Revision 6403
Added by Aaron Marcuse-Kubitza over 11 years ago
| test.xml.ref | ||
|---|---|---|
| 1 | 1 |
Put template: |
| 2 | 2 |
<VegBIEN> |
| 3 |
<_simplifyPath id="-1"> |
|
| 4 |
<next>parent_id</next> |
|
| 3 |
<_setDefault id="-1"> |
|
| 4 |
<col>source_id</col> |
|
| 5 |
<value><source><shortname>MO</shortname></source></value> |
|
| 5 | 6 |
<path> |
| 6 |
<location> |
|
| 7 |
<authorlocationcode> |
|
| 8 |
<_join> |
|
| 9 |
<1>$InstitutionCode</1> |
|
| 10 |
<2>$CollectionCode</2> |
|
| 11 |
<3>$CatalogNumber</3> |
|
| 12 |
</_join> |
|
| 13 |
</authorlocationcode> |
|
| 14 |
<elevation_m> |
|
| 15 |
<_avg> |
|
| 16 |
<max>$MaximumElevation</max> |
|
| 17 |
<min>$MinimumElevation</min> |
|
| 18 |
</_avg> |
|
| 19 |
</elevation_m> |
|
| 20 |
<locationevent> |
|
| 21 |
<taxonoccurrence> |
|
| 22 |
<aggregateoccurrence> |
|
| 23 |
<collectiondate> |
|
| 24 |
<_date> |
|
| 25 |
<day> |
|
| 26 |
<_nullIf> |
|
| 27 |
<null>0</null> |
|
| 28 |
<type>float</type> |
|
| 29 |
<value>$DayCollected</value> |
|
| 30 |
</_nullIf> |
|
| 31 |
</day> |
|
| 32 |
<month> |
|
| 33 |
<_nullIf> |
|
| 34 |
<null>0</null> |
|
| 35 |
<type>float</type> |
|
| 36 |
<value>$MonthCollected</value> |
|
| 37 |
</_nullIf> |
|
| 38 |
</month> |
|
| 39 |
<year> |
|
| 40 |
<_nullIf> |
|
| 41 |
<null>0</null> |
|
| 42 |
<type>float</type> |
|
| 43 |
<value>$YearCollected</value> |
|
| 44 |
</_nullIf> |
|
| 45 |
</year> |
|
| 46 |
</_date> |
|
| 47 |
</collectiondate> |
|
| 48 |
<count>$IndividualCount</count> |
|
| 49 |
<notes> |
|
| 50 |
<_alt> |
|
| 51 |
<0>$convertednotes</0> |
|
| 52 |
<1>$notes</1> |
|
| 53 |
</_alt> |
|
| 54 |
</notes> |
|
| 55 |
<plantobservation> |
|
| 56 |
<collectionnumber>$CollectorNumber</collectionnumber> |
|
| 57 |
<specimenreplicate> |
|
| 58 |
<catalognumber_dwc>$CatalogNumber</catalognumber_dwc> |
|
| 59 |
<collectioncode_dwc>$CollectionCode</collectioncode_dwc> |
|
| 60 |
<institution_id> |
|
| 61 |
<sourcename> |
|
| 62 |
<matched_source_id><source><shortname>$InstitutionCode</shortname></source></matched_source_id> |
|
| 63 |
<name>$InstitutionCode</name> |
|
| 64 |
</sourcename> |
|
| 65 |
</institution_id> |
|
| 66 |
</specimenreplicate> |
|
| 67 |
</plantobservation> |
|
| 68 |
</aggregateoccurrence> |
|
| 69 |
<collector_id><party><fullname>$Collector</fullname></party></collector_id> |
|
| 70 |
<taxondetermination> |
|
| 71 |
<party_id><party><fullname>$IdentifiedBy</fullname></party></party_id> |
|
| 72 |
<taxonverbatim_id> |
|
| 73 |
<taxonverbatim> |
|
| 74 |
<taxonlabel_id> |
|
| 75 |
<taxonlabel> |
|
| 76 |
<matched_label_id> |
|
| 7 |
<_simplifyPath> |
|
| 8 |
<next>parent_id</next> |
|
| 9 |
<path> |
|
| 10 |
<location> |
|
| 11 |
<authorlocationcode> |
|
| 12 |
<_join> |
|
| 13 |
<1>$InstitutionCode</1> |
|
| 14 |
<2>$CollectionCode</2> |
|
| 15 |
<3>$CatalogNumber</3> |
|
| 16 |
</_join> |
|
| 17 |
