Revision 14784
Added by Aaron Marcuse-Kubitza over 9 years ago
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<p style="padding-left:4em;">See <strong><a href="/nceas/attachments/download/493/ACAD.Specimen.csv" class="attachment">ACAD.Specimen.csv</a><sup><a href="#fn1">1</a></sup></strong>, which contains well-formed Darwin Core data.</p> |
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<p style="padding-left:5em;" id="fn1" class="footnote"><sup>1</sup> This <a href="http://www.canadensys.net/2012/why-we-should-publish-our-data-under-cc0" class="external">public domain</a> dataset is from <a href="http://data.canadensys.net/ipt/resource.do?r=acad-specimens" class="external">ACAD</a>, a <a href="http://data.canadensys.net/ipt/" class="external">Canadensys herbarium</a></p> |
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<p style="padding-left:5em;" id="fn1" class="footnote"><sup>1</sup> This <a href="http://www.canadensys.net/2012/why-we-should-publish-our-data-under-cc0" class="external">public domain</a> dataset is from <a href="http://data.canadensys.net/ipt/resource.do?r=acad-specimens" class="external">ACAD</a>, a <a href="http://data.canadensys.net/ipt/" class="external">Canadensys herbarium</a><br /> </p>
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<a name="Tables"></a>
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<h1 >Tables<a href="#Tables" class="wiki-anchor">¶</a></h1>
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<a name="normalized-VegCore-schema"></a>
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<h1 ><a href="http://VegCore.vegpath.org/ERD/" class="external">normalized VegCore schema</a><a href="#normalized-VegCore-schema" class="wiki-anchor">¶</a></h1>
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<p>The schema makes extensive use of inheritance, which can be implemented in <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">several ways</a>. The tables are shown in the ERD using <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">class table inheritance</a> (option 3 in the link), which is considered the best practice for most database engines. However, <em>if and only if</em> <a href="http://www.postgresql.org/docs/9.1/static/ddl-inherit.html" class="external">PostgreSQL-style inheritance</a> someday supports foreign keys<sup><a href="#fn3">3</a></sup>, it's actually better to use <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">concrete table inheritance</a> (option 2), which avoids both the need to insert into each superclass table separately, and the need to join to superclass tables when selecting<sup><a href="#fn2">2</a></sup>. Until this is available, you can also get these benefits via <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">single table inheritance</a> (option 1, which is the denormalized, full_occurrence format) at the expense of being messier (not having separate tables for the separate subclasses).</p>
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<p>The schema makes extensive use of inheritance, which can be implemented in <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">several ways</a>. The tables are shown in the ERD using <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">class table inheritance</a> (option 3 in the link), which is considered the best practice for most database engines. However, <em>if and only if</em> <a href="http://www.postgresql.org/docs/9.1/static/ddl-inherit.html" class="external">PostgreSQL-style inheritance</a> ever supports foreign keys<sup><a href="#fn3">3</a></sup>, it may then be better to use <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">concrete table inheritance</a> (option 2), which avoids both the need to insert into each superclass table separately, and the need to join to superclass tables when selecting<sup><a href="#fn2">2</a></sup>. Until this is available, you can also get these benefits via <a href="http://stackoverflow.com/questions/3579079/how-can-you-represent-inheritance-in-a-database#3579462" class="external">single table inheritance</a> (option 1, which is the denormalized, full_occurrence format) at the expense of being messier (not having separate tables for the separate subclasses).</p>
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<p id="fn2" class="footnote"><sup>2</sup> at the cost of slightly slower index scans when there is a large number of subclasses and rows are evenly distributed between them (because each subclass index needs to be scanned separately).<br />also, when inserting into a subclass, you need to explicitly check that the pkey doesn't exist in any superclass (or sibling subclass), because unique indexes don't include superclass rows.</p> |
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<p><a href="http://VegCore.vegpath.org/ERD/"><img src="http://vegpath.org/VegCore/ERD/VegCore.ERD.png" title="VegCore schema: click for hyperlinked version" alt="VegCore schema: click for hyperlinked version" /></a></p> |
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<a name="denormalized-VegCore-entities"></a> |
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<h1 >denormalized VegCore entities<a href="#denormalized-VegCore-entities" class="wiki-anchor">¶</a></h1> |
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<p><a href="#Source" class="wiki-page">Source</a><br /><a href="#Dataset" class="wiki-page">Dataset</a><br /><a href="#Record" class="wiki-page">Record</a><br /><a href="#Occurrence" class="wiki-page">Occurrence</a><br /><a href="#Method" class="wiki-page">Method</a><br /><a href="#Stratum" class="wiki-page">Stratum</a><br /><a href="#Project" class="wiki-page">Project</a><br /><a href="#Event" class="wiki-page">Event</a><br /><a href="#EventParticipant" class="wiki-page">EventParticipant</a><br /><a href="#Coordinates" class="wiki-page">Coordinates</a><br /><a href="#Placename" class="wiki-page">Placename</a><br /><a href="#Geovalidation" class="wiki-page">Geovalidation</a><br /><a href="#Location" class="wiki-page">Location</a><br /><a href="#LocationObservation" class="wiki-page">LocationObservation</a><br /><a href="#Subplot" class="wiki-page">Subplot</a><br /><a href="#SubplotObservation" class="wiki-page">SubplotObservation</a><br /><a href="#SoilObservation" class="wiki-page">SoilObservation</a><br /><a href="#GeologicalContext" class="wiki-page">GeologicalContext</a><br /><a href="#Community" class="wiki-page">Community</a><br /><a href="#TaxonName" class="wiki-page">TaxonName</a><br /><a href="#TaxonConcept" class="wiki-page">TaxonConcept</a><br /><a href="#QualifiedTaxonName" class="wiki-page">QualifiedTaxonName</a><br /><a href="#MatchedTaxon" class="wiki-page">MatchedTaxon</a><br /><a href="#AcceptedTaxon" class="wiki-page">AcceptedTaxon</a><br /><a href="#TaxonOccurrence" class="wiki-page">TaxonOccurrence</a><br /><a href="#TaxonDetermination" class="wiki-page">TaxonDetermination</a><br /><a href="#OriginalTaxonDetermination" class="wiki-page">OriginalTaxonDetermination</a><br /><a href="#AggregateObservation" class="wiki-page">AggregateObservation</a><br /><a href="#Individual" class="wiki-page">Individual</a><br /><a href="#IndividualObservation" class="wiki-page">IndividualObservation</a><br /><a href="#Stem" class="wiki-page">Stem</a><br /><a href="#StemObservation" class="wiki-page">StemObservation</a><br /><a href="#Collection" class="wiki-page">Collection</a><br /><a href="#Specimen" class="wiki-page">Specimen</a><br /><a href="#Voucher" class="wiki-page">Voucher</a><br /><a href="#Measurement" class="wiki-page">Measurement</a><br /><a href="#ResourceRelationship" class="wiki-page">ResourceRelationship</a></p> |
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<a name="source"></a> |
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<h2 style="padding-left:2em;"><a href="#source" class="wiki-page">source</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien_web&table=observation&target=tbl_structure.php#dataSourceName"><img src="_" style="font-size: small;" title="BIEN2" alt="BIEN2" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/datasource"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#source" class="wiki-anchor">¶</a></h2>
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<h2 style="padding-left:2em;"><a href="#source" class="wiki-page">source</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien_web&table=observation&target=tbl_structure.php#dataSourceName"><img src="_" style="font-size: small;" title="BIEN2" alt="BIEN2" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/datasource"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#source" class="wiki-anchor">¶</a></h2>
