| 1 |
6406
|
aaronmk
|
VegBank,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
|
| 2 |
6409
|
aaronmk
|
museumaccessionnumber,"/_if[@name=""if specimen""]/cond/_exists",
|
| 3 |
6777
|
aaronmk
|
:plot,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/observationtype",
|
| 4 |
6757
|
aaronmk
|
:plot,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/cond/_eq:[right=plot]/left",
|
| 5 |
6756
|
aaronmk
|
museumaccessionnumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
|
| 6 |
|
|
museumaccessionnumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
| 7 |
|
|
museumaccessionnumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
|
| 8 |
6432
|
aaronmk
|
taxonobservation_id,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 9 |
4531
|
aaronmk
|
observation_id,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
|
| 10 |
5977
|
aaronmk
|
observation_id,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/cond/_exists",
|
| 11 |
|
|
observation_id,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/sourceaccessioncode",
|
| 12 |
6217
|
aaronmk
|
collectiondate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
|
| 13 |
4529
|
aaronmk
|
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
|
| 14 |
|
|
museumaccessionnumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
|
| 15 |
6791
|
aaronmk
|
museumaccessionnumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
|
| 16 |
6992
|
aaronmk
|
observation_id,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
|
| 17 |
|
|
authorplantname,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/1",
|
| 18 |
6176
|
aaronmk
|
givenname,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join_words/1,
|
| 19 |
|
|
surname,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join_words/2,
|
| 20 |
6313
|
aaronmk
|
taxonobservation_id,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 21 |
4529
|
aaronmk
|
taxonobservation_id,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
|
| 22 |
6217
|
aaronmk
|
interpretationdate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/creationdate/_alt/1/_dateRangeStart/value,
|
| 23 |
5657
|
aaronmk
|
Forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=forma]/taxonepithet",
|
| 24 |
|
|
Variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=variety]/taxonepithet",
|
| 25 |
|
|
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet",
|
| 26 |
|
|
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
| 27 |
6179
|
aaronmk
|
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
| 28 |
5657
|
aaronmk
|
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
| 29 |
6179
|
aaronmk
|
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
| 30 |
5657
|
aaronmk
|
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
| 31 |
|
|
Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=order]/taxonepithet",
|
| 32 |
|
|
Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=class]/taxonepithet",
|
| 33 |
|
|
Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet",
|
| 34 |
7157
|
aaronmk
|
taxonobservation_id,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_if[@name=""if has taxondetermination""]/cond/_exists",
|
| 35 |
7142
|
aaronmk
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family,
|
| 36 |
|
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
| 37 |
|
|
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
|
| 38 |
|
|
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/4,
|
| 39 |
|
|
Variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
|
| 40 |
|
|
Forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
|
| 41 |
5657
|
aaronmk
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
|
| 42 |
|
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
|
| 43 |
5783
|
aaronmk
|
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet,
|
| 44 |
7157
|
aaronmk
|
taxonobservation_id,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/cond/_exists",
|
| 45 |
6217
|
aaronmk
|
interpretationdate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_dateRangeStart/value,
|
| 46 |
4638
|
aaronmk
|
taxonfit,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
|
| 47 |
7142
|
aaronmk
|
authorplantname,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1,
|
| 48 |
5948
|
aaronmk
|
authorplantname,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonname,
|
| 49 |
4529
|
aaronmk
|
museumaccessionnumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
|
| 50 |
4979
|
aaronmk
|
Division,,** No join mapping for *Division **
|
| 51 |
|
|
Subclass,,** No join mapping for *Subclass **
