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1
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VegBank,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
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2
|
museumaccessionnumber,"/_if[@name=""if specimen""]/cond/_exists",
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3
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:plot,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/observationtype",
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4
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:plot,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/cond/_eq:[right=plot]/left",
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5
|
museumaccessionnumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
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6
|
museumaccessionnumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
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7
|
museumaccessionnumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
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8
|
taxonobservation_id,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
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9
|
observation_id,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
|
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10
|
observation_id,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/cond/_exists",
|
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11
|
observation_id,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/sourceaccessioncode",
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12
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collectiondate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
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13
|
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
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14
|
museumaccessionnumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
|
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15
|
museumaccessionnumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
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16
|
observation_id,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
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17
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authorplantname,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/1",
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18
|
givenname,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join_words/1,
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19
|
surname,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join_words/2,
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20
|
taxonobservation_id,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
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21
|
taxonobservation_id,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
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22
|
interpretationdate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/creationdate/_alt/1/_dateRangeStart/value,
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23
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Forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=forma]/taxonepithet",
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24
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Variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=variety]/taxonepithet",
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25
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Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet",
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26
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Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
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27
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
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28
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
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29
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Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
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30
|
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
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31
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Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=order]/taxonepithet",
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32
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Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=class]/taxonepithet",
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33
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Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet",
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34
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taxonobservation_id,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_if[@name=""if has taxondetermination""]/cond/_exists",
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35
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family,
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36
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2,
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37
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Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
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38
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Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/4,
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39
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Variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
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40
|
Forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
|
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41
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
|
|
42
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
|
|
43
|
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet,
|
|
44
|
taxonobservation_id,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/cond/_exists",
|
|
45
|
interpretationdate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_dateRangeStart/value,
|
|
46
|
taxonfit,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
|
|
47
|
authorplantname,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1,
|
|
48
|
authorplantname,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonname,
|
|
49
|
museumaccessionnumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
|
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50
|
Division,,** No join mapping for *Division **
|
|
51
|
Subclass,,** No join mapping for *Subclass **
|
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52
|
Subdivision,,** No join mapping for *Subdivision **
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|
53
|
Subkingdom,,** No join mapping for *Subkingdom **
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54
|
Superdivision,,** No join mapping for *Superdivision **
|
|
55
|
accessioncode,,** No join mapping for *accessioncode **
|
|
56
|
collectionnumber,,** No join mapping for *collectionnumber **
|
|
57
|
collector_id,,** No join mapping for *collector_id **
|
|
58
|
contactinstructions,,** No join mapping for *contactinstructions **
|
|
59
|
currentinterpretation,,** No join mapping for *currentinterpretation **
|
|
60
|
currentname_id,,** No join mapping for *currentname_id **
|
|
61
|
d_currentaccepted,,** No join mapping for *d_currentaccepted **
|
|
62
|
d_obscount,,** No join mapping for *d_obscount **
|
|
63
|
email,,** No join mapping for *email **
|
|
64
|
emb_taxoninterpretation,,** No join mapping for *emb_taxoninterpretation **
|
|
65
|
emb_taxonobservation,,** No join mapping for *emb_taxonobservation **
|
|
66
|
grouptype,,** No join mapping for *grouptype **
|
|
67
|
int_currplantcode,,** No join mapping for *int_currplantcode **
|
|
68
|
int_currplantcommon,,** No join mapping for *int_currplantcommon **
|
|
69
|
int_currplantconcept_id,,** No join mapping for *int_currplantconcept_id **
|
|
70
|
int_currplantscifull,,** No join mapping for *int_currplantscifull **
|
|
71
|
int_currplantscinamenoauth,,** No join mapping for *int_currplantscinamenoauth **
|
|
72
|
int_origplantcode,,** No join mapping for *int_origplantcode **
|
|
73
|
int_origplantcommon,,** No join mapping for *int_origplantcommon **
|
|
74
|
int_origplantconcept_id,,** No join mapping for *int_origplantconcept_id **
|
|
75
|
int_origplantscifull,,** No join mapping for *int_origplantscifull **
|
|
76
|
int_origplantscinamenoauth,,** No join mapping for *int_origplantscinamenoauth **
|
|
77
|
interpretationtype,,** No join mapping for interpretationType **
|
|
78
|
middlename,,** No join mapping for *middlename **
|
|
79
|
museum_id,,** No join mapping for *museum_id **
|
|
80
|
notesmgt,,** No join mapping for *notesmgt **
|
|
81
|
notespublic,,** No join mapping for *notespublic **
|
|
82
|
organizationname,,** No join mapping for *organizationname **
|
|
83
|
originalinterpretation,,** No join mapping for *originalinterpretation **
|
|
84
|
party_d_obscount,,** No join mapping for *party_d_obscount **
|
|
85
|
party_id,,** No join mapping for *party_id **
|
|
86
|
partypublic,,** No join mapping for *partypublic **
|
|
87
|
partytype,,** No join mapping for *partytype **
|
|
88
|
plantcode,,** No join mapping for *plantcode **
|
|
89
|
plantconcept_accessioncode,,** No join mapping for *plantconcept_accessioncode **
|
|
90
|
plantconcept_id,,** No join mapping for *plantconcept_id **
|
|
91
|
plantconcept_reference_id,,** No join mapping for *plantconcept_reference_id **
|
|
92
|
plantdescription,,** No join mapping for *plantdescription **
|
|
93
|
plantname,,** No join mapping for *plantname **
|
|
94
|
plantname_id,,** No join mapping for *plantname_id **
|
|
95
|
reference_id,,** No join mapping for *reference_id **
|
|
96
|
revisions,,** No join mapping for *revisions **
|
|
97
|
role_id,,** No join mapping for *role_id **
|
|
98
|
salutation,,** No join mapping for *salutation **
|
|
99
|
stemlocation_id,,** No join mapping for *stemlocation_id **
|
|
100
|
taxonconfidence,,** No join mapping for *taxonconfidence **
|
|
101
|
taxoninferencearea,,** No join mapping for *taxoninferencearea **
|
|
102
|
taxoninterpretation_accessioncode,,** No join mapping for *taxoninterpretation_accessioncode **
|
|
103
|
taxoninterpretation_id,,** No join mapping for *taxoninterpretation_id **
|
|
104
|
taxoninterpretation_party_id,,** No join mapping for *taxoninterpretation_party_id **
|
|
105
|
taxoninterpretation_plantname_id,,** No join mapping for *taxoninterpretation_plantname_id **
|
|
106
|
taxonobservation_accessioncode,,** No join mapping for *taxonobservation_accessioncode **
|
|
107
|
taxonobservation_reference_id,,** No join mapping for *taxonobservation_reference_id **
|
