1
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DwC,VegBIEN:,Comments
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2
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institutionCode,/location/authorlocationcode/_merge/1,
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3
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collectionCode,/location/authorlocationcode/_merge/2,
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4
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catalogNumber,"/location/authorlocationcode/_merge/3/_if[@name=""if indirect voucher""]/else",
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5
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verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
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6
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maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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7
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minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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8
|
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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9
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maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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10
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minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
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11
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coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
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12
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coordinatePrecision,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/2,
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13
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footprintWKT,/location/locationdetermination/footprintgeometry_dwc,
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14
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decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
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15
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verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
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16
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decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
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17
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verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
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18
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county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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19
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stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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20
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country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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21
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continent,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=""parent_id/namedplace"",require=placename]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
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22
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samplingProtocol,/location/locationevent/*_id/method/name,
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23
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fieldNumber,/location/locationevent/authoreventcode,
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24
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eventDate,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/1,
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25
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dateCollected,/location/locationevent/obsenddate/_*/date/_dateRangeEnd/value/_alt/2,
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26
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eventDate,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/1,
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27
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dateCollected,/location/locationevent/obsstartdate/_*/date/_dateRangeStart/value/_alt/2,
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28
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dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_*/date,
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29
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individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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30
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fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
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31
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode,
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32
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sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
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33
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
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34
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catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
|
35
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collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
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36
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collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_merge/2,
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37
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber,
|
38
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institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
|
39
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
|
40
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establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_map:[cultivated=t,wild=f,*=]/value",
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41
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establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
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42
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occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/1,
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43