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<p style="padding-left:5em;">Where <em>this</em> database got the data</p> |
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<a name="firstPublisher"></a> |
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<h2 style="padding-left:2em;"><a href="#firstPublisher" class="wiki-page">firstPublisher</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#primarydataprovider/datapublisher"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#firstPublisher" class="wiki-anchor">¶</a></h2>
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<h2 style="padding-left:2em;"><a href="#firstPublisher" class="wiki-page">firstPublisher</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#primarydataprovider/datapublisher"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#firstPublisher" class="wiki-anchor">¶</a></h2>
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<p style="padding-left:5em;">Who initially published the data. This is usually an institution.</p> |
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<a name="data_authors"></a> |
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<h2 style="padding-left:2em;"><a href="#data_authors" class="wiki-page">data_authors</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#dataauthor"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#data_authors" class="wiki-anchor">¶</a></h2>
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<h2 style="padding-left:2em;"><a href="#data_authors" class="wiki-page">data_authors</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#dataauthor"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#data_authors" class="wiki-anchor">¶</a></h2>
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<p style="padding-left:5em;">Who made the observation the data record is based on. This is usually a person. For a <a href="#Specimen" class="wiki-page">specimen</a> or <a href="#Measurement" class="wiki-page">measurement</a>, this is the <a href="#collector" class="wiki-page">collector</a>.</p> |
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<a name="dataOwners"></a> |
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<h2 style="padding-left:2em;"><a href="#dataOwners" class="wiki-page">dataOwners</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/datasetOwnerID"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#dataOwners" class="wiki-anchor">¶</a></h2>
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<h2 style="padding-left:2em;"><a href="#dataOwners" class="wiki-page">dataOwners</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/datasetOwnerID"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#dataOwners" class="wiki-anchor">¶</a></h2>
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<p style="padding-left:5em;">"A dataauthor who retains at least minimum ownership rights. A test of minimum ownership rights is acknowledgement: if you are obliged to cite a dataauthor, they they are also a dataowner. Collectors of individuals specimens are not considered data owners as they are not typically acknowledged. Dataowner may have more extensive ownership rights, including the right to restrict access to their data and the right to be offer coauthorship in publications which use their data." (<a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#dataowner" class="external">Brad Boyle</a>)</p> |
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<a name="dataset"></a> |
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<h2 style="padding-left:2em;"><a href="#dataset" class="wiki-page">dataset</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#datasetName"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#dataset"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#dataset" class="wiki-anchor">¶</a></h2>
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<h2 style="padding-left:2em;"><a href="#dataset" class="wiki-page">dataset</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#datasetName"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#dataset"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#dataset" class="wiki-anchor">¶</a></h2>
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<p style="padding-left:5em;">"One or more data records managed together as a unit, and limited in scope in one or more ways, for example, to a particular region ("Madidi National Park forest plots"), a particular author ("Alwyn Gentry Transect Dataset"), a particular taxon ("University of Arizona Mycological Collection"), a particular research project ("La Selva secondary forest plots") or a particular data publisher (typically, a herbarium, such as New York Botanical Garden)" (<a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/629/BIEN%20database%20entities%20related%20to%20data%20provenance%20and%20ownership.docx#dataset" class="external">Brad Boyle</a>)</p>
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<a name="datasetURL"></a> |
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<h2 style="padding-left:2em;"><a href="#datasetURL" class="wiki-page">datasetURL</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#datasetID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/datasetID"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#datasetURL" class="wiki-anchor">¶</a></h2>
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<h2 style="padding-left:2em;"><a href="#datasetURL" class="wiki-page">datasetURL</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#datasetID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/datasetID"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#datasetURL" class="wiki-anchor">¶</a></h2>
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<a name="datasetID"></a> |
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<a name="recordID"></a> |
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<h2 style="padding-left:2em;"><a href="#recordID" class="wiki-page">recordID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="analogous to" alt="analogous to" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#occurrenceID"><img src="_" style="font-size: small;" title="occurrenceID" alt="occurrenceID" /></a><a href="#recordID" class="wiki-anchor">¶</a></h2>
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<h2 style="padding-left:2em;"><a href="#recordID" class="wiki-page">recordID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="analogous to" alt="analogous to" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#occurrenceID"><img src="_" style="font-size: small;" title="occurrenceID" alt="occurrenceID" /></a><a href="#recordID" class="wiki-anchor">¶</a></h2>
|
|
| 378 | 385 |
|
| 379 | 386 |
|
| 380 | 387 |
<a name="dataProviderRecordID"></a> |
| ... | ... | |
| 500 | 507 |
|
| 501 | 508 |
|
| 502 | 509 |
<a name="occurrenceID"></a> |
| 503 |
<h2 style="padding-left:2em;"><a href="#occurrenceID" class="wiki-page">occurrenceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#occurrenceID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#occurrenceID" class="wiki-anchor">¶</a></h2>
|
|
| 510 |
<h2 style="padding-left:2em;"><a href="#occurrenceID" class="wiki-page">occurrenceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#occurrenceID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#occurrenceID" class="wiki-anchor">¶</a></h2>
|
|
| 504 | 511 |
|
| 505 | 512 |
|
| 506 | 513 |
<p style="padding-left:5em;">"A globally unique identifier for the specimen or observation, formed by combining the [...] unique identifier of the collection with the locally unique identifier of the specimen. For specimens, construct as follows: "urn:catalog:[institutionCode]:[collectionCode]:[catalogNumber]". If a properly formed occurrenceID is provided by the data provider, use it. For plots, construct as follows: "urn:observation:[datasource]:[dataset]:[catalogNumber]. Replace any spaces in dataset name with hyphens." (<a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/occurrenceID" class="external">Brad Boyle</a>)</p> |
| ... | ... | |
| 648 | 655 |
|
| 649 | 656 |
|
| 650 | 657 |
<a name="samplingProtocolID"></a> |
| 651 |
<h2 style="padding-left:2em;"><a href="#samplingProtocolID" class="wiki-page">samplingProtocolID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#samplingProtocolID" class="wiki-anchor">¶</a></h2>
|
|
| 658 |
