Revision 3641
Added by Aaron Marcuse-Kubitza over 12 years ago
| import.specimens.out.ref | ||
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Put template: |
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<VegBIEN> |
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<_ignore><inLabel>QMOR</inLabel></_ignore> |
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<specimenreplicate id="-1"> |
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<datasource_id> |
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<party> |
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<organizationname> |
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<_alt> |
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<2>QMOR</2> |
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<1>$institutionID</1> |
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</_alt> |
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</organizationname> |
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</party> |
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</datasource_id> |
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<locationevent_id> |
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<locationevent> |
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<location_id> |
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<location> |
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<datasource_id> |
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<party> |
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<organizationname> |
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<_alt> |
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<2>QMOR</2> |
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<1>$institutionID</1> |
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</_alt> |
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</organizationname> |
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</party> |
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</datasource_id> |
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<locationdetermination> |
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<coordsaccuracy><_noCV><value><_alt><1>$coordinateUncertaintyInMeters</1></_alt></value></_noCV></coordsaccuracy> |
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<footprintgeometry_dwc>$footprintWKT</footprintgeometry_dwc> |
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<namedplace_id> |
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<_simplifyPath> |
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<next>parent_id/namedplace</next> |
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<require>placename</require> |
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<path> |
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<namedplace> |
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<rank>county</rank> |
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<placename>$county</placename> |
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<parent_id> |
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<namedplace> |
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<rank>stateProvince</rank> |
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<placename>$stateProvince</placename> |
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<parent_id> |
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<namedplace> |
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<rank>country</rank> |
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<placename>$country</placename> |
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<parent_id> |
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<namedplace> |
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<rank>continent</rank> |
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<placename>$continent</placename> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</parent_id> |
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</namedplace> |
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</path> |
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</_simplifyPath> |
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</namedplace_id> |
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<latitude> |
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<_alt> |
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<1> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value> |
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<_alt> |
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<0>$decimalLatitude</0> |
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<1>$verbatimLatitude</1> |
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</_alt> |
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</value> |
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</_nullIf> |
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</1> |
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</_alt> |
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</latitude> |
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<longitude> |
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<_alt> |
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<1> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value> |
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<_alt> |
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<0>$decimalLongitude</0> |
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<1>$verbatimLongitude</1> |
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</_alt> |
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</value> |
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</_nullIf> |
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</1> |
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</_alt> |
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</longitude> |
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</locationdetermination> |
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<locationnarrative> |
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<_merge> |
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<1>$locality</1> |
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<3> |
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<_label> |
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<label>habitat</label> |
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<value>$habitat</value> |
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</_label> |
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</3> |
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</_merge> |
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</locationnarrative> |
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<elevation> |
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<_alt> |
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<2> |
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<_avg> |
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<min> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value> |
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<_rangeStart> |
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<value> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$minimumElevationInMeters</value> |
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</_replace> |
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</value> |
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</_rangeStart> |
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</value> |
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</_units> |
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</min> |
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<max> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value>$maximumElevationInMeters</value> |
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</_units> |
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</max> |
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</_avg> |
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</2> |
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</_alt> |
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</elevation> |
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<elevationrange> |
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<_range> |
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<from> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value> |
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<_rangeStart> |
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<value> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$minimumElevationInMeters</value> |
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</_replace> |
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</value> |
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</_rangeStart> |
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</value> |
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</_units> |
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</from> |
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<to> |
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<_units> |
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<default>m</default> |
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<to>m</to> |
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<to></to> |
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<value> |
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<_alt> |
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<2> |
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<_rangeEnd> |
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<value> |
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<_replace> |
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<\bca\.?></\bca\.?> |
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<value>$minimumElevationInMeters</value> |
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</_replace> |
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</value> |
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</_rangeEnd> |
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</2> |
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<1>$maximumElevationInMeters</1> |
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</_alt> |
