Revision 1812
Added by Aaron Marcuse-Kubitza over 12 years ago
| Makefile | ||
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| 12 | 12 |
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| 13 | 13 |
join = env header_num=1 $(bin)/join_union_sort |
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selfMap = $(bin)/cols 0 0 |
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mkSelfMap = $(selfMap) <$<|$(bin)/sort_map >$@ |
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| 15 | 16 |
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| 16 | 17 |
define chRoot |
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$(bin)/ch_root <$< >$@ |
| ... | ... | |
| 49 | 50 |
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| 50 | 51 |
##### DwC |
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joinMaps :=
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dwcMaps :=
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DwC.cs-VegBIEN.specimens.csv: DwC1-DwC2.specimens.csv DwC2-VegBIEN.specimens.csv |
| 55 | 56 |
$(join) <$+ >$@ |
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joinMaps += DwC.cs-VegBIEN.specimens.csv
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dwcMaps += DwC.cs-VegBIEN.specimens.csv
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| 57 | 58 |
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DwC-VegBIEN.specimens.csv: DwC.cs-VegBIEN.specimens.csv |
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$(bin)/ci_map $< >$@ |
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joinMaps += DwC-VegBIEN.specimens.csv
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dwcMaps += DwC-VegBIEN.specimens.csv
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| 62 | 63 |
DwC.self.specimens.csv: DwC-VegBIEN.specimens.csv |
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$(selfMap) <$<|$(bin)/sort_map >$@
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joinMaps += DwC.self.specimens.csv
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$(mkSelfMap)
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dwcMaps += DwC.self.specimens.csv
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join_maps: $(joinMaps) ;
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join_maps: $(dwcMaps) ;
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all += $(joinMaps)
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all += $(dwcMaps)
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| 69 | 70 |
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##### VegX |
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chRootMaps :=
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vegxMaps :=
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#VegX.self.organisms.csv: VegX-VegBIEN.organisms.csv |
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# $(mkSelfMap) |
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#vegxMaps += VegX.self.organisms.csv |
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VegX-VegBIEN.plots.csv: VegX-VegBIEN.organisms.csv |
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env \ |
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left_in_root='/*s/individualOrganismObservation/*ID->/*s/plotObservation' \ |
| ... | ... | |
| 78 | 83 |
right_in_root='/taxonoccurrence/*_id/locationevent' \ |
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right_out_root='/locationevent' \ |
| 80 | 85 |
$(chRoot) |
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chRootMaps += VegX-VegBIEN.plots.csv
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vegxMaps += VegX-VegBIEN.plots.csv
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| 83 | 88 |
VegX-VegBIEN.stems.csv: VegX-VegBIEN.organisms.csv |
| 84 | 89 |
env \ |
| ... | ... | |
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right_in_root='/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation' \ |
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right_out_root='/stemobservation' \ |
| 89 | 94 |
$(chRoot) |
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chRootMaps += VegX-VegBIEN.plots.csv
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vegxMaps += VegX-VegBIEN.plots.csv
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ch_root_maps: $(chRootMaps) ;
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ch_root_maps: $(vegxMaps) ;
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all += $(chRootMaps) |
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all += $(vegxMaps) |
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Also available in: Unified diff
mappings/Makefile: Renamed joinMaps to dwcMaps and chrootMaps to vegxMaps. Added commented-out code to create VegX.self.organisms.csv (not ready to check in yet because it affects many dependent maps).