<h2 style="padding-left:2em;"><a href="#samplingProtocolID" class="wiki-page">samplingProtocolID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#samplingProtocolID" class="wiki-anchor">¶</a></h2>
|
|
| 652 | 659 |
|
| 653 | 660 |
|
| 654 | 661 |
<a name="samplingProtocol"></a> |
| ... | ... | |
| 727 | 734 |
|
| 728 | 735 |
|
| 729 | 736 |
<a name="projectID"></a> |
| 730 |
<h2 style="padding-left:2em;"><a href="#projectID" class="wiki-page">projectID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plotObservations/plotObservation/projectID"><img src="_" style="font-size: small;" title="VegX" alt="VegX" /></a><a href="#projectID" class="wiki-anchor">¶</a></h2>
|
|
| 737 |
<h2 style="padding-left:2em;"><a href="#projectID" class="wiki-page">projectID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plotObservations/plotObservation/projectID"><img src="_" style="font-size: small;" title="VegX" alt="VegX" /></a><a href="#projectID" class="wiki-anchor">¶</a></h2>
|
|
| 731 | 738 |
|
| 732 | 739 |
|
| 733 | 740 |
<p style="padding-left:5em;">"A reference to a specific 'project'" (<a href="#VegX" class="wiki-page">VegX</a>)</p> |
| ... | ... | |
| 775 | 782 |
|
| 776 | 783 |
|
| 777 | 784 |
<a name="eventID"></a> |
| 778 |
<h2 style="padding-left:2em;"><a href="#eventID" class="wiki-page">eventID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#eventID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#eventID" class="wiki-anchor">¶</a></h2>
|
|
| 785 |
<h2 style="padding-left:2em;"><a href="#eventID" class="wiki-page">eventID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#eventID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#eventID" class="wiki-anchor">¶</a></h2>
|
|
| 779 | 786 |
|
| 780 | 787 |
|
| 781 | 788 |
<a name="censusID"></a> |
| ... | ... | |
| 1132 | 1139 |
|
| 1133 | 1140 |
|
| 1134 | 1141 |
<a name="higherGeographyID"></a> |
| 1135 |
<h2 style="padding-left:2em;"><a href="#higherGeographyID" class="wiki-page">higherGeographyID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#higherGeographyID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#higherGeographyID" class="wiki-anchor">¶</a></h2>
|
|
| 1142 |
<h2 style="padding-left:2em;"><a href="#higherGeographyID" class="wiki-page">higherGeographyID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#higherGeographyID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#higherGeographyID" class="wiki-anchor">¶</a></h2>
|
|
| 1136 | 1143 |
|
| 1137 | 1144 |
|
| 1138 | 1145 |
<a name="higherGeography"></a> |
| ... | ... | |
| 1212 | 1219 |
<h2 style="padding-left:2em;"><a href="#locality" class="wiki-page">locality</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#locality"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#locality" class="wiki-anchor">¶</a></h2> |
| 1213 | 1220 |
|
| 1214 | 1221 |
|
| 1222 |
<a name="verbatimLocality"></a> |
|
| 1223 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#verbatimLocality" class="wiki-page">verbatimLocality</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#verbatimLocality"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#verbatimLocality" class="wiki-anchor">¶</a></h3> |
|
| 1224 |
|
|
| 1225 |
|
|
| 1215 | 1226 |
<a name="locationNarrative"></a> |
| 1216 | 1227 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#locationNarrative" class="wiki-page">locationNarrative</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/locationNarrative"><img src="_" style="font-size: small;" title="VegX" alt="VegX" /></a><a href="#locationNarrative" class="wiki-anchor">¶</a></h3> |
| 1217 | 1228 |
|
| ... | ... | |
| 1220 | 1231 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#descriptionOfSite" class="wiki-page">descriptionOfSite</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/CTFS#DescriptionOfSite"><img src="_" style="font-size: small;" title="CTFS" alt="CTFS" /></a><a href="#descriptionOfSite" class="wiki-anchor">¶</a></h3> |
| 1221 | 1232 |
|
| 1222 | 1233 |
|
| 1223 |
<a name="verbatimLocality"></a> |
|
| 1224 |
<h2 style="padding-left:2em;"><a href="#verbatimLocality" class="wiki-page">verbatimLocality</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#verbatimLocality"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#verbatimLocality" class="wiki-anchor">¶</a></h2> |
|
| 1225 |
|
|
| 1226 |
|
|
| 1227 | 1234 |
<a name="Geovalidation"></a> |
| 1228 | 1235 |
<h1 ><a href="#Geovalidation" class="wiki-page">Geovalidation</a><a href="#Geovalidation" class="wiki-anchor">¶</a></h1> |
| 1229 | 1236 |
|
| ... | ... | |
| 1362 | 1369 |
|
| 1363 | 1370 |
|
| 1364 | 1371 |
<a name="PlotLocation"></a> |
| 1365 |
<h3 style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#PlotLocation" class="wiki-page">PlotLocation</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="sftp://vegbiendev.nceas.ucsb.edu/home/bien/svn/inputs/Madidi/Location/Plot_Location_Export_PP_Yarimi_9.csv"><img src="_" style="font-size: small;" title="Madidi" alt="Madidi" /></a><a href="#PlotLocation" class="wiki-anchor">¶</a></h3>
|
|
| 1372 |
<h3 style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#PlotLocation" class="wiki-page">PlotLocation</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="sftp://vegbiendev.nceas.ucsb.edu/home/bien/inputs/Madidi/Location/Plot_Location_Export_PP_Yarimi_9.csv"><img src="_" style="font-size: small;" title="Madidi" alt="Madidi" /></a><a href="#PlotLocation" class="wiki-anchor">¶</a></h3> |
|
| 1366 | 1373 |
|
| 1367 | 1374 |
|
| 1368 | 1375 |
<a name="locationID"></a> |
| 1369 |
<h2 style="padding-left:2em;"><a href="#locationID" class="wiki-page">locationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#locationID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#locationID" class="wiki-anchor">¶</a></h2>
|
|
| 1376 |
<h2 style="padding-left:2em;"><a href="#locationID" class="wiki-page">locationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#locationID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#locationID" class="wiki-anchor">¶</a></h2>
|
|
| 1370 | 1377 |
|
| 1371 | 1378 |
|
| 1372 | 1379 |
<a name="plotID"></a> |
| ... | ... | |
| 1400 | 1407 |
|
| 1401 | 1408 |
|
| 1402 | 1409 |
<a name="parentLocationID"></a> |
| 1403 |
<h2 style="padding-left:2em;"><a href="#parentLocationID" class="wiki-page">parentLocationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#parentLocationID" class="wiki-anchor">¶</a></h2>
|
|
| 1410 |
<h2 style="padding-left:2em;"><a href="#parentLocationID" class="wiki-page">parentLocationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#parentLocationID" class="wiki-anchor">¶</a></h2>
|
|
| 1404 | 1411 |
|
| 1405 | 1412 |
|
| 1406 | 1413 |
<p style="padding-left:5em;">Related: <a href="#locationID" class="wiki-page">locationID</a>, <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename#PARENT_ID" class="external">VegBank:PARENT_ID</a></p> |
| ... | ... | |
| 1436 | 1443 |
|
| 1437 | 1444 |
|
| 1438 | 1445 |
<a name="PlotInventory"></a> |
| 1439 |
<h3 style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#PlotInventory" class="wiki-page">PlotInventory</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="sftp://vegbiendev.nceas.ucsb.edu/home/bien/svn/inputs/Madidi/LocationObservation/Plot_Inventory_Export_PP_Yarimi_9.csv"><img src="_" style="font-size: small;" title="Madidi" alt="Madidi" /></a><a href="#PlotInventory" class="wiki-anchor">¶</a></h3>
|
|
| 1446 |
<h3 style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#PlotInventory" class="wiki-page">PlotInventory</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="sftp://vegbiendev.nceas.ucsb.edu/home/bien/inputs/Madidi/LocationObservation/Plot_Inventory_Export_PP_Yarimi_9.csv"><img src="_" style="font-size: small;" title="Madidi" alt="Madidi" /></a><a href="#PlotInventory" class="wiki-anchor">¶</a></h3> |
|
| 1440 | 1447 |
|
| 1441 | 1448 |
|
| 1442 | 1449 |
<p style="padding-left:3em;">Related: <a href="#Location" class="wiki-page">Location</a>, <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename" class="external">VegBank:plot</a></p> |
| ... | ... | |
| 1688 | 1695 |
|
| 1689 | 1696 |
|
| 1690 | 1697 |
<a name="subplotID"></a> |
| 1691 |
<h2 style="padding-left:2em;"><a href="#subplotID" class="wiki-page">subplotID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#subplotID" class="wiki-anchor">¶</a></h2>
|
|
| 1698 |
<h2 style="padding-left:2em;"><a href="#subplotID" class="wiki-page">subplotID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#subplotID" class="wiki-anchor">¶</a></h2>
|
|
| 1692 | 1699 |
|
| 1693 | 1700 |
|
| 1694 | 1701 |
<a name="quadratID"></a> |
| ... | ... | |
| 2019 | 2026 |
