Revision 3678
Added by Aaron Marcuse-Kubitza over 12 years ago
| VegX.self.organisms.csv | ||
|---|---|---|
| 21 | 21 |
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=fam])/tcs:Name" |
| 22 | 22 |
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=gen])/tcs:Name" |
| 23 | 23 |
"/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name","/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[tcs:Rank/@code=sp])/tcs:Name" |
| 24 |
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName,/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName |
|
| 25 |
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/voucher,/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/voucher |
|
| 24 |
/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/voucher,/*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/voucher |
|
| 26 | 25 |
/*ID->/*s/individualOrganism/identificationLabel[@id=1],/*ID->/*s/individualOrganism/identificationLabel[@id=1] |
| 27 | 26 |
/*ID->/*s/individualOrganism/identificationLabel[@id=2],/*ID->/*s/individualOrganism/identificationLabel[@id=2] |
| 28 | 27 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium |
| ... | ... | |
| 44 | 43 |
/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value,/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/simpleUserdefined[name=texture]/value |
| 45 | 44 |
/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/commonName,/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/commonName |
| 46 | 45 |
/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/name,/*ID->/*s/plotObservation->/*s/communityDetermination[*ID]/*s/communityConcept/name |
| 47 |
/*ID->/*s/plotObservation/*ID->/*s/project/personnel[role=metadataProvider]/organizationName,/*ID->/*s/plotObservation/*ID->/*s/project/personnel[role=metadataProvider]/organizationName |
|
| 48 |
/*ID->/*s/plotObservation/*ID->/*s/project:[personnel[role=metadataProvider]/organizationName=$/_ignore/inLabel]/title,/*ID->/*s/plotObservation/*ID->/*s/project:[personnel[role=metadataProvider]/organizationName=$/_ignore/inLabel]/title |
|
| 46 |
/*ID->/*s/plotObservation/*ID->/*s/project/title,/*ID->/*s/plotObservation/*ID->/*s/project/title |
|
| 49 | 47 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/area,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/area |
| 50 | 48 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/CoordinateUncertaintyInMeters |
| 51 | 49 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/DecimalLatitude |
| ... | ... | |
| 61 | 59 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=country]/placeName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=country]/placeName |
| 62 | 60 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=county]/placeName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=county]/placeName |
| 63 | 61 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=state]/placeName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/location[placeType=state]/placeName |
| 62 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName |
|
| 63 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier |
|
| 64 | 64 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeAspect,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeAspect |
| 65 | 65 |
/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeGradient,/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/slopeGradient |
| 66 | 66 |
/*ID->/*s/plotObservation/obsEndDate,/*ID->/*s/plotObservation/obsEndDate |
| 67 | 67 |
/*ID->/*s/plotObservation/obsStartDate,/*ID->/*s/plotObservation/obsStartDate |
| 68 |
/*ID->/*s/plotObservation/partyWithRole/*ID->/parties/party/organizationName,/*ID->/*s/plotObservation/partyWithRole/*ID->/parties/party/organizationName |
|
| 69 | 68 |
/*ID->/*s/plotObservation/simpleUserdefined[name=method]/*ID/method/name,/*ID->/*s/plotObservation/simpleUserdefined[name=method]/*ID/method/name |
| 70 | 69 |
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName,/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotName |
| 71 |
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/partyWithRole/*ID->/parties/party/organizationName,/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/partyWithRole/*ID->/parties/party/organizationName |
|
| 72 |
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier |
|
| 70 |
/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*ID->/*s/plotObservation/simpleUserdefined[name=parent]/value->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier |
|
| 73 | 71 |
/*ID->/*s/plotObservation/simpleUserdefined[name=precipitation]/value,/*ID->/*s/plotObservation/simpleUserdefined[name=precipitation]/value |
| 74 | 72 |
/*ID->/*s/plotObservation/temperature,/*ID->/*s/plotObservation/temperature |
| 75 |
/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotName,/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotName |
|
| 76 |
/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*ID->/*s/plotObservation:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier |
|
| 77 | 73 |
/height,/height |
| 78 | 74 |
/relativePlotPosition/relativeX,/relativePlotPosition/relativeX |
| 79 | 75 |
/relativePlotPosition/relativeY,/relativePlotPosition/relativeY |
| ... | ... | |
| 82 | 78 |
/simpleUserdefined[name=collectionDate]/value,/simpleUserdefined[name=collectionDate]/value |
| 83 | 79 |
/simpleUserdefined[name=growthForm]/value,/simpleUserdefined[name=growthForm]/value |
| 84 | 80 |
/simpleUserdefined[name=height]/value,/simpleUserdefined[name=height]/value |
| 81 |
/simpleUserdefined[name=sourceAccessionCode]/value,/simpleUserdefined[name=sourceAccessionCode]/value |
|
| 85 | 82 |
/volumeCanopy/*ID->/*s/attribute/ordinal/coverPercent,/volumeCanopy/*ID->/*s/attribute/ordinal/coverPercent |
| 86 | 83 |
/volumeCanopy/value,/volumeCanopy/value |
| 87 |
:[*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/simpleUserdefined[name=sourceAccessionCode]/value,:[*ID->/*s/individualOrganism/*ID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/simpleUserdefined[name=sourceAccessionCode]/value |
|
Also available in: Unified diff
mappings/DwC2-VegBIEN.specimens.csv, VegX-VegBIEN.stems.csv: Removed all manual mappings to datasource_id now that datasource_id is auto-populated, both on the VegBIEN output side and the DwC/VegX input side. This should greatly simplify many of the mappings!