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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4200 over 12 years Aaron Marcuse-Kubitza backups/: svn:ignore: Also ignore .*, which inc...
  bin 4696 about 12 years Aaron Marcuse-Kubitza Removed no longer used ucase_first
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 4687 about 12 years Aaron Marcuse-Kubitza input.Makefile: Existing maps discovery: Substi...
  lib 4614 about 12 years Aaron Marcuse-Kubitza lib/mappings.Makefile: missing_mappings: Displa...
  mappings 4692 about 12 years Aaron Marcuse-Kubitza mappings/Makefile: Inline $(review_) because it...
  schemas 4701 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: plantname: Added verbatimr...
  to_do 4524 about 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 about 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.91 KB 4613 about 12 years Aaron Marcuse-Kubitza root Makefile: Maps validation: Removed no long...
README.TXT 10.9 KB 4677 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: Added steps to record ...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...
new_terms.csv 8.9 KB 4615 about 12 years Aaron Marcuse-Kubitza input.Makefile: Maps validation: %/new_terms.cs...
unmapped_terms.csv 2.3 KB 4608 about 12 years Aaron Marcuse-Kubitza Generated global unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
4701 09/14/2012 08:53 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: plantname: Added verbatimrank to store ranks of custom taxonomic levels, such as rosids. Note that even if you specify a custom verbatimrank, you must also specify a closest-match rank from the taxonrank closed list. This ensures that every taxonomic name is placed in the correct relative order in the taxonomic hierarchy.
4700 09/14/2012 08:38 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: plantconcept: Made plantname_id optional because the datasource's plantconcepts do not need to be placed in the recursive plantname hierarchy
4699 09/14/2012 08:35 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: plantconcept: Added datasource_id and appropriate unique indexes to enable scoping by datasource. Moved plantcode right after datasource_id because it will be used for the sourceaccessioncode (if any).
4698 09/14/2012 08:21 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Moved plantconcept.plantdescription to plantname and renamed it to description, so that a taxon of any rank can have a description
4697 09/14/2012 08:02 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: plantconcept: Added denormalized taxonomic ranks from <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegBIEN_taxonomic_schema#Primary> and concatenated scientific name fields
4696 09/14/2012 07:25 PM Aaron Marcuse-Kubitza

Removed no longer used ucase_first
4695 09/14/2012 07:23 PM Aaron Marcuse-Kubitza

Removed no longer used bin/union
4694 09/14/2012 07:22 PM Aaron Marcuse-Kubitza

Removed no longer used join_union_sort
4693 09/14/2012 07:21 PM Aaron Marcuse-Kubitza

Removed no longer used ci_map, because all relevant mapping scripts are now case-insensitive
4692 09/14/2012 07:19 PM Aaron Marcuse-Kubitza

mappings/Makefile: Inline $(review_) because it's only used once

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