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Revision 5138

mappings/VegCore-VegBIEN.csv: non-TNRS taxonpaths: Store the concatenated identifyingtaxonomicname in a separate taxonpath owned by the TNRS datasource, so that it will match up with (and create a link to) the corresponding submitted TNRS name's taxonpath. This in turn is linked to the TNRS-determined accepted name, thus creating a three-level hierarchy of datasource name -> concatenated name -> accepted name.

View differences:

VegCore-VegBIEN.csv
129 129
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
130 130
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
131 131
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
132
acceptedScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/cond/_exists",
133
acceptedScientificNameWithAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/cond/_exists",
134
scientificNameWithAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/1",
135
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
136
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
137
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
138
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3",
139
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
140
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
141
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
142
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
143
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
144
forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
145
cultivar,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""cult. ""]/2",
146
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
132 147
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author,
133 148
acceptedScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/author,
134 149
acceptedClass,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/class,
......
164 179
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
165 180
forma,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/forma,
166 181
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
167
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/1,
168
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,
169
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
170
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
171
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3,
172
subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4,
173
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
174
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
175
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2,
176
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
177
forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
178
cultivar,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""cult. ""]/2",
179
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2,
180 182
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom,
181 183
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order,
182 184
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum,
......
195 197
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
196 198
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
197 199
originalScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/author,
200
originalScientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/1,
201
originalScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,
202
originalFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
203
originalGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
204
originalSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3,
205
originalSubspecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4,
206
originalInfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
207
originalTaxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
208
originalInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2,
209
originalVariety,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
210
originalForma,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
211
originalCultivar,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""cult. ""]/2",
212
originalScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/2,
198 213
originalClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
199 214
originalCultivar,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/cultivar,
200 215
originalFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
201 216
originalForma,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/forma,
202 217
originalGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
203
originalScientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/1,
204
originalScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,
205
originalFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
206
originalGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
207
originalSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3,
208
originalSubspecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4,
209
originalInfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
210
originalTaxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
211
originalInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2,
212
originalVariety,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
213
originalForma,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
214
originalCultivar,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""cult. ""]/2",
215
originalScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2,
216 218
originalKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
217 219
originalOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
218 220
originalPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,

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