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</value> |
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</_units> |
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</to> |
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</_range> |
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</elevationrange> |
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<centerlatitude> |
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<_alt> |
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<1> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value> |
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<_alt> |
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<0>$decimalLatitude</0> |
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<1>$verbatimLatitude</1> |
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</_alt> |
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</value> |
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</_nullIf> |
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</1> |
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</_alt> |
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</centerlatitude> |
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<centerlongitude> |
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<_alt> |
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<1> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value> |
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<_alt> |
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<0>$decimalLongitude</0> |
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<1>$verbatimLongitude</1> |
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</_alt> |
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</value> |
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</_nullIf> |
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</1> |
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</_alt> |
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</centerlongitude> |
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<sourceaccessioncode> |
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<_alt> |
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<2> |
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<_merge> |
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<3>$catalogNumber</3> |
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<2>$collectionCode</2> |
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<1>$institutionCode</1> |
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</_merge> |
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</2> |
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<1>$id</1> |
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</_alt> |
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</sourceaccessioncode> |
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</location> |
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</location_id> |
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<obsstartdate><_date><date><_dateRangeStart><value><_alt><2>$eventDate</2></_alt></value></_dateRangeStart></date></_date></obsstartdate> |
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<obsenddate><_date><date><_dateRangeEnd><value><_alt><2>$eventDate</2></_alt></value></_dateRangeEnd></date></_date></obsenddate> |
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</locationevent> |
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</locationevent_id> |
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<collectionnumber><_alt><2>$collectionID</2></_alt></collectionnumber> |
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<definedvalue fkey="tablerecord_id"> |
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<userdefined_id> |
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<userdefined> |
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<tablename>specimenreplicate</tablename> |
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<userdefinedname>sex</userdefinedname> |
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</userdefined> |
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</userdefined_id> |
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<definedvalue>$sex</definedvalue> |
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</definedvalue> |
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<taxondetermination> |
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<role>identifier</role> |
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<determinationdate><_date><date><_dateRangeStart><value><_alt><2>$dateIdentified</2></_alt></value></_dateRangeStart></date></_date></determinationdate> |
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<iscurrent>true</iscurrent> |
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<party_id> |
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<party> |
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<givenname><_namePart><first>$identifiedBy</first></_namePart></givenname> |
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<middlename><_namePart><middle>$identifiedBy</middle></_namePart></middlename> |
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<surname><_namePart><last>$identifiedBy</last></_namePart></surname> |
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</party> |
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</party_id> |
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<isoriginal>true</isoriginal> |
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<plantconcept_id> |
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<plantconcept> |
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<plantname_id> |
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<_simplifyPath> |
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<next>parent_id/plantname</next> |
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<require>plantname</require> |
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<path> |
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<plantname> |
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<rank>binomial</rank> |
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<plantname>$scientificName</plantname> |
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<parent_id> |
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<plantname> |
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<rank>authority</rank> |
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<plantname>$scientificNameAuthorship</plantname> |
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<parent_id> |
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<plantname> |
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<rank>subspecies</rank> |
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<plantname>$infraspecificEpithet</plantname> |
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<parent_id> |
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<plantname> |
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<rank>species</rank> |
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<plantname>$specificEpithet</plantname> |
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<parent_id> |
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<plantname> |
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<rank>genus</rank> |
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<plantname>$genus</plantname> |
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<parent_id> |
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<plantname> |
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<rank>family</rank> |
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<plantname>$family</plantname> |
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<parent_id> |
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<plantname> |
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<rank>order</rank> |
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<plantname>$order</plantname> |
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<parent_id> |
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<plantname> |
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<rank>class</rank> |
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<plantname>$class</plantname> |
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<parent_id> |
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<plantname> |
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<rank>subkingdom</rank> |
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<plantname>$phylum</plantname> |
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<parent_id> |
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<plantname> |
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<rank>kingdom</rank> |
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<plantname>$kingdom</plantname> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</parent_id> |
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</plantname> |
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</path> |
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</_simplifyPath> |
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</plantname_id> |
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</plantconcept> |
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</plantconcept_id> |
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</taxondetermination> |
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<verbatimcollectorname>$recordedBy</verbatimcollectorname> |
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<catalognumber_dwc>$catalogNumber</catalognumber_dwc> |
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<collectioncode_dwc>$collectionCode</collectioncode_dwc> |
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<institution_id><party><organizationname>$institutionCode</organizationname></party></institution_id> |
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<sourceaccessioncode>$id</sourceaccessioncode> |
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</specimenreplicate> |
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</VegBIEN> |
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Inserted 28 new rows into database |
Also available in: Unified diff
bin/map: out_is_db: Output the put template to stdout so it will be validated in the automated testing