Revision 6403
Added by Aaron Marcuse-Kubitza over 11 years ago
| test.xml.ref | ||
|---|---|---|
| 1 | 1 |
Put template: |
| 2 | 2 |
<VegBIEN> |
| 3 |
<_simplifyPath id="-1"> |
|
| 4 |
<next>parent_id</next> |
|
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<_setDefault id="-1"> |
|
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<col>source_id</col> |
|
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<value><source><shortname>REMIB</shortname></source></value> |
|
| 5 | 6 |
<path> |
| 6 |
<location> |
|
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<authorlocationcode> |
|
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<_join> |
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<1>$acronym</1> |
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<3>$accession_number</3> |
|
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</_join> |
|
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</authorlocationcode> |
|
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<locationevent> |
|
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<taxonoccurrence> |
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<aggregateoccurrence> |
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<collectiondate> |
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<_date> |
|
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<day> |
|
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$coll_day</value> |
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</_nullIf> |
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</day> |
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<month> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$coll_month</value> |
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</_nullIf> |
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</month> |
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<year> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$coll_year</value> |
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</_nullIf> |
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</year> |
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</_date> |
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</collectiondate> |
|
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<plantobservation> |
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<specimenreplicate> |
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<catalognumber_dwc>$accession_number</catalognumber_dwc> |
|
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<institution_id> |
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<sourcename> |
|
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<matched_source_id><source><shortname>$acronym</shortname></source></matched_source_id> |
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<name>$acronym</name> |
|
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</sourcename> |
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</institution_id> |
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</specimenreplicate> |
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</plantobservation> |
|
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</aggregateoccurrence> |
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<collector_id><party><fullname>$collector</fullname></party></collector_id> |
|
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<taxondetermination> |
|
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<taxonverbatim_id> |
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<taxonverbatim> |
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<taxonlabel_id> |
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<taxonlabel> |
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<matched_label_id> |
|
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<_simplifyPath> |
|
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<next>parent_id</next> |
|
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<path> |
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<location> |
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<authorlocationcode> |
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<_join> |
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<1>$acronym</1> |
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<3>$accession_number</3> |
|
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</_join> |
|
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</authorlocationcode> |
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<locationevent> |
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<taxonoccurrence> |
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<aggregateoccurrence> |
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<collectiondate> |
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<_date> |
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<day> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$coll_day</value> |
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</_nullIf> |
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</day> |
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<month> |
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<_nullIf> |
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<null>0</null> |
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<type>float</type> |
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<value>$coll_month</value> |
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</_nullIf> |
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</month> |
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<year> |
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<_nullIf> |
|
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<null>0</null> |
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<type>float</type> |
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<value>$coll_year</value> |
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</_nullIf> |
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</year> |
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</_date> |
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</collectiondate> |
|
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<plantobservation> |
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<specimenreplicate> |
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<catalognumber_dwc>$accession_number</catalognumber_dwc> |
|
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<institution_id> |
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<sourcename> |
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<matched_source_id><source><shortname>$acronym</shortname></source></matched_source_id> |
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<name>$acronym</name> |
