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root/inputs/SALVIAS/maps/VegX.plots.csv @ 1755

1 174 aaronmk 
"SALVIAS:plotMetadata","VegX:/*s/plotObservation","Comments"
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"PlotID",":[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/simpleUserdefined[name=sourceAccessionCode]/value","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
3 174 aaronmk 
"orig_filename",,
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"AccessCode",,
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"project_id","/*ID->/*s/project:[personnel[role=metadataProvider]/organizationName=$/_ignore/inLabel]/title",
6 174 aaronmk 
"PrimOwnerID",,
7 1086 aaronmk 
"SiteCode",":[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier","Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)"
8 174 aaronmk 
"SiteName",,
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"new_world",,
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"MajorGeo","/*UniqueIdentifierID->/*s/plot/location[placeType=continent]/placeName",
11 
"Country","/*UniqueIdentifierID->/*s/plot/location[placeType=country]/placeName",
12 
"PolDiv1","/*UniqueIdentifierID->/*s/plot/location[placeType=state]/placeName","Brad: No; pol1=stateProvince"
13 174 aaronmk 
"pol1_type",,
14 1419 aaronmk 
"pol2","/*UniqueIdentifierID->/*s/plot/location[placeType=county]/placeName","Brad: No pol2=countyParish"
15 174 aaronmk 
"pol2_type",,
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"lat_string",,
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"long_string",,
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"LatDec","/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude",
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"LongDec","/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLongitude",
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"lat_long_accuracy",,
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"Elev","/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation","Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick."
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"elev_max_m","/*UniqueIdentifierID->/*s/plot/geospatial/maximumElevationInMeters",
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"elev_min_m","/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters",
24 1725 aaronmk 
"Precip","/simpleUserdefined[name=precipitation]/value",
25 174 aaronmk 
"ElevSource",,
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"Temp","/temperature",
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"PrecipSource",,
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"TempSource",,
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"bearing",,
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"slope_aspect","/*UniqueIdentifierID->/*s/plot/slopeAspect",
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"slope_gradient","/*UniqueIdentifierID->/*s/plot/slopeGradient",
32 1727 aaronmk 
"clay_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=clay]/value/_units:[default=""%"",to=]/value",
33 1731 aaronmk 
"silt_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=silt]/value/_units:[default=""%"",to=]/value",
34 1730 aaronmk 
"sand_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sand]/value/_units:[default=""%"",to=]/value",
35 174 aaronmk 
"pH","->/*s/abioticObservation[*ID]/ph","Brad: For all these soil variables, how do we store information on method, units. Seems like an ontological structure would be more appropriate (measurementName, measurementValue, measurementUnits, measurementMethod). Same as BIEN traits table. Something to discuss."
36 1568 aaronmk 
"soil_N","->/*s/abioticObservation[*ID]/nitrogen/_units:[default=""%"",to=]/value",
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"soil_P","->/*s/abioticObservation[*ID]/phosphorus/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",
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"soil_C","->/*s/abioticObservation[*ID]/simpleUserdefined[name=carbon]/value/_units:[default=""%"",to=]/value",
39 1729 aaronmk 
"soil_K","->/*s/abioticObservation[*ID]/potassium/_units:[default=""%"",to=]/value",
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"soil_Mg","->/*s/abioticObservation[*ID]/magnesium/_units:[default=""%"",to=]/value",
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"soil_Ca","->/*s/abioticObservation[*ID]/simpleUserdefined[name=calcium]/value/_units:[default=""%"",to=]/value",
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"soil_Na","->/*s/abioticObservation[*ID]/simpleUserdefined[name=sodium]/value/_units:[default=""%"",to=]/value",
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"soil_acidity","->/*s/abioticObservation[*ID]/simpleUserdefined[name=acidity]/value/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value",
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"soil_base","->/*s/abioticObservation[*ID]/simpleUserdefined[name=base]/value/_units:[default=""%"",to=]/value",
45 1726 aaronmk 
"soil_cation_cap","->/*s/abioticObservation[*ID]/simpleUserdefined[name=cationExchangeCapacity]/value",
46 174 aaronmk 
"soil_conductivity","->/*s/abioticObservation[*ID]/simpleUserdefined[name=conductivity]/value",
47 1728 aaronmk 
"organic_percent","->/*s/abioticObservation[*ID]/simpleUserdefined[name=organic]/value/_units:[default=""%"",to=]/value",
48 1568 aaronmk 
"soil_texture","->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value/_units:[default=""%"",to=]/value",
49 174 aaronmk 
"RevisionComments",,
50 1419 aaronmk 
"Locality_Description","/*UniqueIdentifierID->/*s/plot/locationNarrative","Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"
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"topography_desc",,
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"vegetation_1",,
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"vegetation_2",,
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"Habitat",,
55 612 aaronmk 
"life_zone_code","->/*s/communityDetermination[*ID]/*s/communityConcept/commonName",
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"life_zone","->/*s/communityDetermination[*ID]/*s/communityConcept/name",
57 1724 aaronmk 
"PlotMethod","/simpleUserdefined[name=method]/*ID/method/name",
58 174 aaronmk 
"MethodCode",,
59 
"plot_area_ha","/*UniqueIdentifierID->/*s/plot/area","Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
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"recensused",,"Brad: This is a 0/1 value, internal to SALVIAS. 1 indicates that a  plot has >1 set of values, from different census events.; Aaron: Different censuses are distinguished in organisms data by different census_no values"
61 612 aaronmk 
"date_start","/obsStartDate/_*/date",
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"date_finish","/obsEndDate/_*/date",
63 174 aaronmk 
"plot_administrator",,
64 
"plot_notes",,
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"tmp_del",,