|
| 2020 | 2027 |
|
| 2021 | 2028 |
<a name="geologicalContextID"></a> |
| 2022 |
<h2 style="padding-left:2em;"><a href="#geologicalContextID" class="wiki-page">geologicalContextID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#geologicalContextID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#geologicalContextID" class="wiki-anchor">¶</a></h2>
|
|
| 2029 |
<h2 style="padding-left:2em;"><a href="#geologicalContextID" class="wiki-page">geologicalContextID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#geologicalContextID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#geologicalContextID" class="wiki-anchor">¶</a></h2>
|
|
| 2023 | 2030 |
|
| 2024 | 2031 |
|
| 2025 | 2032 |
<a name="earliestEonOrLowestEonothem"></a> |
| ... | ... | |
| 2095 | 2102 |
|
| 2096 | 2103 |
|
| 2097 | 2104 |
<a name="communityID"></a> |
| 2098 |
<h2 style="padding-left:2em;"><a href="#communityID" class="wiki-page">communityID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#communityID" class="wiki-anchor">¶</a></h2>
|
|
| 2105 |
<h2 style="padding-left:2em;"><a href="#communityID" class="wiki-page">communityID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#communityID" class="wiki-anchor">¶</a></h2>
|
|
| 2099 | 2106 |
|
| 2100 | 2107 |
|
| 2101 | 2108 |
<p style="padding-left:5em;">"A community type is an abstract grouping of organisms that tend to co-occur on the landscape due to shared ecological requirements or preferences. May be designated by syntaxon or physiognomic types." (<a href="#VegX" class="wiki-page">VegX</a>)</p> |
| ... | ... | |
| 2147 | 2154 |
|
| 2148 | 2155 |
|
| 2149 | 2156 |
<a name="taxonID"></a> |
| 2150 |
<h2 style="padding-left:2em;"><a href="#taxonID" class="wiki-page">taxonID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#taxonID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#taxonID" class="wiki-anchor">¶</a></h2>
|
|
| 2157 |
<h2 style="padding-left:2em;"><a href="#taxonID" class="wiki-page">taxonID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#taxonID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#taxonID" class="wiki-anchor">¶</a></h2>
|
|
| 2151 | 2158 |
|
| 2152 | 2159 |
|
| 2153 | 2160 |
<a name="parentTaxonID"></a> |
| 2154 |
<h2 style="padding-left:2em;"><a href="#parentTaxonID" class="wiki-page">parentTaxonID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#parentTaxonID" class="wiki-anchor">¶</a></h2>
|
|
| 2161 |
<h2 style="padding-left:2em;"><a href="#parentTaxonID" class="wiki-page">parentTaxonID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#parentTaxonID" class="wiki-anchor">¶</a></h2>
|
|
| 2155 | 2162 |
|
| 2156 | 2163 |
|
| 2157 | 2164 |
<p style="padding-left:5em;">Related: <a href="#taxonID" class="wiki-page">taxonID</a>, <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plantstatus&entity=dba_tabledescription&where=where_tablename#plantParent_ID" class="external">VegBank:plantParent_ID</a></p> |
| 2158 | 2165 |
|
| 2159 | 2166 |
|
| 2160 | 2167 |
<a name="scientificNameID"></a> |
| 2161 |
<h2 style="padding-left:2em;"><a href="#scientificNameID" class="wiki-page">scientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#scientificNameID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#scientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2168 |
<h2 style="padding-left:2em;"><a href="#scientificNameID" class="wiki-page">scientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#scientificNameID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#scientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2162 | 2169 |
|
| 2163 | 2170 |
|
| 2164 | 2171 |
<a name="parentScientificNameID"></a> |
| 2165 |
<h2 style="padding-left:2em;"><a href="#parentScientificNameID" class="wiki-page">parentScientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#parentScientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2172 |
<h2 style="padding-left:2em;"><a href="#parentScientificNameID" class="wiki-page">parentScientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#parentScientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2166 | 2173 |
|
| 2167 | 2174 |
|
| 2168 | 2175 |
<p style="padding-left:5em;">Related: <a href="#scientificNameID" class="wiki-page">scientificNameID</a>, <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plantstatus&entity=dba_tabledescription&where=where_tablename#plantParent_ID" class="external">VegBank:plantParent_ID</a></p> |
| 2169 | 2176 |
|
| 2170 | 2177 |
|
| 2171 | 2178 |
<a name="parentNameUsageID"></a> |
| 2172 |
<h2 style="padding-left:2em;"><a href="#parentNameUsageID" class="wiki-page">parentNameUsageID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#parentNameUsageID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#parentNameUsageID" class="wiki-anchor">¶</a></h2>
|
|
| 2179 |
<h2 style="padding-left:2em;"><a href="#parentNameUsageID" class="wiki-page">parentNameUsageID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#parentNameUsageID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#parentNameUsageID" class="wiki-anchor">¶</a></h2>
|
|
| 2173 | 2180 |
|
| 2174 | 2181 |
|
| 2175 | 2182 |
<a name="namePublishedInID"></a> |
| 2176 |
<h2 style="padding-left:2em;"><a href="#namePublishedInID" class="wiki-page">namePublishedInID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#namePublishedInID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#namePublishedInID" class="wiki-anchor">¶</a></h2>
|
|
| 2183 |
<h2 style="padding-left:2em;"><a href="#namePublishedInID" class="wiki-page">namePublishedInID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#namePublishedInID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#namePublishedInID" class="wiki-anchor">¶</a></h2>
|
|
| 2177 | 2184 |
|
| 2178 | 2185 |
|
| 2179 | 2186 |
<a name="scientificName"></a> |
| ... | ... | |
| 2230 | 2237 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#species_VegBank" class="wiki-page">species_VegBank</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://vegbank.org/vegbank/views/dba_fielddescription_detail.jsp?view=detail&wparam=1263&entity=dba_fielddescription#plantStatus/plantLevel/Species"><img src="_" style="font-size: small;" title="VegBank" alt="VegBank" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="alternative of" alt="alternative of" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#species"><img src="_" style="font-size: small;" title="?species" alt="?species" /></a><a href="#species_VegBank" class="wiki-anchor">¶</a></h3> |
| 2231 | 2238 |
|
| 2232 | 2239 |
|
| 2233 |
<a name="speciesBinomialWithMorphospecies"></a>
|
|
| 2234 |
<h2 style="padding-left:2em;"><a href="#speciesBinomialWithMorphospecies" class="wiki-page">speciesBinomialWithMorphospecies</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien_web&table=observation&target=tbl_structure.php#taxonMorphospecies"><img src="_" style="font-size: small;" title="BIEN2" alt="BIEN2" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="mailto:bboyleATemail.arizona.edu/2012-2-6"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="mailto:bboyleATemail.arizona.edu/2013-2-8"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#speciesBinomialWithMorphospecies" class="wiki-anchor">¶</a></h2>
|
|
| 2240 |
<a name="taxonMorphospecies"></a>
|
|
| 2241 |
<h2 style="padding-left:2em;"><a href="#taxonMorphospecies" class="wiki-page">taxonMorphospecies</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien_web&table=observation&target=tbl_structure.php#taxonMorphospecies"><img src="_" style="font-size: small;" title="BIEN2" alt="BIEN2" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="mailto:bboyleATemail.arizona.edu/2012-2-6"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#taxonMorphospecies" class="wiki-anchor">¶</a></h2>
|
|
| 2235 | 2242 |
|
| 2236 | 2243 |
|
| 2237 | 2244 |
<p style="padding-left:5em;">"To be safe, we always combine the `taxon` plus `morphospecies` to produce a unique string, `taxonMorphospecies`" (<a href="mailto:bboyleATemail.arizona.edu/2012-2-6">Brad Boyle</a>)</p> |
| 2238 | 2245 |
|
| 2239 | 2246 |
|
| 2240 |
<p style="padding-left:5em;"><a href="mailto:bboyleATemail.arizona.edu/2013-2-8">Brad Boyle</a>:<br /><pre> |
|
| 2241 |
# Reconstruct morphospecies using accepted names |
|
| 2242 |
UPDATE observations |
|
| 2243 |
SET morphospecies= |
|
| 2247 |
<p style="padding-left:5em;"><a href="mailto:bboyleATemail.arizona.edu?Brad_Boyle.2013-2-8-12:41PT.Modification+to+use+of+TNRS+for+scrubbing+BIEN+names.(Modifications+to+procedure+to+scrubbing+names+using+TNRS.docx)#page=4">e-mail from Brad</a>:<br /><pre><code class="SQL syntaxhl"><span class="CodeRay"><span class="comment"># Reconstruct morphospecies using accepted names</span> |
