) { $path = join_non_empty(".", array($table, $path)); $path = parse_dot_path($path); $subject = "schema"; if ($path->head !== "") { $url .= "&table=".$path->head; if ($path->tail !== "") { $url .= "&column=".$path->tail; $subject = "column"; } else $subject = "table"; } $url .= "&subject=".$subject; return $url; }; } function phpMyAdmin($url, $table=null) { return function($path) use($url, $table) { $path = join_non_empty(".", array($table, $path)); $path = parse_dot_path($path); $target = "db_structure"; if ($path->head !== "") { $url .= "&table=".$path->head; if ($path->tail !== "") $url .= "&column=".$path->tail; $target = "tbl_structure"; } $url .= "&target=".$target.".php"; return $url; }; } ob_start(); // delay output in case there is a redirect ?> VegPath

VegPath persistent URLs for vegetation resources

Supported URL patterns: (elements in italics are optional)

Terms

Data

\n"); print("

Exchange schemas

"); { print("

\n"); add_ns("VegCore", ".term", "https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#"); add_ns("DwC", ".term", "http://rs.tdwg.org/dwc/terms/#"); { print("
\n"); $h_level++; add_ns("DwC.history", ".term", "http://rs.tdwg.org/dwc/terms/history/#"); print("
\n"); $h_level--; } add_ns("TCS", "#/XPath", "http://www.tdwg.org/standards/117/download/#/v101.xsd"); add_ns("VegX", "#/XPath", "http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd"); print("

\n"); } print("

Aggregators

"); { print("

\n"); add_ns("VegBank", ".table.column", custom_separator("http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&entity=dba_tabledescription&where=where_tablename&wparam=", "#", "http://vegbank.org/get/index/dba_tabledescription")); add_ns("SALVIAS", ".table.column", by_prefix($SALVIAS."#Plot_", $SALVIAS)); { print("
\n"); $h_level++; add_ns("SALVIAS.db", ".table.column", nimoy_db("salvias_plots")); add_ns("SALVIAS.users", ".table.column", nimoy_db("salvias_users")); print("
\n"); $h_level--; } add_ns("BIEN2", "", $nimoy."?target=server_databases.php"); { print("
\n"); $h_level++; add_ns("BIEN2.web", ".table.column", nimoy_db("bien_web")); add_ns("BIEN2.core", ".table.column", nimoy_db("bien2")); add_ns("BIEN2.geoscrub", ".table.column", nimoy_db("geoscrub")); add_ns("BIEN2.staging", ".table.column", nimoy_db("bien2_staging")); print("
\n"); $h_level--; } add_ns("VegBIEN", ".table.column", phpPgAdmin("http://vegbiendev.nceas.ucsb.edu/phppgadmin/redirect.php?server=localhost%3A5432%3Aallow&database=vegbien&schema=public")); print("

\n"); } print("

Primary databases

"); { print("

\n"); add_ns("TNRS", ".term", fragment_override("http://tnrs.iplantcollaborative.org/instructions.html", "download_results")); add_ns("CTFS", "", $Redmine."/wiki/CTFS"); { print("
\n"); $h_level++; add_ns("CTFS.schema", ".table.column", $Redmine_svn."/inputs/CTFS/_archive/DBv5.txt#"); add_ns("CTFS.tables", ".table", fragment_override($Redmine."/wiki/CTFS", "Tables")); add_ns("CTFS.terms", ".term", $Redmine_svn."/inputs/CTFS/_src/ctfs-comments_worksheet.xls#"); print("
\n"); $h_level--; } add_ns("IH.db", ".term", $IH_db); print("

\n"); } print("

People

"); { print("

\n"); add_ns("Brad", "", "mailto:bboyleATemail.arizona.edu"); { print("
\n"); $h_level++; $Brad_Boyle_VegCore = $Redmine_svn."/schemas/VegCore/Brad_Boyle"; add_ns("Brad.data-provenance", ".term", $Brad_Boyle_VegCore."/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#"); add_ns("Brad.DwC-IDs.2013-2-7", ".term", $Brad_Boyle_VegCore."/vegbien_identifiers.xlsx#"); add_ns("Brad.DwC-IDs.2013-1-31", ".term", $Brad_Boyle_VegCore."/vegbien_identifier_examples.xlsx#"); print("
\n"); $h_level--; } print("

\n"); } print("\n"); ?>

\n"); print("

Institutions

"); { print("

\n"); add_ns("IH", ".herbarium_code", by_prefix("http://sweetgum.nybg.org/ih/herbarium_list.php?QueryName=DetailedQuery&Restriction=NamPartyType+%3D+%27IH+Herbarium%27&col_NamOrganisationAcronym=", "http://sweetgum.nybg.org/ih/")); print("

\n"); } print("\n"); ?>