|
| 52 |
|
|
Subdivision,,** No join mapping for *Subdivision **
|
| 53 |
|
|
Subkingdom,,** No join mapping for *Subkingdom **
|
| 54 |
|
|
Superdivision,,** No join mapping for *Superdivision **
|
| 55 |
6175
|
aaronmk
|
accessioncode,,** No join mapping for *accessioncode **
|
| 56 |
4979
|
aaronmk
|
collectionnumber,,** No join mapping for *collectionnumber **
|
| 57 |
|
|
collector_id,,** No join mapping for *collector_id **
|
| 58 |
6175
|
aaronmk
|
contactinstructions,,** No join mapping for *contactinstructions **
|
| 59 |
4979
|
aaronmk
|
currentinterpretation,,** No join mapping for *currentinterpretation **
|
| 60 |
6175
|
aaronmk
|
currentname_id,,** No join mapping for *currentname_id **
|
| 61 |
4979
|
aaronmk
|
d_currentaccepted,,** No join mapping for *d_currentaccepted **
|
| 62 |
|
|
d_obscount,,** No join mapping for *d_obscount **
|
| 63 |
6175
|
aaronmk
|
email,,** No join mapping for *email **
|
| 64 |
4979
|
aaronmk
|
emb_taxoninterpretation,,** No join mapping for *emb_taxoninterpretation **
|
| 65 |
|
|
emb_taxonobservation,,** No join mapping for *emb_taxonobservation **
|
| 66 |
|
|
grouptype,,** No join mapping for *grouptype **
|
| 67 |
|
|
int_currplantcode,,** No join mapping for *int_currplantcode **
|
| 68 |
|
|
int_currplantcommon,,** No join mapping for *int_currplantcommon **
|
| 69 |
|
|
int_currplantconcept_id,,** No join mapping for *int_currplantconcept_id **
|
| 70 |
|
|
int_currplantscifull,,** No join mapping for *int_currplantscifull **
|
| 71 |
|
|
int_currplantscinamenoauth,,** No join mapping for *int_currplantscinamenoauth **
|
| 72 |
|
|
int_origplantcode,,** No join mapping for *int_origplantcode **
|
| 73 |
|
|
int_origplantcommon,,** No join mapping for *int_origplantcommon **
|
| 74 |
|
|
int_origplantconcept_id,,** No join mapping for *int_origplantconcept_id **
|
| 75 |
|
|
int_origplantscifull,,** No join mapping for *int_origplantscifull **
|
| 76 |
|
|
int_origplantscinamenoauth,,** No join mapping for *int_origplantscinamenoauth **
|
| 77 |
7111
|
aaronmk
|
interpretationtype,,** No join mapping for interpretationType **
|
| 78 |
6175
|
aaronmk
|
middlename,,** No join mapping for *middlename **
|
| 79 |
4979
|
aaronmk
|
museum_id,,** No join mapping for *museum_id **
|
| 80 |
|
|
notesmgt,,** No join mapping for *notesmgt **
|
| 81 |
|
|
notespublic,,** No join mapping for *notespublic **
|
| 82 |
6175
|
aaronmk
|
organizationname,,** No join mapping for *organizationname **
|
| 83 |
4979
|
aaronmk
|
originalinterpretation,,** No join mapping for *originalinterpretation **
|
| 84 |
6175
|
aaronmk
|
party_d_obscount,,** No join mapping for *party_d_obscount **
|
| 85 |
4979
|
aaronmk
|
party_id,,** No join mapping for *party_id **
|
| 86 |
6175
|
aaronmk
|
partypublic,,** No join mapping for *partypublic **
|
| 87 |
|
|
partytype,,** No join mapping for *partytype **
|
| 88 |
4979
|
aaronmk
|
plantcode,,** No join mapping for *plantcode **
|
| 89 |
|
|
plantconcept_accessioncode,,** No join mapping for *plantconcept_accessioncode **
|
| 90 |
|
|
plantconcept_id,,** No join mapping for *plantconcept_id **
|
| 91 |
|
|
plantconcept_reference_id,,** No join mapping for *plantconcept_reference_id **
|
| 92 |
|
|
plantdescription,,** No join mapping for *plantdescription **
|
| 93 |
|
|
plantname,,** No join mapping for *plantname **
|
| 94 |
|
|
plantname_id,,** No join mapping for *plantname_id **
|
| 95 |
|
|
reference_id,,** No join mapping for *reference_id **
|
| 96 |
|
|
revisions,,** No join mapping for *revisions **
|
| 97 |
|
|
role_id,,** No join mapping for *role_id **
|
| 98 |
6175
|
aaronmk
|
salutation,,** No join mapping for *salutation **
|
| 99 |
4979
|
aaronmk
|
stemlocation_id,,** No join mapping for *stemlocation_id **
|
| 100 |
|
|
taxonconfidence,,** No join mapping for *taxonconfidence **
|
| 101 |
|
|
taxoninferencearea,,** No join mapping for *taxoninferencearea **
|
| 102 |
|
|
taxoninterpretation_accessioncode,,** No join mapping for *taxoninterpretation_accessioncode **
|
| 103 |
|
|
taxoninterpretation_id,,** No join mapping for *taxoninterpretation_id **
|
| 104 |
6175
|
aaronmk
|
taxoninterpretation_party_id,,** No join mapping for *taxoninterpretation_party_id **
|
| 105 |
4979
|
aaronmk
|
taxoninterpretation_plantname_id,,** No join mapping for *taxoninterpretation_plantname_id **
|
| 106 |
|
|
taxonobservation_accessioncode,,** No join mapping for *taxonobservation_accessioncode **
|
| 107 |
|
|
taxonobservation_reference_id,,** No join mapping for *taxonobservation_reference_id **
|