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</sourcename> |
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</institution_id> |
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</specimenreplicate> |
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</plantobservation> |
|
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</aggregateoccurrence> |
|
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<collector_id><party><fullname>$collector</fullname></party></collector_id> |
|
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<taxondetermination> |
|
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<taxonverbatim_id> |
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<taxonverbatim> |
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<taxonlabel_id> |
|
| 60 | 62 |
<taxonlabel> |
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<source_id><source><shortname>TNRS</shortname></source></source_id> |
|
| 62 |
<taxonomicname> |
|
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<_join_words> |
|
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<1><_taxon_family_require_std><family>$family</family></_taxon_family_require_std></1> |
|
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<2> |
|
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<matched_label_id> |
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<taxonlabel> |
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<source_id><source><shortname>TNRS</shortname></source></source_id> |
|
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<taxonomicname> |
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| 66 | 67 |
<_join_words> |
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<2>$genus</2> |
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<3>$specificEpithet</3> |
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<1><_taxon_family_require_std><family>$family</family></_taxon_family_require_std></1> |
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<2> |
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<_join_words> |
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<2>$genus</2> |
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<3>$specificEpithet</3> |
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</_join_words> |
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</2> |
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| 69 | 75 |
</_join_words> |
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</2> |
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</_join_words> |
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</taxonomicname> |
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</taxonlabel> |
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</matched_label_id> |
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<parent_id> |
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<taxonlabel> |
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</taxonomicname> |
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</taxonlabel> |
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</matched_label_id> |
|
| 77 | 79 |
<parent_id> |
| 78 | 80 |
<taxonlabel> |
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<rank>cultivar</rank> |
|
| 80 | 81 |
<parent_id> |
| 81 | 82 |
<taxonlabel> |
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<rank>forma</rank>
|
|
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<rank>cultivar</rank>
|
|
| 83 | 84 |
<parent_id> |
| 84 | 85 |
<taxonlabel> |
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<rank>variety</rank>
|
|
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<rank>forma</rank>
|
|
| 86 | 87 |
<parent_id> |
| 87 | 88 |
<taxonlabel> |
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<rank>subspecies</rank>
|
|
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<rank>variety</rank>
|
|
| 89 | 90 |
<parent_id> |
| 90 | 91 |
<taxonlabel> |
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<rank>species</rank> |
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<taxonepithet>$specificEpithet</taxonepithet> |
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<rank>subspecies</rank> |
|
| 93 | 93 |
<parent_id> |
| 94 | 94 |
<taxonlabel> |
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<rank>genus</rank>
|
|
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<taxonepithet>$genus</taxonepithet>
|
|
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<rank>species</rank>
|
|
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<taxonepithet>$specificEpithet</taxonepithet>
|
|
| 97 | 97 |
<parent_id> |
| 98 | 98 |
<taxonlabel> |
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<rank>family</rank> |
|
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<taxonepithet>$family</taxonepithet> |
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<rank>genus</rank> |
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<taxonepithet>$genus</taxonepithet> |
|
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<parent_id> |
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<taxonlabel> |
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<rank>family</rank> |
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<taxonepithet>$family</taxonepithet> |
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</taxonlabel> |
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</parent_id> |
|
| 101 | 107 |
</taxonlabel> |
| 102 | 108 |
</parent_id> |
| 103 | 109 |
</taxonlabel> |
| ... | ... | |
| 112 | 118 |
</parent_id> |
| 113 | 119 |
</taxonlabel> |
| 114 | 120 |
</parent_id> |
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</taxonlabel> |
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</parent_id> |
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<taxonomicname> |
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<_join_words> |
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<1><_taxon_family_require_std><family>$family</family></_taxon_family_require_std></1> |
|
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<2> |
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<taxonomicname> |
|
| 121 | 122 |
<_join_words> |
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<2>$genus</2> |
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<3>$specificEpithet</3> |
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<1><_taxon_family_require_std><family>$family</family></_taxon_family_require_std></1> |
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<2> |
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<_join_words> |
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<2>$genus</2> |
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<3>$specificEpithet</3> |
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</_join_words> |