|
| 2248 |
<span class="class">UPDATE</span> observations |
|
| 2249 |
<span class="class">SET</span> morphospecies= |
|
| 2244 | 2250 |
TRIM( |
| 2245 |
IF(acceptedSpecies IS NOT NULL,acceptedSpecies,
|
|
| 2246 |
IF(acceptedGenus IS NOT NULL,CONCAT(acceptedGenus," ",unmatchedTerms),
|
|
| 2247 |
IF(acceptedFamily IS NOT NULL,CONCAT(acceptedFamily," ",unmatchedTerms),
|
|
| 2248 |
IF(unmatchedTerms IS NOT NULL,unmatchedTerms,nameSubmitted)
|
|
| 2251 |
<span class="keyword">IF</span>(acceptedSpecies <span class="keyword">IS</span> <span class="keyword">NOT</span> <span class="predefined-constant">NULL</span>,acceptedSpecies,
|
|
| 2252 |
<span class="keyword">IF</span>(acceptedGenus <span class="keyword">IS</span> <span class="keyword">NOT</span> <span class="predefined-constant">NULL</span>,CONCAT(acceptedGenus,<span class="string"><span class="delimiter">"</span><span class="content"> </span><span class="delimiter">"</span></span>,unmatchedTerms),
|
|
| 2253 |
<span class="keyword">IF</span>(acceptedFamily <span class="keyword">IS</span> <span class="keyword">NOT</span> <span class="predefined-constant">NULL</span>,CONCAT(acceptedFamily,<span class="string"><span class="delimiter">"</span><span class="content"> </span><span class="delimiter">"</span></span>,unmatchedTerms),
|
|
| 2254 |
<span class="keyword">IF</span>(unmatchedTerms <span class="keyword">IS</span> <span class="keyword">NOT</span> <span class="predefined-constant">NULL</span>,unmatchedTerms,nameSubmitted)
|
|
| 2249 | 2255 |
) |
| 2250 | 2256 |
) |
| 2251 | 2257 |
) |
| 2252 | 2258 |
); |
| 2253 |
</pre></p> |
|
| 2259 |
</span></code></pre></p>
|
|
| 2254 | 2260 |
|
| 2255 | 2261 |
|
| 2256 |
<a name="taxonMorphospecies"></a>
|
|
| 2257 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#taxonMorphospecies" class="wiki-page">taxonMorphospecies</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien_web&table=observation&target=tbl_structure.php#taxonMorphospecies"><img src="_" style="font-size: small;" title="BIEN2" alt="BIEN2" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="mailto:bboyleATemail.arizona.edu/2012-2-6"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#taxonMorphospecies" class="wiki-anchor">¶</a></h3>
|
|
| 2262 |
<a name="speciesBinomialWithMorphospecies"></a>
|
|
| 2263 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#speciesBinomialWithMorphospecies" class="wiki-page">speciesBinomialWithMorphospecies</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien_web&table=observation&target=tbl_structure.php#taxonMorphospecies"><img src="_" style="font-size: small;" title="BIEN2" alt="BIEN2" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="mailto:bboyleATemail.arizona.edu/2012-2-6"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="mailto:bboyleATemail.arizona.edu/2013-2-8"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#speciesBinomialWithMorphospecies" class="wiki-anchor">¶</a></h3>
|
|
| 2258 | 2264 |
|
| 2259 | 2265 |
|
| 2260 | 2266 |
<a name="morphospecies_Brad_2"></a> |
| ... | ... | |
| 2474 | 2480 |
|
| 2475 | 2481 |
|
| 2476 | 2482 |
<a name="taxonConceptID"></a> |
| 2477 |
<h2 style="padding-left:2em;"><a href="#taxonConceptID" class="wiki-page">taxonConceptID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#originalNameUsage"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#taxonConceptID" class="wiki-anchor">¶</a></h2>
|
|
| 2483 |
<h2 style="padding-left:2em;"><a href="#taxonConceptID" class="wiki-page">taxonConceptID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#originalNameUsage"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#taxonConceptID" class="wiki-anchor">¶</a></h2>
|
|
| 2478 | 2484 |
|
| 2479 | 2485 |
|
| 2480 | 2486 |
<a name="parentTaxonConceptID"></a> |
| 2481 |
<h2 style="padding-left:2em;"><a href="#parentTaxonConceptID" class="wiki-page">parentTaxonConceptID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#parentTaxonConceptID" class="wiki-anchor">¶</a></h2>
|
|
| 2487 |
<h2 style="padding-left:2em;"><a href="#parentTaxonConceptID" class="wiki-page">parentTaxonConceptID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#parentTaxonConceptID" class="wiki-anchor">¶</a></h2>
|
|
| 2482 | 2488 |
|
| 2483 | 2489 |
|
| 2484 | 2490 |
<p style="padding-left:5em;">Related: <a href="#taxonConceptID" class="wiki-page">taxonConceptID</a>, <a href="http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plantstatus&entity=dba_tabledescription&where=where_tablename#plantParent_ID" class="external">VegBank:plantParent_ID</a></p> |
| ... | ... | |
| 2496 | 2502 |
|
| 2497 | 2503 |
|
| 2498 | 2504 |
<a name="nameAccordingToID"></a> |
| 2499 |
<h2 style="padding-left:2em;"><a href="#nameAccordingToID" class="wiki-page">nameAccordingToID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#nameAccordingToID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#nameAccordingToID" class="wiki-anchor">¶</a></h2>
|
|
| 2505 |
<h2 style="padding-left:2em;"><a href="#nameAccordingToID" class="wiki-page">nameAccordingToID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#nameAccordingToID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#nameAccordingToID" class="wiki-anchor">¶</a></h2>
|
|
| 2500 | 2506 |
|
| 2501 | 2507 |
|
| 2502 | 2508 |
<a name="QualifiedTaxonName"></a> |
| ... | ... | |
| 2520 | 2526 |
|
| 2521 | 2527 |
|
| 2522 | 2528 |
<a name="matchedScientificNameID"></a> |
| 2523 |
<h2 style="padding-left:2em;"><a href="#matchedScientificNameID" class="wiki-page">matchedScientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="analogous to" alt="analogous to" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#scientificNameID"><img src="_" style="font-size: small;" title="scientificNameID" alt="scientificNameID" /></a><a href="#matchedScientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2529 |
<h2 style="padding-left:2em;"><a href="#matchedScientificNameID" class="wiki-page">matchedScientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="analogous to" alt="analogous to" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#scientificNameID"><img src="_" style="font-size: small;" title="scientificNameID" alt="scientificNameID" /></a><a href="#matchedScientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2524 | 2530 |
|
| 2525 | 2531 |
|
| 2526 | 2532 |
<a name="Name_matched_url"></a> |
| ... | ... | |
| 2710 | 2716 |
|
| 2711 | 2717 |
|
| 2712 | 2718 |
<a name="acceptedNameUsageID"></a> |
| 2713 |
<h2 style="padding-left:2em;"><a href="#acceptedNameUsageID" class="wiki-page">acceptedNameUsageID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#acceptedNameUsageID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#acceptedNameUsageID" class="wiki-anchor">¶</a></h2>
|
|
| 2719 |
<h2 style="padding-left:2em;"><a href="#acceptedNameUsageID" class="wiki-page">acceptedNameUsageID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#acceptedNameUsageID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#acceptedNameUsageID" class="wiki-anchor">¶</a></h2>
|
|
| 2714 | 2720 |
|
| 2715 | 2721 |
|
| 2716 | 2722 |
<a name="acceptedNameUsage"></a> |
| ... | ... | |
| 2718 | 2724 |
|
| 2719 | 2725 |
|
| 2720 | 2726 |
<a name="acceptedScientificNameID"></a> |
| 2721 |
<h2 style="padding-left:2em;"><a href="#acceptedScientificNameID" class="wiki-page">acceptedScientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="analogous to" alt="analogous to" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#scientificNameID"><img src="_" style="font-size: small;" title="scientificNameID" alt="scientificNameID" /></a><a href="#acceptedScientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2727 |
<h2 style="padding-left:2em;"><a href="#acceptedScientificNameID" class="wiki-page">acceptedScientificNameID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="analogous to" alt="analogous to" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#scientificNameID"><img src="_" style="font-size: small;" title="scientificNameID" alt="scientificNameID" /></a><a href="#acceptedScientificNameID" class="wiki-anchor">¶</a></h2>
|
|
| 2722 | 2728 |
|
| 2723 | 2729 |
|
| 2724 | 2730 |
<a name="acceptedTaxonName"></a> |
| ... | ... | |
| 2825 | 2831 |
|
| 2826 | 2832 |
|
| 2827 | 2833 |
<a name="taxonOccurrencePkey"></a> |
| 2828 |
<h2 style="padding-left:2em;"><a href="#taxonOccurrencePkey" class="wiki-page">taxonOccurrencePkey</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#taxonOccurrencePkey" class="wiki-anchor">¶</a></h2>
