Revision 3869
Added by Aaron Marcuse-Kubitza over 12 years ago
| VegCSV-VegBIEN.specimens.csv | ||
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| 73 | 73 |
collectedDate,/location/locationevent/taxonoccurrence/_if:[name=specimenreplicate_via]/then/aggregateoccurrence:[@merge=1]/plantobservation:[@merge=1]/specimenreplicate/collectiondate,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=bien2_staging&table=nybg_raw&target=tbl_structure.php#CollectedDate,29 |
| 74 | 74 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,,http://rs.tdwg.org/dwc/terms/#individualCount,25 |
| 75 | 75 |
//ordinal/coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,,, |
| 76 |
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#census_no,4
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censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.census_no,4
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| 77 | 77 |
//*s/individualOrganismObservation/volumeCanopy/value,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,,, |
| 78 | 78 |
authorPlantCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,"""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#authorObsCode, http://vegbiendev.nceas.ucsb.edu/phppgadmin/tblproperties.php?subject=table&table=plantobservation&server=localhost%3A5432%3Aallow&database=vegbien&schema=public#authorplantcode",4
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| 79 | 79 |
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/overallheight,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4 |
| 80 | 80 |
individualOrganismObservation.uniqueID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,"Field name shortened for standardization; ""{"" sorts it with other _if:[name=specimenreplicate_via]s","http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/plotUniqueIdentifier",
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| 81 | 81 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,,http://rs.tdwg.org/dwc/terms/#individualCount,25 |
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basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#basal_diam,5
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canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#canopy_form,57
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canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#canopy_position,56
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basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.basal_diam,5
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canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_form,57
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canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_canopy_position,56
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| 85 | 85 |
diameterBreastHeight.gentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#gentry_dbh,7 |
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lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#liana_infestation,58
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lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_liana_infestation,58
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| 87 | 87 |
fieldNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",,http://rs.tdwg.org/dwc/terms/#fieldNotes,54 |
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diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,Expanded for clarity,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=stems&target=tbl_structure.php#stem_dbh,6
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diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,Expanded for clarity,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.stem_dbh,6
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| 89 | 89 |
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/height,4 |
| 90 |
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,,http://nimoy.nceas.ucsb.edu/phpmyadmin/index.php?db=salvias_plots&table=plotObservations&target=tbl_structure.php#ht_first_branch_m,43
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heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.ht_first_branch_m,43
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| 91 | 91 |
//individualOrganism/identificationLabel[@id=1],"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2,, |
| 92 | 92 |
//individualOrganism/identificationLabel[@id=2],/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,,, |
| 93 | 93 |
relativePlotX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,Table name added for clarity,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/individualOrganismObservations/individualOrganismObservation/relativePlotPosition/relativeX,801 |
Also available in: Unified diff
mappings/VegX-VegCSV.stems.csv: Source SALVIAS terms from the SALVIAS data dictionary when possible, to provide an automatic link to the description of the term. Having these direct links will also assist in creating a data dictionary for VegCSV and eventually VegBIEN (using mappings/VegCSV-VegBIEN.specimens.csv). Note that many SALVIAS terms exist only in the live database, as they are not part of the export format documented in the data dictionary.