</authorlocationcode> |
|
| 18 |
<elevation_m> |
|
| 19 |
<_avg> |
|
| 20 |
<max>$MaximumElevation</max> |
|
| 21 |
<min>$MinimumElevation</min> |
|
| 22 |
</_avg> |
|
| 23 |
</elevation_m> |
|
| 24 |
<locationevent> |
|
| 25 |
<taxonoccurrence> |
|
| 26 |
<aggregateoccurrence> |
|
| 27 |
<collectiondate> |
|
| 28 |
<_date> |
|
| 29 |
<day> |
|
| 30 |
<_nullIf> |
|
| 31 |
<null>0</null> |
|
| 32 |
<type>float</type> |
|
| 33 |
<value>$DayCollected</value> |
|
| 34 |
</_nullIf> |
|
| 35 |
</day> |
|
| 36 |
<month> |
|
| 37 |
<_nullIf> |
|
| 38 |
<null>0</null> |
|
| 39 |
<type>float</type> |
|
| 40 |
<value>$MonthCollected</value> |
|
| 41 |
</_nullIf> |
|
| 42 |
</month> |
|
| 43 |
<year> |
|
| 44 |
<_nullIf> |
|
| 45 |
<null>0</null> |
|
| 46 |
<type>float</type> |
|
| 47 |
<value>$YearCollected</value> |
|
| 48 |
</_nullIf> |
|
| 49 |
</year> |
|
| 50 |
</_date> |
|
| 51 |
</collectiondate> |
|
| 52 |
<count>$IndividualCount</count> |
|
| 53 |
<notes> |
|
| 54 |
<_alt> |
|
| 55 |
<0>$convertednotes</0> |
|
| 56 |
<1>$notes</1> |
|
| 57 |
</_alt> |
|
| 58 |
</notes> |
|
| 59 |
<plantobservation> |
|
| 60 |
<collectionnumber>$CollectorNumber</collectionnumber> |
|
| 61 |
<specimenreplicate> |
|
| 62 |
<catalognumber_dwc>$CatalogNumber</catalognumber_dwc> |
|
| 63 |
<collectioncode_dwc>$CollectionCode</collectioncode_dwc> |
|
| 64 |
<institution_id> |
|
| 65 |
<sourcename> |
|
| 66 |
<matched_source_id><source><shortname>$InstitutionCode</shortname></source></matched_source_id> |
|
| 67 |
<name>$InstitutionCode</name> |
|
| 68 |
</sourcename> |
|
| 69 |
</institution_id> |
|
| 70 |
</specimenreplicate> |
|
| 71 |
</plantobservation> |
|
| 72 |
</aggregateoccurrence> |
|
| 73 |
<collector_id><party><fullname>$Collector</fullname></party></collector_id> |
|
| 74 |
<taxondetermination> |
|
| 75 |
<party_id><party><fullname>$IdentifiedBy</fullname></party></party_id> |
|
| 76 |
<taxonverbatim_id> |
|
| 77 |
<taxonverbatim> |
|
| 78 |
<taxonlabel_id> |
|
| 77 | 79 |
<taxonlabel> |
| 78 |
<source_id><source><shortname>TNRS</shortname></source></source_id> |
|
| 79 |
<taxonomicname> |
|
| 80 |
<_join_words> |
|
| 81 |
<1> |
|
| 82 |
<_taxon_family_require_std> |
|
| 83 |
<family> |
|
| 84 |
<_nullIf> |
|
| 85 |
<null>$ScientificName</null> |
|
| 86 |
<value>$family</value> |
|
| 87 |
</_nullIf> |
|
| 88 |
</family> |
|
| 89 |
</_taxon_family_require_std> |
|
| 90 |
</1> |
|
| 91 |
<2> |
|
| 80 |
<matched_label_id> |
|
| 81 |
<taxonlabel> |
|
| 82 |
<source_id><source><shortname>TNRS</shortname></source></source_id> |
|
| 83 |
<taxonomicname> |
|
| 92 | 84 |
<_join_words> |
| 93 | 85 |
<1> |
| 94 |
<_alt> |
|
| 95 |
<1>$ScientificName</1> |
|
| 96 |
<2> |
|
| 97 |
<_join_words> |
|
| 98 |
<2>$genus</2> |
|
| 99 |
<3>$species</3> |
|
| 100 |
<4>$Subspecies</4> |
|
| 101 |
</_join_words> |
|
| 102 |
</2> |
|
| 103 |
</_alt> |
|