|
|
| 2834 |
<h2 style="padding-left:2em;"><a href="#taxonOccurrencePkey" class="wiki-page">taxonOccurrencePkey</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#taxonOccurrencePkey" class="wiki-anchor">¶</a></h2>
|
|
| 2829 | 2835 |
|
| 2830 | 2836 |
|
| 2831 | 2837 |
<p style="padding-left:5em;">Related: <a href="#taxonOccurrenceID" class="wiki-page">taxonOccurrenceID</a></p> |
| 2832 | 2838 |
|
| 2833 | 2839 |
|
| 2834 | 2840 |
<a name="taxonOccurrenceID"></a> |
| 2835 |
<h2 style="padding-left:2em;"><a href="#taxonOccurrenceID" class="wiki-page">taxonOccurrenceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#taxonOccurrenceID" class="wiki-anchor">¶</a></h2>
|
|
| 2841 |
<h2 style="padding-left:2em;"><a href="#taxonOccurrenceID" class="wiki-page">taxonOccurrenceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#taxonOccurrenceID" class="wiki-anchor">¶</a></h2>
|
|
| 2836 | 2842 |
|
| 2837 | 2843 |
|
| 2838 | 2844 |
<a name="taxonNameUsageConceptID"></a> |
| ... | ... | |
| 2908 | 2914 |
|
| 2909 | 2915 |
|
| 2910 | 2916 |
<a name="identificationID"></a> |
| 2911 |
<h2 style="padding-left:2em;"><a href="#identificationID" class="wiki-page">identificationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#identificationID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#identificationID" class="wiki-anchor">¶</a></h2>
|
|
| 2917 |
<h2 style="padding-left:2em;"><a href="#identificationID" class="wiki-page">identificationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#identificationID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#identificationID" class="wiki-anchor">¶</a></h2>
|
|
| 2912 | 2918 |
|
| 2913 | 2919 |
|
| 2914 | 2920 |
<a name="identificationType"></a> |
| ... | ... | |
| 3010 | 3016 |
|
| 3011 | 3017 |
|
| 3012 | 3018 |
<a name="originalNameUsageID"></a> |
| 3013 |
<h2 style="padding-left:2em;"><a href="#originalNameUsageID" class="wiki-page">originalNameUsageID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#originalNameUsageID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#originalNameUsageID" class="wiki-anchor">¶</a></h2>
|
|
| 3019 |
<h2 style="padding-left:2em;"><a href="#originalNameUsageID" class="wiki-page">originalNameUsageID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#originalNameUsageID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#originalNameUsageID" class="wiki-anchor">¶</a></h2>
|
|
| 3014 | 3020 |
|
| 3015 | 3021 |
|
| 3016 | 3022 |
<a name="originalNameUsage"></a> |
| ... | ... | |
| 3125 | 3131 |
|
| 3126 | 3132 |
|
| 3127 | 3133 |
<a name="aggregateOrganismObservationID"></a> |
| 3128 |
<h2 style="padding-left:2em;"><a href="#aggregateOrganismObservationID" class="wiki-page">aggregateOrganismObservationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/aggregateOrganismObservations/aggregateOrganismObservation/@id"><img src="_" style="font-size: small;" title="VegX" alt="VegX" /></a><a href="#aggregateOrganismObservationID" class="wiki-anchor">¶</a></h2>
|
|
| 3134 |
<h2 style="padding-left:2em;"><a href="#aggregateOrganismObservationID" class="wiki-page">aggregateOrganismObservationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/aggregateOrganismObservations/aggregateOrganismObservation/@id"><img src="_" style="font-size: small;" title="VegX" alt="VegX" /></a><a href="#aggregateOrganismObservationID" class="wiki-anchor">¶</a></h2>
|
|
| 3129 | 3135 |
|
| 3130 | 3136 |
|
| 3131 | 3137 |
<a name="aggregateOccurrenceID"></a> |
| ... | ... | |
| 3211 | 3217 |
|
| 3212 | 3218 |
|
| 3213 | 3219 |
<a name="individualID"></a> |
| 3214 |
<h2 style="padding-left:2em;"><a href="#individualID" class="wiki-page">individualID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#individualID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#individualID" class="wiki-anchor">¶</a></h2>
|
|
| 3220 |
<h2 style="padding-left:2em;"><a href="#individualID" class="wiki-page">individualID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#individualID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#individualID" class="wiki-anchor">¶</a></h2>
|
|
| 3215 | 3221 |
|
| 3216 | 3222 |
|
| 3217 | 3223 |
<a name="tag"></a> |
| ... | ... | |
| 3242 | 3248 |
|
| 3243 | 3249 |
|
| 3244 | 3250 |
<a name="PlotObservation_SALVIAS"></a> |
| 3245 |
<h3 style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#PlotObservation_SALVIAS" class="wiki-page">PlotObservation_SALVIAS</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=PlotObservations&target=tbl_structure.php"><img src="_" style="font-size: small;" title="SALVIAS" alt="SALVIAS" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="sftp://vegbiendev.nceas.ucsb.edu/home/bien/svn/inputs/Madidi/IndividualObservation/Plot_Observations_Export_PP_Yarimi_9.csv"><img src="_" style="font-size: small;" title="Madidi" alt="Madidi" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="alternative of" alt="alternative of" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#PlotObservation"><img src="_" style="font-size: small;" title="?PlotObservation" alt="?PlotObservation" /></a><a href="#PlotObservation_SALVIAS" class="wiki-anchor">¶</a></h3>
|
|
| 3251 |
<h3 style="padding-left:2em;"><img src="_" style="padding: 0 0.3em 3pt 0.75em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#PlotObservation_SALVIAS" class="wiki-page">PlotObservation_SALVIAS</a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=PlotObservations&target=tbl_structure.php"><img src="_" style="font-size: small;" title="SALVIAS" alt="SALVIAS" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="sftp://vegbiendev.nceas.ucsb.edu/home/bien/inputs/Madidi/IndividualObservation/Plot_Observations_Export_PP_Yarimi_9.csv"><img src="_" style="font-size: small;" title="Madidi" alt="Madidi" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="alternative of" alt="alternative of" /> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore#PlotObservation"><img src="_" style="font-size: small;" title="?PlotObservation" alt="?PlotObservation" /></a><a href="#PlotObservation_SALVIAS" class="wiki-anchor">¶</a></h3> |
|
| 3246 | 3252 |
|
| 3247 | 3253 |
|
| 3248 | 3254 |
<p style="padding-left:3em;">Related: <a href="#Individual" class="wiki-page">Individual</a></p> |
| 3249 | 3255 |
|
| 3250 | 3256 |
|
| 3251 | 3257 |
<a name="individualObservationID"></a> |
| 3252 |
<h2 style="padding-left:2em;"><a href="#individualObservationID" class="wiki-page">individualObservationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a><a href="#individualObservationID" class="wiki-anchor">¶</a></h2>
|
|
| 3258 |
<h2 style="padding-left:2em;"><a href="#individualObservationID" class="wiki-page">individualObservationID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a><a href="#individualObservationID" class="wiki-anchor">¶</a></h2>
|
|
| 3253 | 3259 |
|
| 3254 | 3260 |
|
| 3255 | 3261 |
<p style="padding-left:5em;">The unique identifier for the observation of an individual</p> |
| ... | ... | |
| 3410 | 3416 |
|
| 3411 | 3417 |
|
| 3412 | 3418 |
<a name="stemID"></a> |
| 3413 |
<h2 style="padding-left:2em;"><a href="#stemID" class="wiki-page">stemID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#stem_id"><img src="_" style="font-size: small;" title="SALVIAS" alt="SALVIAS" /></a><a href="#stemID" class="wiki-anchor">¶</a></h2>
|
|
| 3419 |
<h2 style="padding-left:2em;"><a href="#stemID" class="wiki-page">stemID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#stem_id"><img src="_" style="font-size: small;" title="SALVIAS" alt="SALVIAS" /></a><a href="#stemID" class="wiki-anchor">¶</a></h2>
|
|
| 3414 | 3420 |
|
| 3415 | 3421 |
|
| 3416 | 3422 |
<a name="stemTag"></a> |
| ... | ... | |
| 3562 | 3568 |
|
| 3563 | 3569 |
|
| 3564 | 3570 |
<a name="collection"></a> |
| 3565 |
<h2 style="padding-left:2em;"><a href="#collection" class="wiki-page">collection</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#collectionCode"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/collectionCode"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#collection" class="wiki-anchor">¶</a></h2>
|
|
| 3571 |
<h2 style="padding-left:2em;"><a href="#collection" class="wiki-page">collection</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#collectionCode"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/collectionCode"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#collection" class="wiki-anchor">¶</a></h2>
|
|
| 3566 | 3572 |
|
| 3567 | 3573 |
|
| 3568 | 3574 |
