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1 3970 aaronmk
DwC,VegBIEN:,Comments
2 4003 aaronmk
institutionCode,/location/authorlocationcode/_merge/1,
3
collectionCode,/location/authorlocationcode/_merge/2,
4
catalogNumber,/location/authorlocationcode/_merge/3,
5 3996 aaronmk
verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
6 3984 aaronmk
maximumElevation,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
7
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
8 3970 aaronmk
minimumElevation,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
9 3969 aaronmk
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
10 3970 aaronmk
minimumElevation,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
11 3969 aaronmk
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
12 3984 aaronmk
maximumElevation,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
13
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
14 3970 aaronmk
minimumElevation,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
15 3969 aaronmk
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
16
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
17
coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
18 3970 aaronmk
boundingBox,/location/locationdetermination/footprintgeometry_dwc,
19 3969 aaronmk
footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
20
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
21 3970 aaronmk
latitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
22 3969 aaronmk
verbatimLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
23
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
24 3970 aaronmk
longitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
25 3969 aaronmk
verbatimLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
26
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
27 3970 aaronmk
state,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
28 3969 aaronmk
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
29
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
30
continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
31 3970 aaronmk
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
32 3996 aaronmk
samplingProtocol,/location/locationevent/*_id/method/name,
33 3973 aaronmk
fieldNumber,/location/locationevent/authoreventcode,
34 3970 aaronmk
eventDate/_alt,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom eventDate mappings that don't pass through the default eventDate mapping
35
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
36
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
37
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
38
eventDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/2,
39
collectedDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date/_dateRangeStart/value/_alt/3,
40 3982 aaronmk
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
41 3969 aaronmk
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
42 3970 aaronmk
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
43 3969 aaronmk
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
44
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/_if[@name=""if indirect voucher""]/else/catalognumber_dwc",
45
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
46
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,
47 3973 aaronmk
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/1,
48
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_alt/2,
49 3969 aaronmk
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
50 3970 aaronmk
globalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
51
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
52 3969 aaronmk
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
53
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
54
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
55 3980 aaronmk
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
56
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
57
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
58
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
59
scientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
60
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
61
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
62
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
63
species,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
64
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
65
genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
66
family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
67
order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
68
class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
69
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
70
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
71
dateIdentified/_alt,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt,Allow datasource to define custom dateIdentified mappings that don't pass through the default dateIdentified mapping
72
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/day/_nullIf:[null=0,type=float]/value",
73
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/month/_nullIf:[null=0,type=float]/value",
74
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/1/_date/year/_nullIf:[null=0,type=float]/value",
75
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/2,
76
identifiedDate,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value/_alt/3,
77
remarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
78
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
79