| 86 |
<_taxon_family_require_std> |
|
| 87 |
<family> |
|
| 88 |
<_nullIf> |
|
| 89 |
<null>$ScientificName</null> |
|
| 90 |
<value>$family</value> |
|
| 91 |
</_nullIf> |
|
| 92 |
</family> |
|
| 93 |
</_taxon_family_require_std> |
|
| 104 | 94 |
</1> |
| 105 |
<2>$ScientificNameAuthor</2> |
|
| 95 |
<2> |
|
| 96 |
<_join_words> |
|
| 97 |
<1> |
|
| 98 |
<_alt> |
|
| 99 |
<1>$ScientificName</1> |
|
| 100 |
<2> |
|
| 101 |
<_join_words> |
|
| 102 |
<2>$genus</2> |
|
| 103 |
<3>$species</3> |
|
| 104 |
<4>$Subspecies</4> |
|
| 105 |
</_join_words> |
|
| 106 |
</2> |
|
| 107 |
</_alt> |
|
| 108 |
</1> |
|
| 109 |
<2>$ScientificNameAuthor</2> |
|
| 110 |
</_join_words> |
|
| 111 |
</2> |
|
| 106 | 112 |
</_join_words> |
| 107 |
</2> |
|
| 108 |
</_join_words> |
|
| 109 |
</taxonomicname> |
|
| 110 |
</taxonlabel> |
|
| 111 |
</matched_label_id> |
|
| 112 |
<parent_id> |
|
| 113 |
<taxonlabel> |
|
| 113 |
</taxonomicname> |
|
| 114 |
</taxonlabel> |
|
| 115 |
</matched_label_id> |
|
| 114 | 116 |
<parent_id> |
| 115 | 117 |
<taxonlabel> |
| 116 |
<rank>cultivar</rank> |
|
| 117 | 118 |
<parent_id> |
| 118 | 119 |
<taxonlabel> |
| 119 |
<rank>forma</rank>
|
|
| 120 |
<rank>cultivar</rank>
|
|
| 120 | 121 |
<parent_id> |
| 121 | 122 |
<taxonlabel> |
| 122 |
<rank>variety</rank>
|
|
| 123 |
<rank>forma</rank>
|
|
| 123 | 124 |
<parent_id> |
| 124 | 125 |
<taxonlabel> |
| 125 |
<rank>subspecies</rank> |
|
| 126 |
<taxonepithet>$Subspecies</taxonepithet> |
|
| 126 |
<rank>variety</rank> |
|
| 127 | 127 |
<parent_id> |
| 128 | 128 |
<taxonlabel> |
| 129 |
<rank>species</rank> |
|
| 130 |
<taxonepithet>$species</taxonepithet> |
|
| 129 |
<rank>subspecies</rank>
|
|
| 130 |
<taxonepithet>$Subspecies</taxonepithet>
|
|
| 131 | 131 |
<parent_id> |
| 132 | 132 |
<taxonlabel> |
| 133 |
<rank>genus</rank>
|
|
| 134 |
<taxonepithet>$genus</taxonepithet>
|
|
| 133 |
<rank>species</rank>
|
|
| 134 |
<taxonepithet>$species</taxonepithet>
|
|
| 135 | 135 |
<parent_id> |
| 136 | 136 |
<taxonlabel> |
| 137 |
<rank>family</rank>
|
|
| 138 |
<taxonepithet>$family</taxonepithet>
|
|
| 137 |
<rank>genus</rank>
|
|
| 138 |
<taxonepithet>$genus</taxonepithet>
|
|
| 139 | 139 |
<parent_id> |
| 140 | 140 |
<taxonlabel> |
| 141 |
<rank>order</rank> |
|
| 141 |
<rank>family</rank> |
|
| 142 |
<taxonepithet>$family</taxonepithet> |
|
| 142 | 143 |
<parent_id> |
| 143 | 144 |
<taxonlabel> |
| 144 |
<rank>class</rank>
|
|
| 145 |
<rank>order</rank>
|
|
| 145 | 146 |
<parent_id> |
| 146 | 147 |
<taxonlabel> |
| 147 |
<rank>phylum</rank>
|
|
| 148 |
<rank>class</rank>
|
|
| 148 | 149 |
<parent_id> |
| 149 | 150 |
<taxonlabel> |
| 150 |
<rank>kingdom</rank> |
|
| 151 |
<taxonepithet>$Kingdom</taxonepithet> |
|
| 151 |
<rank>phylum</rank> |
|
| 152 |
<parent_id> |
|
| 153 |
<taxonlabel> |
|
| 154 |
<rank>kingdom</rank> |
|
| 155 |
<taxonepithet>$Kingdom</taxonepithet> |
