Revision 7133
Added by Aaron Marcuse-Kubitza over 11 years ago
| tnrs_db | ||
|---|---|---|
| 28 | 28 |
tnrs_input = sql_gen.Table('tnrs_input_name')
|
| 29 | 29 |
tnrs_data = sql_gen.Table('tnrs')
|
| 30 | 30 |
time_col_name = 'Time_submitted' |
| 31 |
name_col_name = 'Accepted_scientific_name' |
|
| 31 | 32 |
|
| 32 | 33 |
def main(): |
| 33 | 34 |
# Input |
| ... | ... | |
| 79 | 80 |
log('Storing TNRS response data')
|
| 80 | 81 |
reader, header = csvs.reader_and_header(stream) |
| 81 | 82 |
header.insert(0, time_col_name) |
| 83 |
name_col_idx = len(header) |
|
| 84 |
header.append(name_col_name) |
|
| 82 | 85 |
reader = csvs.ColInsertFilter(reader, lambda row, row_num: now_str) |
| 86 |
reader = csvs.ColInsertFilter(reader, lambda row, row_num: None, |
|
| 87 |
name_col_idx) |
|
| 83 | 88 |
sql_io.append_csv(db, tnrs_data, reader, header) |
| 84 | 89 |
|
| 85 | 90 |
main() |
Also available in: Unified diff
inputs/.TNRS/schema.sql: tnrs: Added Accepted_scientific_name field which will contain the joined-together accepted name that gets re-parsed by TNRS