<p style="padding-left:5em;">"the collection within the institution where a specimen is held. This is not an important field for herbaria because the herbarium acronym (institutionCode) is already globally unique. Herbaria typically use a word describing the type of collection, such as "herbarium", although I have also seen the acronym repeated here. Needed for animal collections where institutionCode is the name of a university and collectionCode distinguishes one of several collections (e.g., institutionCode="University of Colorado", collectionCode="Mammals"). In general, use whatever the data provider provides, unless badly formed." (<a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/collectionCode" class="external">Brad Boyle</a>)</p> |
| ... | ... | |
| 3573 | 3579 |
|
| 3574 | 3580 |
|
| 3575 | 3581 |
<a name="collectionURL"></a> |
| 3576 |
<h2 style="padding-left:2em;"><a href="#collectionURL" class="wiki-page">collectionURL</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#collectionID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#collectionURL" class="wiki-anchor">¶</a></h2>
|
|
| 3582 |
<h2 style="padding-left:2em;"><a href="#collectionURL" class="wiki-page">collectionURL</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#collectionID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#collectionURL" class="wiki-anchor">¶</a></h2>
|
|
| 3577 | 3583 |
|
| 3578 | 3584 |
|
| 3579 | 3585 |
<a name="collectionID"></a> |
| 3580 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#collectionID" class="wiki-page">collectionID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#collectionID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#collectionID" class="wiki-anchor">¶</a></h3>
|
|
| 3586 |
<h3 style="padding-left:4em;"><img src="_" style="padding: 0 0.3em 3pt 0.65em;font-weight: normal;" title="Synonym:" alt="Synonym:" /> <a href="#collectionID" class="wiki-page">collectionID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#collectionID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#collectionID" class="wiki-anchor">¶</a></h3>
|
|
| 3581 | 3587 |
|
| 3582 | 3588 |
|
| 3583 | 3589 |
<a name="Specimen"></a> |
| ... | ... | |
| 3619 | 3625 |
|
| 3620 | 3626 |
|
| 3621 | 3627 |
<a name="specimenHolderURL"></a> |
| 3622 |
<h2 style="padding-left:2em;"><a href="#specimenHolderURL" class="wiki-page">specimenHolderURL</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#institutionID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/institutionCode/where_specimen_held"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#specimenHolderURL" class="wiki-anchor">¶</a></h2>
|
|
| 3628 |
<h2 style="padding-left:2em;"><a href="#specimenHolderURL" class="wiki-page">specimenHolderURL</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#institutionID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/institutionCode/where_specimen_held"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#specimenHolderURL" class="wiki-anchor">¶</a></h2>
|
|
| 3623 | 3629 |
|
| 3624 | 3630 |
|
| 3625 | 3631 |
<a name="institutionID"></a> |
| ... | ... | |
| 3639 | 3645 |
|
| 3640 | 3646 |
|
| 3641 | 3647 |
<a name="specimenDonorInstitution"></a> |
| 3642 |
<h2 style="padding-left:2em;"><a href="#specimenDonorInstitution" class="wiki-page">specimenDonorInstitution</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode/institution_that_donated_collection"><img src="_" style="font-size: small;" title="Bob Peet" alt="Bob Peet" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/institutionCode/acronym_that_sent_specimen"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#specimenDonorInstitution" class="wiki-anchor">¶</a></h2>
|
|
| 3648 |
<h2 style="padding-left:2em;"><a href="#specimenDonorInstitution" class="wiki-page">specimenDonorInstitution</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode/institution_that_donated_collection"><img src="_" style="font-size: small;" title="Bob Peet" alt="Bob Peet" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/institutionCode/acronym_that_sent_specimen"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#specimenDonorInstitution" class="wiki-anchor">¶</a></h2>
|
|
| 3643 | 3649 |
|
| 3644 | 3650 |
|
| 3645 | 3651 |
<p style="padding-left:5em;">"The name or acronym in use by the institution that donated the collection" (<a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode" class="external">Bob Peet</a>)<br />"the acronym [of the donor institution] that sent [...] the specimen if it was an exchange or trade" (<a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/institutionCode/acronym_that_sent_specimen" class="external">Brad Boyle</a>)</p> |
| ... | ... | |
| 3650 | 3656 |
|
| 3651 | 3657 |
|
| 3652 | 3658 |
<a name="specimenOwner"></a> |
| 3653 |
<h2 style="padding-left:2em;"><a href="#specimenOwner" class="wiki-page">specimenOwner</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#ownerInstitutionCode"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#specimenOwner" class="wiki-anchor">¶</a></h2>
|
|
| 3659 |
<h2 style="padding-left:2em;"><a href="#specimenOwner" class="wiki-page">specimenOwner</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#ownerInstitutionCode"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#specimenOwner" class="wiki-anchor">¶</a></h2>
|
|
| 3654 | 3660 |
|
| 3655 | 3661 |
|
| 3656 | 3662 |
<p style="padding-left:5em;">The institution which owns the specimen. This is <a href="#specimenHolderInstitution" class="wiki-page">specimenHolderInstitution</a> if the specimen was donated or <a href="#specimenDonorInstitution" class="wiki-page">specimenDonorInstitution</a> if it was lent.</p> |
| ... | ... | |
| 3661 | 3667 |
|
| 3662 | 3668 |
|
| 3663 | 3669 |
<a name="specimenStampingInstitution"></a> |
| 3664 |
<h2 style="padding-left:2em;"><a href="#specimenStampingInstitution" class="wiki-page">specimenStampingInstitution</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode/institution_that_donated_collection"><img src="_" style="font-size: small;" title="Bob Peet" alt="Bob Peet" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/institutionCode/acronym_that_sent_specimen"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#specimenStampingInstitution" class="wiki-anchor">¶</a></h2>
|
|
| 3670 |
<h2 style="padding-left:2em;"><a href="#specimenStampingInstitution" class="wiki-page">specimenStampingInstitution</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode/institution_that_donated_collection"><img src="_" style="font-size: small;" title="Bob Peet" alt="Bob Peet" /></a> <img src="_" style="font-size: small;" title="|" alt="|" /> <a href="https://projects.nceas.ucsb.edu/nceas/attachments/download/626/vegbien_identifiers.xlsx#terms/institutionCode/acronym_that_sent_specimen"><img src="_" style="font-size: small;" title="Brad Boyle" alt="Brad Boyle" /></a><a href="#specimenStampingInstitution" class="wiki-anchor">¶</a></h2>
|
|
| 3665 | 3671 |
|
| 3666 | 3672 |
|
| 3667 | 3673 |
<p style="padding-left:5em;">The institution that stamped an <a href="#accessionNumber" class="wiki-page">accession number</a> or <a href="#barcode" class="wiki-page">barcode</a> on the specimen</p> |
| ... | ... | |
| 3799 | 3805 |
|
| 3800 | 3806 |
|
| 3801 | 3807 |
<a name="measurementID"></a> |
| 3802 |
<h2 style="padding-left:2em;"><a href="#measurementID" class="wiki-page">measurementID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#measurementID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#measurementID" class="wiki-anchor">¶</a></h2>
|
|
| 3808 |
<h2 style="padding-left:2em;"><a href="#measurementID" class="wiki-page">measurementID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#measurementID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#measurementID" class="wiki-anchor">¶</a></h2>
|
|
| 3803 | 3809 |
|
| 3804 | 3810 |
|
| 3805 | 3811 |
<a name="measurementName"></a> |
| ... | ... | |
| 3858 | 3864 |
|
| 3859 | 3865 |
|
| 3860 | 3866 |
<a name="resourceRelationshipID"></a> |
| 3861 |
<h2 style="padding-left:2em;"><a href="#resourceRelationshipID" class="wiki-page">resourceRelationshipID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#resourceRelationshipID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#resourceRelationshipID" class="wiki-anchor">¶</a></h2>
|
|
| 3867 |
<h2 style="padding-left:2em;"><a href="#resourceRelationshipID" class="wiki-page">resourceRelationshipID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#resourceRelationshipID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#resourceRelationshipID" class="wiki-anchor">¶</a></h2>