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
80 3970 aaronmk
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
81 3969 aaronmk
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
82 3984 aaronmk
maximumDepth,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
83
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
84
minimumDepth,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
85
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
86 3969 aaronmk
locality,/location/locationnarrative/_merge/1,
87
verbatimLocality,/location/locationnarrative/_merge/2,
88
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
89 4003 aaronmk
globalUniqueIdentifier,/location/sourceaccessioncode,
90
id,/location/sourceaccessioncode,
91 4000 aaronmk
locationID,/location/sourceaccessioncode,
92 4003 aaronmk
occurrenceID,/location/sourceaccessioncode,
93 3969 aaronmk
acceptedNameUsage,,
94
acceptedNameUsageID,,
95 3970 aaronmk
accessRights,,** No non-empty join mapping for dcterms:accessRights **
96 3969 aaronmk
associatedMedia,,
97
associatedOccurrences,,
98
associatedReferences,,
99
associatedSequences,,
100
associatedTaxa,,
101
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
102
bed,,
103
behavior,,
104 3970 aaronmk
bibliographicCitation,,** No non-empty join mapping for dcterms:bibliographicCitation **
105 3969 aaronmk
countryCode,,
106
dataGeneralizations,,
107
datasetID,,
108
datasetName,,
109 3970 aaronmk
dateLastModified,,** No non-empty join mapping for dcterms:modified **
110 3969 aaronmk
day,,Brad: OMIT
111
dcterms:accessRights,,
112
dcterms:bibliographicCitation,,
113
dcterms:language,,
114
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
115
dcterms:references,,
116
dcterms:rights,,
117
dcterms:rightsHolder,,
118
dcterms:type,,
119
disposition,,
120
dynamicProperties,,
121
earliestAgeOrLowestStage,,
122
earliestEonOrLowestEonothem,,
123
earliestEpochOrLowestSeries,,
124
earliestEraOrLowestErathem,,
125
earliestPeriodOrLowestSystem,,
126
endDayOfYear,,
127
eventID,,
128
eventRemarks,,
129
eventTime,,Brad: OMIT
130
footprintSRS,,
131
footprintSpatialFit,,
132
formation,,
133
geodeticDatum,,
134
geologicalContextID,,
135
georeferenceProtocol,,
136
georeferenceRemarks,,
137
georeferenceSources,,
138
georeferenceVerificationStatus,,
139
georeferencedBy,,
140
georeferencedDate,,
141
group,,
142
higherClassification,,
143
higherGeography,,
144
higherGeographyID,,
145
highestBiostratigraphicZone,,
146
identificationID,,
147
identificationReferences,,
148
identificationRemarks,,
149
identificationVerificationStatus,,
150
individualID,,
151
informationWithheld,,
152
institutionID,,
153
island,,
154
islandGroup,,
155 3970 aaronmk
julianDay,,** No non-empty join mapping for day **
156
language,,** No non-empty join mapping for dcterms:language **
157 3969 aaronmk
latestAgeOrHighestStage,,
158
latestEonOrHighestEonothem,,
159
latestEpochOrHighestSeries,,
160
latestEraOrHighestErathem,,
161
latestPeriodOrHighestSystem,,
162
lifeStage,,
163
lithostratigraphicTerms,,
164
locationAccordingTo,,
165
locationRemarks,,
166
lowestBiostratigraphicZone,,
167
maximumDistanceAboveSurfaceInMeters,,
168
measurementAccuracy,,
169
measurementDeterminedBy,,
170
measurementDeterminedDate,,
171
measurementID,,
172
measurementMethod,,
173
measurementRemarks,,
174
measurementType,,
175
measurementUnit,,
176
measurementValue,,
177
member,,
178
minimumDistanceAboveSurfaceInMeters,,
179 3970 aaronmk
modified,,** No non-empty join mapping for dcterms:modified **
180 3969 aaronmk
month,,
181
municipality,,
182
nameAccordingTo,,
183
nameAccordingToID,,
184
namePublishedIn,,
185
namePublishedInID,,
186
namePublishedInYear,,
187
nomenclaturalCode,,
188
nomenclaturalStatus,,
189
occurrenceRemarks,,
190
occurrenceStatus,,
191
originalNameUsage,,
192
originalNameUsageID,,
193
otherCatalogNumbers,,
194
ownerInstitutionCode,,
195
parentNameUsage,,
196
parentNameUsageID,,
197
pointRadiusSpatialFit,,
198 3970 aaronmk
preparation,,** No non-empty join mapping for preparations **
199
preparationType,,** No non-empty join mapping for preparations **
200 3969 aaronmk
preparations,,Brad: OMIT
201 3970 aaronmk
previousCatalogNumber,,** No non-empty join mapping for otherCatalogNumbers ** According to <http://rs.tdwg.org/dwc/terms/history/index.htm#PreviousCatalogNumber-2003-06-13>
202 3969 aaronmk
previousIdentifications,,Brad: OMIT
203 3970 aaronmk
references,,** No non-empty join mapping for dcterms:references **
204
relatedCatalogItem,,** No non-empty join mapping for relatedResourceID **
205 3969 aaronmk
relatedResourceID,,Brad: OMIT
206
relationshipAccordingTo,,
207
relationshipEstablishedDate,,
208
relationshipOfResource,,Brad: OMIT
209
relationshipRemarks,,
210 3970 aaronmk
relationshipType,,** No non-empty join mapping for relationshipOfResource **
211 3969 aaronmk
reproductiveCondition,,
212
resourceID,,
213
resourceRelationshipID,,
214 3970 aaronmk
rights,,** No non-empty join mapping for dcterms:rights **
215
rightsHolder,,** No non-empty join mapping for dcterms:rightsHolder **
216 3969 aaronmk
samplingEffort,,
217
scientificNameID,,
218
startDayOfYear,,
219
subgenus,,
220
taxonConceptID,,
221
taxonID,,
222
taxonRank,,
223
taxonomicStatus,,
224 3970 aaronmk
timeOfDay,,** No non-empty join mapping for eventTime **
225
type,,** No non-empty join mapping for dcterms:type **
226 3969 aaronmk
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
227
verbatimCoordinateSystem,,
228
verbatimCoordinates,,
229
verbatimDepth,,
230
verbatimEventDate,,
231
verbatimSRS,,
232
verbatimTaxonRank,,
233
vernacularName,,
234
waterBody,,
235
year,,