Revision 6375
Added by Aaron Marcuse-Kubitza over 11 years ago
| VegBIEN.csv | ||
|---|---|---|
| 1 | 1 |
MT,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments |
| 2 | 2 |
id,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1", |
| 3 |
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1", |
|
| 3 |
id,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists", |
|
| 4 |
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then", |
|
| 4 | 5 |
collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/2/_join/1", |
| 5 | 6 |
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/2/_join/2", |
| 6 | 7 |
id,"/location/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists", |
| 7 | 8 |
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count, |
| 8 | 9 |
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
| 9 | 10 |
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2, |
| 10 |
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcename/name, |
|
| 11 |
id,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcename/name/_if[@name=""if specimen""]/cond/_exists", |
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| 12 |
institutionCode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcename/name/_if[@name=""if specimen""]/then", |
|
| 11 | 13 |
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode, |
| 12 | 14 |
id,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists", |
| 13 | 15 |
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_alt/2/_map:[cultivated=t,wild=f,*=]/value", |
| ... | ... | |
| 25 | 27 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus, |
| 26 | 28 |
locality,/location/locationnarrative/_merge/1, |
| 27 | 29 |
continent,/location/locationplace/*_id/place/continent, |
| 30 |
id,"/source/shortname/_if[@name=""if specimen""]/cond/_exists", |
|
| 31 |
institutionCode,"/source/shortname/_if[@name=""if specimen""]/else", |
|
| 28 | 32 |
basisOfRecord,,** No join mapping for basisOfRecord ** |
| 29 | 33 |
countryCode,,** No join mapping for countryCode ** |
| 30 | 34 |
datasetName,,** No join mapping for datasetName ** |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: institutionCode: Remap to source.shortname when specimen information is not provided, as is the case for geoscrub.herbaria on nimoy