Revision 4195
Added by Aaron Marcuse-Kubitza over 12 years ago
| test.xml.ref | ||
|---|---|---|
| 110 | 110 |
</stemobservation> |
| 111 | 111 |
</plantobservation> |
| 112 | 112 |
</aggregateoccurrence> |
| 113 |
<authortaxoncode> |
|
| 114 |
<_alt> |
|
| 115 |
<1>$Ind</1> |
|
| 116 |
<2> |
|
| 117 |
<_name> |
|
| 118 |
<first>$OrigGenus</first> |
|
| 119 |
<last>$OrigSpecies</last> |
|
| 120 |
</_name> |
|
| 121 |
</2> |
|
| 122 |
</_alt> |
|
| 123 |
</authortaxoncode> |
|
| 113 |
<authortaxoncode>$Ind</authortaxoncode> |
|
| 124 | 114 |
<growthform> |
| 125 | 115 |
<_map> |
| 126 | 116 |
<T>tree</T> |
| ... | ... | |
| 144 | 134 |
</growthform> |
| 145 | 135 |
<sourceaccessioncode>$PlotObsID</sourceaccessioncode> |
| 146 | 136 |
<taxondetermination> |
| 147 |
<role>computer</role>
|
|
| 137 |
<isoriginal>true</isoriginal>
|
|
| 148 | 138 |
<plantconcept_id> |
| 149 | 139 |
<plantconcept> |
| 150 | 140 |
<plantname_id> |
| ... | ... | |
| 157 | 147 |
<parent_id> |
| 158 | 148 |
<plantname> |
| 159 | 149 |
<rank>authority</rank> |
| 160 |
<plantname>$auth</plantname> |
|
| 161 | 150 |
<parent_id> |
| 162 | 151 |
<plantname> |
| 163 | 152 |
<rank>subspecies</rank> |
| 164 |
<plantname> |
|
| 165 |
<_name> |
|
| 166 |
<first>$infra_rank_1</first> |
|
| 167 |
<last>$infra_ep_1</last> |
|
| 168 |
</_name> |
|
| 169 |
</plantname> |
|
| 170 | 153 |
<parent_id> |
| 171 | 154 |
<plantname> |
| 172 | 155 |
<rank>species</rank> |
| 173 |
<plantname>$Species</plantname> |
|
| 156 |
<plantname>$OrigSpecies</plantname>
|
|
| 174 | 157 |
<parent_id> |
| 175 | 158 |
<plantname> |
| 176 | 159 |
<rank>genus</rank> |
| 177 |
<plantname>$Genus</plantname> |
|
| 160 |
<plantname>$OrigGenus</plantname>
|
|
| 178 | 161 |
<parent_id> |
| 179 | 162 |
<plantname> |
| 180 | 163 |
<rank>family</rank> |
| 181 |
<plantname>$Family</plantname> |
|
| 164 |
<plantname>$OrigFamily</plantname>
|
|
| 182 | 165 |
</plantname> |
| 183 | 166 |
</parent_id> |
| 184 | 167 |
</plantname> |
| ... | ... | |
| 195 | 178 |
</plantname_id> |
| 196 | 179 |
</plantconcept> |
| 197 | 180 |
</plantconcept_id> |
| 181 |
<taxonfit>$cfaff</taxonfit> |
|
| 198 | 182 |
</taxondetermination> |
| 199 | 183 |
<taxondetermination> |
| 200 |
<role>identifier</role>
|
|
| 184 |
<role>computer</role>
|
|
| 201 | 185 |
<plantconcept_id> |
| 202 | 186 |
<plantconcept> |
| 203 | 187 |
<plantname_id> |
| ... | ... | |
| 207 | 191 |
<path> |
| 208 | 192 |
<plantname> |
| 209 | 193 |
<rank>binomial</rank> |
| 210 |
<plantname> |
|
| 211 |
<_name> |
|
| 212 |
<first>$OrigGenus</first> |
|
| 213 |
<last>$OrigSpecies</last> |
|
| 214 |
</_name> |
|
| 215 |
</plantname> |
|
| 216 | 194 |
<parent_id> |
| 217 | 195 |
<plantname> |
| 218 | 196 |
<rank>authority</rank> |
| 197 |
<plantname>$auth</plantname> |
|
| 219 | 198 |
<parent_id> |
| 220 | 199 |
<plantname> |
| 221 | 200 |
<rank>subspecies</rank> |
| 201 |
<plantname> |
|
| 202 |
<_name> |
|
| 203 |
<first>$infra_rank_1</first> |
|
| 204 |
<last>$infra_ep_1</last> |
|
| 205 |
</_name> |
|
| 206 |
</plantname> |
|
| 222 | 207 |
<parent_id> |
| 223 | 208 |
<plantname> |
| 224 | 209 |
<rank>species</rank> |
| 210 |
<plantname>$Species</plantname> |
|
| 225 | 211 |
<parent_id> |
| 226 | 212 |
<plantname> |
| 227 | 213 |
<rank>genus</rank> |
| 214 |
<plantname>$Genus</plantname> |
|
| 228 | 215 |
<parent_id> |
| 229 | 216 |
<plantname> |
| 230 | 217 |
<rank>family</rank> |
| 231 |
<plantname>$OrigFamily</plantname>
|
|
| 218 |
<plantname>$Family</plantname> |
|
| 232 | 219 |
</plantname> |
| 233 | 220 |
</parent_id> |
| 234 | 221 |
</plantname> |
| ... | ... | |
| 245 | 232 |
</plantname_id> |
| 246 | 233 |
</plantconcept> |
| 247 | 234 |
</plantconcept_id> |
| 248 |
<taxonfit>$cfaff</taxonfit> |
|
| 249 | 235 |
</taxondetermination> |
| 250 | 236 |
<verbatimcollectorname> |
| 251 | 237 |
<_name> |
| ... | ... | |
| 285 | 271 |
</parent_id> |
| 286 | 272 |
</location> |
| 287 | 273 |
</VegBIEN> |
| 288 |
Inserted 44 new rows into database |
|
| 274 |
Inserted 42 new rows into database |
|
Also available in: Unified diff
inputs/SALVIAS*/1.organisms/map.csv: Remapped OrigFamily/OrigGenus/OrigSpecies to new verbatim* taxonomic names. Also remapped cfaff to verbatimIdentificationQualifier, because it was previously mapped to the same taxondetermination as the Orig* terms, but this will later need to be remapped to identificationQualifier (not in this commit because that is a separate change). Note that the switch to the verbatim* taxonomic names removes a concatenated binomial that was part of the previous mappings, which put OrigGenus and OrigSpecies together into one scientificName.