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</2> |
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| 124 | 130 |
</_join_words> |
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</2> |
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</_join_words> |
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</taxonomicname> |
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</taxonlabel> |
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</taxonlabel_id> |
|
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<family>$family</family> |
|
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<genus>$genus</genus> |
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<specific_epithet>$specificEpithet</specific_epithet> |
|
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</taxonverbatim> |
|
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</taxonverbatim_id> |
|
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</taxondetermination> |
|
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</taxonoccurrence> |
|
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</locationevent> |
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<locationnarrative> |
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<_merge> |
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<1>$locality</1> |
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<3> |
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<_label> |
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<label>habitat</label> |
|
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<value>$habitat</value> |
|
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</_label> |
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</3> |
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</_merge> |
|
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</locationnarrative> |
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<locationplace> |
|
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<place_id> |
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<place> |
|
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<coordinates_id> |
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<coordinates> |
|
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<latitude_deg> |
|
| 155 |
<_nullIf> |
|
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<null>0</null> |
|
| 157 |
<type>float</type> |
|
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<value>$lat_deg</value> |
|
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</_nullIf> |
|
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</latitude_deg> |
|
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<longitude_deg> |
|
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<_nullIf> |
|
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<null>0</null> |
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<type>float</type> |
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<value>$long_deg</value> |
|
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</_nullIf> |
|
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</longitude_deg> |
|
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</coordinates> |
|
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</coordinates_id> |
|
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<country>$country</country> |
|
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<county>$county</county> |
|
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<matched_place_id> |
|
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</taxonomicname> |
|
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</taxonlabel> |
|
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</taxonlabel_id> |
|
| 134 |
<family>$family</family> |
|
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<genus>$genus</genus> |
|
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<specific_epithet>$specificEpithet</specific_epithet> |
|
| 137 |
</taxonverbatim> |
|
| 138 |
</taxonverbatim_id> |
|
| 139 |
</taxondetermination> |
|
| 140 |
</taxonoccurrence> |
|
| 141 |
</locationevent> |
|
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<locationnarrative> |
|
| 143 |
<_merge> |
|
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<1>$locality</1> |
|
| 145 |
<3> |
|
| 146 |
<_label> |
|
| 147 |
<label>habitat</label> |
|
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<value>$habitat</value> |
|
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</_label> |
|
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</3> |
|
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</_merge> |
|
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</locationnarrative> |
|
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<locationplace> |
|
| 154 |
<place_id> |
|
| 173 | 155 |
<place> |
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<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 175 | 156 |
<coordinates_id> |
| 176 | 157 |
<coordinates> |
| 177 |
<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 178 | 158 |
<latitude_deg> |
| 179 | 159 |
<_nullIf> |
| 180 | 160 |
<null>0</null> |
| ... | ... | |
| 193 | 173 |
</coordinates_id> |
| 194 | 174 |
<country>$country</country> |
| 195 | 175 |
<county>$county</county> |
| 176 |
<matched_place_id> |
|
| 177 |
<place> |
|
| 178 |
<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 179 |
<coordinates_id> |
|
| 180 |
<coordinates> |
|
| 181 |
<source_id><source><shortname>geoscrub</shortname></source></source_id> |
|
| 182 |
<latitude_deg> |
|
| 183 |
<_nullIf> |
|
| 184 |
<null>0</null> |
|
| 185 |
<type>float</type> |
|
| 186 |
<value>$lat_deg</value> |
|
| 187 |
</_nullIf> |
|
| 188 |
</latitude_deg> |
|
| 189 |
<longitude_deg> |
|
| 190 |
<_nullIf> |
|
| 191 |
<null>0</null> |
|
| 192 |
<type>float</type> |
|
| 193 |
<value>$long_deg</value> |
|
| 194 |
</_nullIf> |
|
| 195 |
</longitude_deg> |
|
| 196 |
</coordinates> |
|
| 197 |
</coordinates_id> |
|
| 198 |
<country>$country</country> |
|
| 199 |
<county>$county</county> |
|
| 200 |
<stateprovince>$state</stateprovince> |
|
| 201 |
</place> |
|
| 202 |
</matched_place_id> |
|
| 196 | 203 |
<stateprovince>$state</stateprovince> |
| 197 | 204 |
</place> |
| 198 |
</matched_place_id> |
|
| 199 |
<stateprovince>$state</stateprovince> |
|
| 200 |
</place> |
|
| 201 |
</place_id> |
|
| 202 |
</locationplace> |
|
| 203 |
</location> |
|
| 205 |
</place_id> |
|
| 206 |
</locationplace> |
|
| 207 |
</location> |
|
| 208 |
</path> |
|
| 209 |
</_simplifyPath> |
|
| 204 | 210 |
</path> |
| 205 |
</_simplifyPath>
|
|
| 211 |
</_setDefault>
|
|
| 206 | 212 |
</VegBIEN> |
| 207 | 213 |
Inserted 33 new rows into database |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Set the source_id col_default to the datasource name using the new _setDefault() built-in function and _env()