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catalogNumber,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/2/_if[@name=""if indirect voucher""]/else",
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44
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recordNumber,/location/locationevent/taxonoccurrence/sourceaccessioncode/_alt/3,
|
45
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/givenname/_namePart/first,
|
46
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/middlename/_namePart/middle,
|
47
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/party/surname/_namePart/last,
|
48
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scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname",
|
49
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scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=authority]/plantname",
|
50
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infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname",
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51
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specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
|
52
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genus,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
|
53
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family,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
|
54
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order,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
|
55
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class,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
|
56
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phylum,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
|
57
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kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/*_id/plantconcept/plantname_id/_simplifyPath:[next=""parent_id/plantname"",require=plantname]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
|
58
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dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/determinationdate/_*/date/_dateRangeStart/value,
|
59
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taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/notes,
|
60
|
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[role=identifier]:[isoriginal=true]/taxonfit,
|
61
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recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
|
62
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maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
63
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minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
64
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locality,/location/locationnarrative/_merge/1,
|
65
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verbatimLocality,/location/locationnarrative/_merge/2,
|
66
|
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
|
67
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occurrenceID,/location/sourceaccessioncode/_alt/1,
|
68
|
locationID,/location/sourceaccessioncode/_alt/2,
|
69
|
acceptedNameUsage,,
|
70
|
acceptedNameUsageID,,
|
71
|
associatedMedia,,
|
72
|
associatedOccurrences,,
|
73
|
associatedReferences,,
|
74
|
associatedSequences,,
|
75
|
associatedTaxa,,
|
76
|
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
|
77
|
bed,,
|
78
|
behavior,,
|
79
|
countryCode,,
|
80
|
dataGeneralizations,,
|
81
|
datasetID,,
|
82
|
datasetName,,
|
83
|
day,,Brad: OMIT
|
84
|
dcterms:accessRights,,
|
85
|
dcterms:bibliographicCitation,,
|
86
|
dcterms:language,,
|
87
|
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
|
88
|
dcterms:references,,
|
89
|
dcterms:rights,,
|
90
|
dcterms:rightsHolder,,
|
91
|
dcterms:type,,
|
92
|
disposition,,
|
93
|
dynamicProperties,,
|
94
|
earliestAgeOrLowestStage,,
|
95
|
earliestEonOrLowestEonothem,,
|
96
|
earliestEpochOrLowestSeries,,
|
97
|
earliestEraOrLowestErathem,,
|
98
|
earliestPeriodOrLowestSystem,,
|
99
|
endDayOfYear,,
|
100
|
eventID,,
|
101
|
eventRemarks,,
|
102
|
eventTime,,Brad: OMIT
|
103
|
footprintSRS,,
|
104
|
footprintSpatialFit,,
|
105
|
formation,,
|
106
|
geodeticDatum,,
|
107
|
geologicalContextID,,
|
108
|
georeferenceProtocol,,
|
109
|
georeferenceRemarks,,
|
110
|
georeferenceSources,,
|
111
|
georeferenceVerificationStatus,,
|
112
|
georeferencedBy,,
|
113
|
georeferencedDate,,
|
114
|
group,,
|
115
|
higherClassification,,
|
116
|
higherGeography,,
|
117
|
higherGeographyID,,
|
118
|
highestBiostratigraphicZone,,
|
119
|
identificationID,,
|
120
|
identificationReferences,,
|
121
|
identificationRemarks,,
|
122
|
identificationVerificationStatus,,
|
123
|
individualID,,
|
124
|
informationWithheld,,
|
125
|
institutionID,,
|
126
|
island,,
|
127
|
islandGroup,,
|
128
|
latestAgeOrHighestStage,,
|
129
|
latestEonOrHighestEonothem,,
|
130
|
latestEpochOrHighestSeries,,
|
131
|
latestEraOrHighestErathem,,
|
132
|
latestPeriodOrHighestSystem,,
|
133
|
lifeStage,,
|
134
|
lithostratigraphicTerms,,
|
135
|
locationAccordingTo,,
|
136
|
locationRemarks,,
|
137
|
lowestBiostratigraphicZone,,
|
138
|
maximumDistanceAboveSurfaceInMeters,,
|
139
|
measurementAccuracy,,
|
140
|
measurementDeterminedBy,,
|
141
|
measurementDeterminedDate,,
|
142
|
measurementID,,
|
143
|
measurementMethod,,
|
144
|
measurementRemarks,,
|
145
|
measurementType,,
|
146
|
measurementUnit,,
|
147
|
measurementValue,,
|
148
|
member,,
|
149
|
minimumDistanceAboveSurfaceInMeters,,
|
150
|
month,,
|
151
|
municipality,,
|
152
|
nameAccordingTo,,
|
153
|
nameAccordingToID,,
|
154
|
namePublishedIn,,
|
155
|
namePublishedInID,,
|
156
|
namePublishedInYear,,
|
157
|
nomenclaturalCode,,
|
158
|
nomenclaturalStatus,,
|
159
|
occurrenceRemarks,,
|
160
|
occurrenceStatus,,
|
161
|
originalNameUsage,,
|
162
|
originalNameUsageID,,
|
163
|
otherCatalogNumbers,,
|
164
|
ownerInstitutionCode,,
|
165
|
parentNameUsage,,
|
166
|
parentNameUsageID,,
|
167
|
pointRadiusSpatialFit,,
|
168
|
preparations,,Brad: OMIT
|
169
|
previousIdentifications,,Brad: OMIT
|
170
|
relatedResourceID,,Brad: OMIT
|
171
|
relationshipAccordingTo,,
|
172
|
relationshipEstablishedDate,,
|
173
|
relationshipOfResource,,Brad: OMIT
|
174
|
relationshipRemarks,,
|
175
|
reproductiveCondition,,
|
176
|
resourceID,,
|
177
|
resourceRelationshipID,,
|
178
|
samplingEffort,,
|
179
|
scientificNameID,,
|
180
|
startDayOfYear,,
|
181
|
subgenus,,
|
182
|
taxonConceptID,,
|
183
|
taxonID,,
|
184
|
taxonRank,,
|
185
|
taxonomicStatus,,
|
186
|
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
|
187
|
verbatimCoordinateSystem,,
|
188
|
verbatimCoordinates,,
|
189
|
verbatimDepth,,
|
190
|
verbatimEventDate,,
|
191
|
verbatimSRS,,
|
192
|
verbatimTaxonRank,,
|
193
|
vernacularName,,
|
194
|
waterBody,,
|
195
|
year,,
|