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Revision 6409

Added by Aaron Marcuse-Kubitza about 12 years ago

mappings/VegCore-VegBIEN.csv: source table mappings: Set shortname to env var $source when it's not explicitly specified, because shortname is a required field of source

View differences:

VegBIEN.csv
1 1 
REMIB,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2 
accession_number,"/_if[@name=""if specimen""]/cond/_exists","Not globally unique, only (usually) unique within the institution providing the data (""acronym""). Note that there are nevertheless 11,869 rows where an accession_number appears multiple times within the same institution. [1]
3 

  		




  
  4
  
    
[1] Using the following query:


  		




  
  5
  
    
-----


  		




  
  6
  
    
SELECT acronym, accession_number, count(*)


  		




  
  7
  
    
FROM ""REMIB"".""Specimen""


  		




  
  8
  
    
GROUP BY acronym, accession_number


  		




  
  9
  
    
HAVING count(*) > 1


  		




  
  10
  
    
-----"


  		




  
  11
  
    
acronym,"/_if[@name=""if specimen""]/else/source/shortname/_first/1",


  		




  2
  12
  
    
accession_number,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists","Not globally unique, only (usually) unique within the institution providing the data (""acronym""). Note that there are nevertheless 11,869 rows where an accession_number appears multiple times within the same institution. [1]


  		




  3
  13
  
    

  		




  4
  14
  
    
[1] Using the following query:


  		




  ......




  86
  96
  
    
county,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,


  		




  87
  97
  
    
state,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,


  		




  88
  98
  
    
state,/location/locationplace/*_id/place/stateprovince,


  		




  89
  
  
    
accession_number,"/source/shortname/_if[@name=""if specimen""]/cond/_exists","Not globally unique, only (usually) unique within the institution providing the data (""acronym""). Note that there are nevertheless 11,869 rows where an accession_number appears multiple times within the same institution. [1]


  		




  90
  
  
    

  		




  91
  
  
    
[1] Using the following query:


  		




  92
  
  
    
-----


  		




  93
  
  
    
SELECT acronym, accession_number, count(*)


  		




  94
  
  
    
FROM ""REMIB"".""Specimen""


  		




  95
  
  
    
GROUP BY acronym, accession_number


  		




  96
  
  
    
HAVING count(*) > 1


  		




  97
  
  
    
-----"


  		




  98
  
  
    
acronym,"/source/shortname/_if[@name=""if specimen""]/else",


  		




  99
  99
  
    
lat_min,,** No join mapping for *lat_min ** 


  		




  100
  100
  
    
lat_sec,,** No join mapping for *lat_sec ** 


  		




  101
  101
  
    
long_min,,** No join mapping for *long_min ** 


  		












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