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Revision 5248

inputs/.TNRS/tnrs/map.csv: Remapped Name_submitted to new verbatimScientificNameWithAuthorship to create an additional level of taxonconcept for the concatenated (TNRS input) name separate from the parsed (TNRS output) name

View differences:

test.xml.ref
61 61
                                        </taxon>
62 62
                                    </taxon_id>
63 63
                                    <identifyingtaxonomicname>
64
                                        <_alt>
65
                                            <1>$Name_submitted</1>
66
                                            <2>
67
                                                <_join_words>
68
                                                    <1>
69
                                                        <_alt>
70
                                                            <1>$Name_matched</1>
71
                                                            <2>
64
                                        <_join_words>
65
                                            <1>
66
                                                <_alt>
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                                                    <1>$Name_matched</1>
68
                                                    <2>
69
                                                        <_join_words>
70
                                                            <1>$Name_matched_accepted_family</1>
71
                                                            <2>$Genus_matched</2>
72
                                                            <3>
72 73
                                                                <_join_words>
73
                                                                    <1>$Name_matched_accepted_family</1>
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                                                                    <2>$Genus_matched</2>
75
                                                                    <3>
76
                                                                        <_join_words>
77
                                                                            <1>$Specific_epithet_matched</1>
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                                                                            <2>$Unmatched_terms</2>
79
                                                                        </_join_words>
80
                                                                    </3>
81
                                                                    <5>
82
                                                                        <_join_words>
83
                                                                            <1>
84
                                                                                <_if name="if has infraspecificEpithet">
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                                                                                    <cond>$Infraspecific_epithet_matched</cond>
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                                                                                    <then>$Name_matched_rank</then>
87
                                                                                </_if>
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                                                                            </1>
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                                                                            <2>$Infraspecific_epithet_matched</2>
90
                                                                        </_join_words>
91
                                                                    </5>
74
                                                                    <1>$Specific_epithet_matched</1>
75
                                                                    <2>$Unmatched_terms</2>
92 76
                                                                </_join_words>
93
                                                            </2>
94
                                                        </_alt>
95
                                                    </1>
96
                                                    <2>$Name_matched_author</2>
97
                                                </_join_words>
98
                                            </2>
99
                                        </_alt>
77
                                                            </3>
78
                                                            <5>
79
                                                                <_join_words>
80
                                                                    <1>
81
                                                                        <_if name="if has infraspecificEpithet">
82
                                                                            <cond>$Infraspecific_epithet_matched</cond>
83
                                                                            <then>$Name_matched_rank</then>
84
                                                                        </_if>
85
                                                                    </1>
86
                                                                    <2>$Infraspecific_epithet_matched</2>
87
                                                                </_join_words>
88
                                                            </5>
89
                                                        </_join_words>
90
                                                    </2>
91
                                                </_alt>
92
                                            </1>
93
                                            <2>$Name_matched_author</2>
94
                                        </_join_words>
100 95
                                    </identifyingtaxonomicname>
101 96
                                    <_set_canon_taxonconcept>
102 97
                                        <canon_taxonconcept_id>
......
134 129
                                            <2>$Infraspecific_epithet_matched</2>
135 130
                                        </_join_words>
136 131
                                    </subspecies>
132
                                    <taxonconcept fkey="canon_taxonconcept_id"><identifyingtaxonomicname>$Name_submitted</identifyingtaxonomicname></taxonconcept>
137 133
                                    <taxonomicname>$Name_matched</taxonomicname>
138
                                    <taxonomicnamewithauthor>$Name_submitted</taxonomicnamewithauthor>
139 134
                                </taxonconcept>
140 135
                            </taxonconcept_id>
141 136
                        </taxondetermination>

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