Revision 3907
Added by Aaron Marcuse-Kubitza over 12 years ago
| VegBIEN.specimens.csv | ||
|---|---|---|
| 17 | 17 |
DayCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/DayCollected; http://rs.tdwg.org/dwc/terms/#eventDate,11; 44 |
| 18 | 18 |
MonthCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/MonthCollected; http://rs.tdwg.org/dwc/terms/#eventDate,10; 44 |
| 19 | 19 |
YearCollected,"/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/YearCollected; http://rs.tdwg.org/dwc/terms/#eventDate,9; 44 |
| 20 |
CatalogNumber,/location/locationevent/specimenreplicate/catalognumber_dwc,,http://rs.tdwg.org/dwc/terms/#catalogNumber,20 |
|
| 21 |
CollectionCode,/location/locationevent/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12 |
|
| 22 |
CollectorNumber,/location/locationevent/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22 |
|
| 23 |
FieldNumber,/location/locationevent/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53 |
|
| 24 |
Sex,"/location/locationevent/specimenreplicate/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26 |
|
| 25 |
Notes,/location/locationevent/specimenreplicate/description/_merge/1,,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Notes; http://rs.tdwg.org/dwc/terms/#fieldNotes,47; 54 |
|
| 26 |
InstitutionCode,/location/locationevent/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11 |
|
| 27 |
DayIdentified,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/DayIdentified; http://rs.tdwg.org/dwc/terms/#dateIdentified,55; 120
|
|
| 28 |
MonthIdentified,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/MonthIdentified; http://rs.tdwg.org/dwc/terms/#dateIdentified,54; 120
|
|
| 29 |
YearIdentified,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/YearIdentified; http://rs.tdwg.org/dwc/terms/#dateIdentified,53; 120
|
|
| 30 |
IdentifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
|
|
| 31 |
IdentifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
|
|
| 32 |
IdentifiedBy,/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
|
|
| 33 |
ScientificName,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",,http://rs.tdwg.org/dwc/terms/#scientificName,134
|
|
| 34 |
ScientificNameAuthor,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/ScientificNameAuthor; http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship,50; 153
|
|
| 35 |
Subspecies,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/Subspecies; http://rs.tdwg.org/dwc/terms/#infraspecificEpithet,49; 150
|
|
| 36 |
Species,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Species; http://rs.tdwg.org/dwc/terms/#specificEpithet,12; 149
|
|
| 37 |
Genus,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,http://rs.tdwg.org/dwc/terms/#genus,147
|
|
| 38 |
Family,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,http://rs.tdwg.org/dwc/terms/#family,146
|
|
| 39 |
Order,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,http://rs.tdwg.org/dwc/terms/#order,145
|
|
| 40 |
Class,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,http://rs.tdwg.org/dwc/terms/#class,144
|
|
| 41 |
Phylum,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,http://rs.tdwg.org/dwc/terms/#phylum,143
|
|
| 42 |
Kingdom,"/location/locationevent/specimenreplicate/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,http://rs.tdwg.org/dwc/terms/#kingdom,142
|
|
| 43 |
Collector,/location/locationevent/specimenreplicate/verbatimcollectorname,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/Collector; http://rs.tdwg.org/dwc/terms/#recordedBy,6; 23
|
|
| 20 |
CatalogNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc,,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
|
|
| 21 |
CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,http://rs.tdwg.org/dwc/terms/#collectionCode,12
|
|
| 22 |
CollectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1/_alt/1,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/CollectorNumber; http://rs.tdwg.org/dwc/terms/#recordNumber,7; 22
|
|
| 23 |
FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/3,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
|
|
| 24 |
Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",http://rs.tdwg.org/dwc/terms/#sex,26
|
|
| 25 |
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/description/_merge/1,,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Notes; http://rs.tdwg.org/dwc/terms/#fieldNotes,47; 54
|
|
| 26 |
InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
|
|
| 27 |
Collector,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/verbatimcollectorname,,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/Collector; http://rs.tdwg.org/dwc/terms/#recordedBy,6; 23
|
|
| 28 |
DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/DayIdentified; http://rs.tdwg.org/dwc/terms/#dateIdentified,55; 120
|
|
| 29 |
MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/MonthIdentified; http://rs.tdwg.org/dwc/terms/#dateIdentified,54; 120
|
|
| 30 |
YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/YearIdentified; http://rs.tdwg.org/dwc/terms/#dateIdentified,53; 120
|
|
| 31 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/givenname/_namePart/first,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
|
|
| 32 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/middlename/_namePart/middle,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
|
|
| 33 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[iscurrent=true]/*_id/party/surname/_namePart/last,,http://rs.tdwg.org/dwc/terms/#identifiedBy,119
|
|
| 34 |
ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",,http://rs.tdwg.org/dwc/terms/#scientificName,134
|
|
| 35 |
ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/ScientificNameAuthor; http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship,50; 153
|
|
| 36 |
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",,http://digir.net/schema/conceptual/darwin/manis/1.21/darwin2.xsd#/Subspecies; http://rs.tdwg.org/dwc/terms/#infraspecificEpithet,49; 150
|
|
| 37 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/Species; http://rs.tdwg.org/dwc/terms/#specificEpithet,12; 149
|
|
| 38 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",,http://rs.tdwg.org/dwc/terms/#genus,147
|
|
| 39 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",,http://rs.tdwg.org/dwc/terms/#family,146
|
|
| 40 |
Order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",,http://rs.tdwg.org/dwc/terms/#order,145
|
|
| 41 |
Class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",,http://rs.tdwg.org/dwc/terms/#class,144
|
|
| 42 |
Phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",,http://rs.tdwg.org/dwc/terms/#phylum,143
|
|
| 43 |
Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true,iscurrent=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",,http://rs.tdwg.org/dwc/terms/#kingdom,142
|
|
| 44 | 44 |
MaximumDepth,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value",,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/MaximumDepth; http://rs.tdwg.org/dwc/terms/#maximumDepthInMeters,40; 75 |
| 45 | 45 |
MinimumDepth,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value",,http://digir.net/schema/conceptual/darwin/2003/1.0/darwin2.xsd#/MinimumDepth; http://rs.tdwg.org/dwc/terms/#minimumDepthInMeters,39; 74 |
| 46 | 46 |
Locality,/location/locationnarrative/_merge/1,,http://rs.tdwg.org/dwc/terms/#locality,68 |
Also available in: Unified diff
mappings/DwC2-VegBIEN.specimens.csv: Mapped specimenreplicate via plantobservation for consistency with plots data. (This change is required for VegCSV table merging to work properly.) This is also a more accurate way of representing the data, because a specimen in fact comes from a plant, and it's natural to place the plant-related data (measurements, etc.) in the plantobservation table.