|
| 156 |
</taxonlabel> |
|
| 157 |
</parent_id> |
|
| 152 | 158 |
</taxonlabel> |
| 153 | 159 |
</parent_id> |
| 154 | 160 |
</taxonlabel> |
| ... | ... | |
| 171 | 177 |
</parent_id> |
| 172 | 178 |
</taxonlabel> |
| 173 | 179 |
</parent_id> |
| 174 |
</taxonlabel> |
|
| 175 |
</parent_id> |
|
| 176 |
<taxonomicname> |
|
| 177 |
<_join_words> |
|
| 178 |
<1> |
|
| 179 |
<_taxon_family_require_std> |
|
| 180 |
<family> |
|
| 181 |
<_nullIf> |
|
| 182 |
<null>$ScientificName</null> |
|
| 183 |
<value>$family</value> |
|
| 184 |
</_nullIf> |
|
| 185 |
</family> |
|
| 186 |
</_taxon_family_require_std> |
|
| 187 |
</1> |
|
| 188 |
<2> |
|
| 180 |
<taxonomicname> |
|
| 189 | 181 |
<_join_words> |
| 190 | 182 |
<1> |
| 191 |
<_alt> |
|
| 192 |
<1>$ScientificName</1> |
|
| 193 |
<2> |
|
| 194 |
<_join_words> |
|
| 195 |
<2>$genus</2> |
|
| 196 |
<3>$species</3> |
|
| 197 |
<4>$Subspecies</4> |
|
| 198 |
</_join_words> |
|
| 199 |
</2> |
|
| 200 |
</_alt> |
|
| 183 |
<_taxon_family_require_std> |
|
| 184 |
<family> |
|
| 185 |
<_nullIf> |
|
| 186 |
<null>$ScientificName</null> |
|
| 187 |
<value>$family</value> |
|
| 188 |
</_nullIf> |
|
| 189 |
</family> |
|
| 190 |
</_taxon_family_require_std> |
|
| 201 | 191 |
</1> |
| 202 |
<2>$ScientificNameAuthor</2> |
|
| 192 |
<2> |
|
| 193 |
<_join_words> |
|
| 194 |
<1> |
|
| 195 |
<_alt> |
|
| 196 |
<1>$ScientificName</1> |
|
| 197 |
<2> |
|
| 198 |
<_join_words> |
|
| 199 |
<2>$genus</2> |
|
| 200 |
<3>$species</3> |
|
| 201 |
<4>$Subspecies</4> |
|
| 202 |
</_join_words> |
|
| 203 |
</2> |
|
| 204 |
</_alt> |
|
| 205 |
</1> |
|
| 206 |
<2>$ScientificNameAuthor</2> |
|
| 207 |
</_join_words> |
|
| 208 |
</2> |
|
| 203 | 209 |
</_join_words> |
| 204 |
</2> |
|
| 205 |
</_join_words> |
|
| 206 |
</taxonomicname> |
|
| 207 |
</taxonlabel> |
|
| 208 |
</taxonlabel_id> |
|
| 209 |
<author>$ScientificNameAuthor</author> |
|
| 210 |
<family>$family</family> |
|
| 211 |
<genus>$genus</genus> |
|
| 212 |
<specific_epithet>$species</specific_epithet> |
|
| 213 |
<taxonname>$ScientificName</taxonname> |
|
| 214 |
</taxonverbatim> |
|
| 215 |
</taxonverbatim_id> |
|
| 216 |
</taxondetermination> |
|
| 217 |
</taxonoccurrence> |
|
| 218 |
</locationevent> |
|
| 219 |
<locationnarrative>$Locality</locationnarrative> |
|
| 220 |
<locationplace> |
|
| 221 |
<place_id> |
|
| 222 |
<place> |
|
| 223 |
<coordinates_id> |
|
| 224 |
<coordinates> |
|
| 225 |
<latitude_deg> |
|
| 226 |
<_nullIf> |
|
| 227 |
<null>0</null> |
|
| 228 |
<type>float</type> |
|
| 229 |
<value>$latitude</value> |
|
| 230 |
</_nullIf> |
|
| 231 |
</latitude_deg> |
|
| 232 |
<longitude_deg> |
|
| 233 |
<_nullIf> |
|
| 234 |
<null>0</null> |
|
| 235 |
<type>float</type> |
|
| 236 |
<value>$longitude</value> |
|
| 237 |
</_nullIf> |
|
| 238 |
</longitude_deg> |
|
| 239 |
</coordinates> |
|
| 240 |
</coordinates_id> |
|