|
|
| 3862 | 3868 |
|
| 3863 | 3869 |
|
| 3864 | 3870 |
<a name="resourceID"></a> |
| 3865 |
<h2 style="padding-left:2em;"><a href="#resourceID" class="wiki-page">resourceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#resourceID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#resourceID" class="wiki-anchor">¶</a></h2>
|
|
| 3871 |
<h2 style="padding-left:2em;"><a href="#resourceID" class="wiki-page">resourceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#resourceID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#resourceID" class="wiki-anchor">¶</a></h2>
|
|
| 3866 | 3872 |
|
| 3867 | 3873 |
|
| 3868 | 3874 |
<a name="relatedResourceID"></a> |
| 3869 |
<h2 style="padding-left:2em;"><a href="#relatedResourceID" class="wiki-page">relatedResourceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="global ID" alt="global ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#relatedResourceID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#relatedResourceID" class="wiki-anchor">¶</a></h2>
|
|
| 3875 |
<h2 style="padding-left:2em;"><a href="#relatedResourceID" class="wiki-page">relatedResourceID</a> <a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs"><img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;font-style: italic;" title="text ID" alt="text ID" /></a> <img src="_" style="padding-left: 1em;font-size: small;font-weight: normal;" title="from" alt="from" /> <a href="http://rs.tdwg.org/dwc/terms/#relatedResourceID"><img src="_" style="font-size: small;" title="DwC" alt="DwC" /></a><a href="#relatedResourceID" class="wiki-anchor">¶</a></h2>
|
|
| 3870 | 3876 |
|
| 3871 | 3877 |
|
| 3872 | 3878 |
<a name="relatedCatalogItem"></a> |
| ... | ... | |
| 3913 | 3919 |
<p style="padding-left:5em;">The reason for omission should be described in the mapping's comments</p> |
| 3914 | 3920 |
|
| 3915 | 3921 |
|
| 3922 |
<p style="padding-left:5em;">Use the format <code>OMIT#this_field</code></p> |
|
| 3923 |
|
|
| 3924 |
|
|
| 3916 | 3925 |
<p style="padding-left:5em;">When possible, use one of the more specific terms below:</p> |
| 3917 | 3926 |
|
| 3918 | 3927 |
|
| ... | ... | |
| 3984 | 3993 |
<h2 style="padding-left:4em;"><a href="http://rs.tdwg.org/dwc/terms/" title="Darwin Core" class="external">DwC</a><a href="#DwC" class="wiki-anchor">¶</a></h2> |
| 3985 | 3994 |
|
| 3986 | 3995 |
|
| 3987 |
<p style="padding-left:8em;">VegCore includes all Darwin Core terms (some have been renamed)</p> |
|
| 3996 |
<p style="padding-left:8em;">VegCore includes all Darwin Core terms (some have been renamed, eg. to clarify what kind of entity a term is referring to, since this might not be a specimen)</p>
|
|
| 3988 | 3997 |
|
| 3989 | 3998 |
|
| 3990 | 3999 |
<a name="DwC-terms"></a> |
| ... | ... | |
| 4019 | 4028 |
<h2 style="padding-left:2em;">Aggregators<a href="#Aggregators" class="wiki-anchor">¶</a></h2> |
| 4020 | 4029 |
|
| 4021 | 4030 |
|
| 4031 |
<a name="TNRS"></a> |
|
| 4032 |
<h2 style="padding-left:4em;"><a href="http://tnrs.iplantcollaborative.org/instructions.html" title="Taxonomic Name Resolution Service" class="external">TNRS</a><a href="#TNRS" class="wiki-anchor">¶</a></h2> |
|
| 4033 |
|
|
| 4034 |
|
|
| 4022 | 4035 |
<a name="VegBank"></a> |
| 4023 | 4036 |
<h2 style="padding-left:4em;"><a href="http://vegbank.org/vegbank/views/dba_tabledescription_index.jsp?view=index&entity=dba_tabledescription" class="external">VegBank</a><a href="#VegBank" class="wiki-anchor">¶</a></h2> |
| 4024 | 4037 |
|
| ... | ... | |
| 4027 | 4040 |
<h2 style="padding-left:4em;"><a href="http://salvias.net/Documents/salvias_data_dictionary.html" class="external">SALVIAS</a><a href="#SALVIAS" class="wiki-anchor">¶</a></h2> |
| 4028 | 4041 |
|
| 4029 | 4042 |
|
| 4043 |
<a name="VegBIEN"></a> |
|
| 4044 |
<h2 style="padding-left:4em;"><a href="http://vegpath.org/VegBIEN" class="external">VegBIEN</a><a href="#VegBIEN" class="wiki-anchor">¶</a></h2> |
|
| 4045 |
|
|
| 4046 |
|
|
| 4030 | 4047 |
<a name="BIEN2"></a> |
| 4031 | 4048 |
<h2 style="padding-left:4em;"><a href="http://bien.nceas.ucsb.edu/bien/bien-database-summary-statistics/bien-2/" title="Botanical Information and Ecology Network" class="external">BIEN2</a><a href="#BIEN2" class="wiki-anchor">¶</a></h2> |
| 4032 | 4049 |
|
| ... | ... | |
| 4047 | 4064 |
<h2 style="padding-left:2em;">Primary databases<a href="#Primary-databases" class="wiki-anchor">¶</a></h2> |
| 4048 | 4065 |
|
| 4049 | 4066 |
|
| 4050 |
<a name="TNRS"></a> |
|
| 4051 |
<h2 style="padding-left:4em;"><a href="http://tnrs.iplantcollaborative.org/instructions.html" title="Taxonomic Name Resolution Service" class="external">TNRS</a><a href="#TNRS" class="wiki-anchor">¶</a></h2> |
|
| 4052 |
|
|
| 4053 |
|
|
| 4054 | 4067 |
<a name="CTFS"></a> |
| 4055 | 4068 |
<h2 style="padding-left:4em;"><a href="http://www.ctfs.si.edu/" title="Center for Tropical Forest Science" class="external">CTFS</a><a href="#CTFS" class="wiki-anchor">¶</a></h2> |
| 4056 | 4069 |
|
| ... | ... | |
| 4063 | 4076 |
<h3 style="padding-left:8em;"><a href="https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/entry/inputs/CTFS/_archive/DBv5.txt" class="external">CTFS-v5</a><a href="#CTFS-v5" class="wiki-anchor">¶</a></h3> |
| 4064 | 4077 |
|
| 4065 | 4078 |
|
| 4066 |
<a name="Data-dictionaries"></a>
|
|
| 4067 |
<h2 style="padding-left:2em;">Data dictionaries<a href="#Data-dictionaries" class="wiki-anchor">¶</a></h2>
|
|
| 4079 |
<a name="People"></a>
|
|
| 4080 |
<h2 style="padding-left:2em;">People<a href="#People" class="wiki-anchor">¶</a></h2>
|
|
| 4068 | 4081 |
|
| 4069 | 4082 |
|
| 4070 | 4083 |
<a name="Brad-Boyle"></a> |
| ... | ... | |
| 4109 | 4122 |
</ul> |
| 4110 | 4123 |
|
| 4111 | 4124 |
|
| 4112 |
<a name="Tables-2"></a>
|
|
| 4113 |
<h2 style="padding-left:1em;">Tables<a href="#Tables-2" class="wiki-anchor">¶</a></h2>
|
|
| 4125 |
<a name="Tables"></a> |
|
| 4126 |
<h2 style="padding-left:1em;">Tables<a href="#Tables" class="wiki-anchor">¶</a></h2> |
|
| 4114 | 4127 |
|
| 4115 | 4128 |
|
| 4116 | 4129 |
<ul> |
| ... | ... | |
| 4176 | 4189 |
|
| 4177 | 4190 |
|
| 4178 | 4191 |
<pre> |
| 4179 |
h2((. [[VegCore#ID|ID]] !{padding-left: 1em; font-size: small; font-weight: normal; font-style: italic;}_(global ID)!:https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Global_IDs !{padding-left: 1em; font-size: small; font-weight: normal;}_(from)! !{font-size: small;}_(Source)!:URL#fieldAsSpelledBySource
|
|
| 4192 |
h2((. [[VegCore#ID|ID]] !{padding-left: 1em; font-size: small; font-weight: normal; font-style: italic;}_(text ID)!:https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Text_IDs !{padding-left: 1em; font-size: small; font-weight: normal;}_(from)! !{font-size: small;}_(Source)!:URL#fieldAsSpelledBySource
|
|
| 4180 | 4193 |
[...] |
| 4181 | 4194 |
</pre> |
| 4182 | 4195 |
|
| ... | ... | |
| 4273 | 4286 |
|
| 4274 | 4287 |
<p><ul class="pages-hierarchy"> |
| 4275 | 4288 |
<li><a href="/nceas/projects/bien/wiki/Combining_VegCore_and_VegBIEN">Combining VegCore and VegBIEN</a></li> |
| 4276 |
<li><a href="/nceas/projects/bien/wiki/Global_IDs">Global IDs</a> |
|
| 4289 |
<li><a href="/nceas/projects/bien/wiki/Normalized_VegCore_to-dos">Normalized VegCore to-dos</a></li> |
|
| 4290 |
<li><a href="/nceas/projects/bien/wiki/SQL_dotpaths">SQL dotpaths</a></li> |
|
| 4291 |
<li><a href="/nceas/projects/bien/wiki/Text_IDs">Text IDs</a> |
|
| 4277 | 4292 |
<ul class="pages-hierarchy"> |
| 4278 | 4293 |
<li><a href="/nceas/projects/bien/wiki/String_IDs">String IDs</a></li> |
| 4279 | 4294 |
<li><a href="/nceas/projects/bien/wiki/U-name">U-name</a> |
| ... | ... | |
| 4284 | 4299 |
</li> |
| 4285 | 4300 |
</ul> |
| 4286 | 4301 |
</li> |
| 4287 |
<li><a href="/nceas/projects/bien/wiki/Normalized_VegCore_to-dos">Normalized VegCore to-dos</a></li> |
|
| 4288 |
<li><a href="/nceas/projects/bien/wiki/SQL_dotpaths">SQL dotpaths</a></li> |
|
| 4289 | 4302 |
<li><a href="/nceas/projects/bien/wiki/VegCore_refactoring">VegCore refactoring</a></li> |
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Powered by <a href="http://www.redmine.org/">Redmine</a> © 2006-2013 Jean-Philippe Lang
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Powered by <a href="http://www.redmine.org/">Redmine</a> © 2006-2014 Jean-Philippe Lang
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</div></div> |
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Also available in: Unified diff
mappings/VegCore.htm: regenerated from wiki. made verbatimLocality a synonym of locality since they are used to store the same data.