Revision 495
Added by Aaron Marcuse-Kubitza about 13 years ago
| VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 56 | 56 |
/diameterBaseDistance[baseDistance=1.37]/diameter,/aggregateoccurrence/individualplant/diameter |
| 57 | 57 |
/height,/aggregateoccurrence/individualplant/height |
| 58 | 58 |
/simpleUserdefined[name=stemHeightM]/value,/aggregateoccurrence/individualplant/height |
| 59 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/authorCode,/aggregateoccurrence/individualplant/specimen:[*_id/reference]/catalognumber_dwc |
|
| 60 |
/simpleUserdefined[name=collectionDate]/value,/aggregateoccurrence/individualplant/specimen:[*_id/reference]/collectiondate |
|
| 61 |
/simpleUserdefined[name=collectionDate]/value/_date/date,/aggregateoccurrence/individualplant/specimen:[*_id/reference]/collectiondate/_date/date |
|
| 59 | 62 |
/*ID->/*s/individualOrganism/identificationLabel,/aggregateoccurrence/individualplant/stem/authorcode |
| 60 | 63 |
/*ID->/*s/individualOrganism/identificationLabel/_alt/1,/aggregateoccurrence/individualplant/stem/authorcode/_alt/1 |
| 61 | 64 |
/*ID->/*s/individualOrganism/identificationLabel/_alt/2,/aggregateoccurrence/individualplant/stem/authorcode/_alt/2 |
| ... | ... | |
| 71 | 74 |
/simpleUserdefined[name=vegetation]/value,"/aggregateoccurrence/individualplant/stem/definedvalue[*_id/userdefined[tablename=stem,userdefinedname=vegetation]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
| 72 | 75 |
/simpleUserdefined[name=xPosition]/value,/aggregateoccurrence/individualplant/stem/xposition |
| 73 | 76 |
/simpleUserdefined[name=yPosition]/value,/aggregateoccurrence/individualplant/stem/yposition |
| 74 |
/simpleUserdefined[name=collectionDate]/value,/specimen/collectiondate |
|
| 75 |
/simpleUserdefined[name=collectionDate]/value/_date/date,/specimen/collectiondate/_date/date |
|
| 76 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/authorCode,/taxondetermination[role_id/aux_role/rolecode=collector]/collectionnumber |
|
| 77 | 77 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName","/taxondetermination[role_id/aux_role/rolecode=collector]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}"
|
| 78 | 78 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/{givenName/_namePart/{first,middle},surName/_namePart/last}","/taxondetermination[role_id/aux_role/rolecode=collector]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}"
|
| 79 | 79 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName",/taxondetermination[role_id/aux_role/rolecode=collector]/collector_id/party/{surname}
|
| ... | ... | |
| 83 | 83 |
/simpleUserdefined[name=habit]/value,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=habit]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
| 84 | 84 |
/simpleUserdefined[name=individualCode]/value,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
| 85 | 85 |
/*ID->/*s/individualOrganism/simpleUserdefined[name=sex]/value,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
| 86 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName,/taxondetermination[role_id/aux_role/rolecode=collector]/museum_id/party/organizationname |
|
| 87 | 86 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/first,/taxondetermination[role_id/aux_role/rolecode=collector]/museum_id/party/organizationname/_name/first |
| 88 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/last,/taxondetermination[role_id/aux_role/rolecode=collector]/museum_id/party/organizationname/_name/last |
|
| 89 | 87 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text,/taxondetermination[role_id/aux_role/rolecode=collector]/notes |
| 90 | 88 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/{*_id/*/plantname,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}"
|
| 91 | 89 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/{*_id/*/plantname,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}"
|
| ... | ... | |
| 105 | 103 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]/*_id/plantconcept/*_id/reference/referencecontributor/*_id/referenceparty/{givenname,surname}"
|
| 106 | 104 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/{*_id/*/plantname,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}"
|
| 107 | 105 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}"
|
| 106 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName,"/{taxondetermination[role_id/aux_role/rolecode=collector]/museum_id/party/organizationname,aggregateoccurrence/individualplant/specimen:[*_id/reference]/collectioncode_dwc/_namePart/last}"
|
|
| 107 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/last,"/{taxondetermination[role_id/aux_role/rolecode=collector]/museum_id/party/organizationname/_name/last,aggregateoccurrence/individualplant/specimen:[*_id/reference]/collectioncode_dwc}"
|
|
| 108 | 108 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonName)/Simple","/{taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/*/plantname,taxondetermination[role_id/aux_role/rolecode=collector]/*_id/*/plantname/_alt/1}"
|
| 109 | 109 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/{taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/{*_id/*/plantname,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname},taxondetermination[role_id/aux_role/rolecode=collector]/*_id/*/plantname/_alt/2}"
|
| 110 | 110 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher,":[aggregateoccurrence/count/_alt/2=1]/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=false,determinationdate=epoch,*_id/party]/museumaccessionnumber,*_id/plotevent/authorcode/_alt/2,*_id/plotevent/*_id/plot:[confidentialitystatus=0]/authorcode/_alt/3}"
|
Also available in: Unified diff
VegBIEN: Merged specimen.collectionnumber and catalognumber_dwc fields. Removed NOT NULL constraints on several specimen columns because not all specimens have all identifiers. Mapped to new specimen fields.