| 241 |
<continent>$ContinentOcean</continent> |
|
| 242 |
<country>$Country</country> |
|
| 243 |
<county>$County</county> |
|
| 244 |
<matched_place_id> |
|
| 210 |
</taxonomicname> |
|
| 211 |
</taxonlabel> |
|
| 212 |
</taxonlabel_id> |
|
| 213 |
<author>$ScientificNameAuthor</author> |
|
| 214 |
<family>$family</family> |
|
| 215 |
<genus>$genus</genus> |
|
| 216 |
<specific_epithet>$species</specific_epithet> |
|
| 217 |
<taxonname>$ScientificName</taxonname> |
|
| 218 |
</taxonverbatim> |
|
| 219 |
</taxonverbatim_id> |
|
| 220 |
</taxondetermination> |
|
| 221 |
</taxonoccurrence> |
|
| 222 |
</locationevent> |
|
| 223 |
<locationnarrative>$Locality</locationnarrative> |
|
| 224 |
<locationplace> |
|
| 225 |
<place_id> |
|
| 245 | 226 |
<place> |
| 246 |
<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 247 | 227 |
<coordinates_id> |
| 248 | 228 |
<coordinates> |
| 249 |
<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 250 | 229 |
<latitude_deg> |
| 251 | 230 |
<_nullIf> |
| 252 | 231 |
<null>0</null> |
| ... | ... | |
| 263 | 242 |
</longitude_deg> |
| 264 | 243 |
</coordinates> |
| 265 | 244 |
</coordinates_id> |
| 245 |
<continent>$ContinentOcean</continent> |
|
| 266 | 246 |
<country>$Country</country> |
| 267 | 247 |
<county>$County</county> |
| 248 |
<matched_place_id> |
|
| 249 |
<place> |
|
| 250 |
<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 251 |
<coordinates_id> |
|
| 252 |
<coordinates> |
|
| 253 |
<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 254 |
<latitude_deg> |
|
| 255 |
<_nullIf> |
|
| 256 |
<null>0</null> |
|
| 257 |
<type>float</type> |
|
| 258 |
<value>$latitude</value> |
|
| 259 |
</_nullIf> |
|
| 260 |
</latitude_deg> |
|
| 261 |
<longitude_deg> |
|
| 262 |
<_nullIf> |
|
| 263 |
<null>0</null> |
|
| 264 |
<type>float</type> |
|
| 265 |
<value>$longitude</value> |
|
| 266 |
</_nullIf> |
|
| 267 |
</longitude_deg> |
|
| 268 |
</coordinates> |
|
| 269 |
</coordinates_id> |
|
| 270 |
<country>$Country</country> |
|
| 271 |
<county>$County</county> |
|
| 272 |
<stateprovince>$StateProvince</stateprovince> |
|
| 273 |
</place> |
|
| 274 |
</matched_place_id> |
|
| 268 | 275 |
<stateprovince>$StateProvince</stateprovince> |
| 269 | 276 |
</place> |
| 270 |
</matched_place_id> |
|
| 271 |
<stateprovince>$StateProvince</stateprovince> |
|
| 272 |
</place> |
|
| 273 |
</place_id> |
|
| 274 |
</locationplace> |
|
| 275 |
</location> |
|
| 277 |
</place_id> |
|
| 278 |
</locationplace> |
|
| 279 |
</location> |
|
| 280 |
</path> |
|
| 281 |
</_simplifyPath> |
|
| 276 | 282 |
</path> |
| 277 |
</_simplifyPath>
|
|
| 283 |
</_setDefault>
|
|
| 278 | 284 |
</VegBIEN> |
| 279 | 285 |
Inserted 40 new rows into database |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Set the source_id col_default to the datasource name using the new _setDefault() built-in function and _env()