Project

General

Profile

1
#!/bin/bash -e
2
# Imports all inputs at once
3
set -o errexit -o pipefail # errexit since may be called from shell
4

    
5
if test "$1" = .; then set --; fi # was .-included without args, so $@ is wrong
6

    
7
hidden_srcs()
8
{
9
    local hidden_srcs=1 inputs=() # with_all adds the hidden srcs to @inputs
10
    . "$selfDir/with_all" import by_col=1 "$@"
11
}
12

    
13
delete_logs() { find . -name "${n:+n=$n.}$version.log.sql" -delete; }
14

    
15
main()
16
{
17
    local self="${BASH_SOURCE[0]}"
18
    local selfDir="$(dirname -- "$self")"
19
    pushd "$selfDir/.."
20
    
21
    if ! test "$SHLVL" -ge 2; then # was run without subshell
22
        # needs subshell so errexits don't close the terminal window
23
        echo 'usage: must be run in a subshell, obtained by running `$0`' >&2
24
        return 0 # not nonzero because this will close the terminal window
25
    fi
26
    if test "${BASH_LINENO[1]}" = 0; then # was run without initial "."
27
        echo "usage: (*in subshell*) [version=...] [inputs=(inputs/src/ ...)]; \
28
. $self [vars...] (note initial \".\")"|fold -s >&2
29
        return 0 # not nonzero because this will close the subshell
30
    fi
31
    : ${version=$(make -s version)}
32
    local by_col=${by_col-1} full_import=1
33
    export version by_col full_import
34
    
35
    if test ! "${log-1}"; then trap delete_logs EXIT SIGINT SIGTERM; fi #log==''
36
    
37
    local log=1 # always use log files for background processes
38
    
39
    # remove any leftover TNRS lockfile. usually, the PID in it would not exist,
40
    # but sometimes it now refers to an active process which blocks tnrs.make.
41
    "rm" -f inputs/.TNRS/tnrs/tnrs.make.lock
42
    
43
    make schemas/$version/reinstall
44
    
45
    set +o errexit # don't errexit if a background process is Ctrl-C'd
46
    
47
    local hidden_srcs=1; . "$selfDir/with_all" Source/import "$@"
48
        # note that this isn't affected by $import_source
49
    wait # wait for asynchronous commands
50
    unset hidden_srcs
51
    
52
    local import_source= # Source tables have already been imported
53
    export import_source # must come after local
54
    
55
    hidden_srcs "$@" # separate function to avoid overwriting @inputs
56
    wait # wait for asynchronous commands
57
    
58
    . "$selfDir/with_all" import_scrub "$@" # uses $by_col
59
    
60
    local jobs="$(jobs -p)"
61
    echo "import_scrub PIDs: $jobs" >&2
62
    
63
    bin/after_import $jobs &
64
    echo "after_import PID: $!" >&2
65
    
66
    . bin/disown_all
67
    
68
    popd
69
}
70
main "$@"
(31-31/86)