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Revision 7811

inputs/UNCC/Specimen/map.csv: Fixed embedded line endings

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VegBIEN.csv
1 1
UNCC,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2
accession,"/_if[@name=""if specimen""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.

3

  
4
[1] Using the following query:

5
-----

6
SELECT herbarium, accession, count(*)

7
FROM ""UNCC"".""Specimen""

8
GROUP BY herbarium, accession

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HAVING count(*) > 1

2
accession,"/_if[@name=""if specimen""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.
3

  
4
[1] Using the following query:
5
-----
6
SELECT herbarium, accession, count(*)
7
FROM ""UNCC"".""Specimen""
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GROUP BY herbarium, accession
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HAVING count(*) > 1
10 10
-----"
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accession,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.

12

  
13
[1] Using the following query:

14
-----

15
SELECT herbarium, accession, count(*)

16
FROM ""UNCC"".""Specimen""

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GROUP BY herbarium, accession

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HAVING count(*) > 1

11
accession,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.
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13
[1] Using the following query:
14
-----
15
SELECT herbarium, accession, count(*)
16
FROM ""UNCC"".""Specimen""
17
GROUP BY herbarium, accession
18
HAVING count(*) > 1
19 19
-----"
20
accession,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.

21

  
22
[1] Using the following query:

23
-----

24
SELECT herbarium, accession, count(*)

25
FROM ""UNCC"".""Specimen""

26
GROUP BY herbarium, accession

27
HAVING count(*) > 1

20
accession,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.
21

  
22
[1] Using the following query:
23
-----
24
SELECT herbarium, accession, count(*)
25
FROM ""UNCC"".""Specimen""
26
GROUP BY herbarium, accession
27
HAVING count(*) > 1
28 28
-----"
29 29
herbarium,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then/_first/1/_map:[UNCCD=UNCC,*=*]/value","""The name or acronym in use by the institution that donated the collection"" (https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode). UNCCD likely = UNCC database."
30
accession,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.

31

  
32
[1] Using the following query:

33
-----

34
SELECT herbarium, accession, count(*)

35
FROM ""UNCC"".""Specimen""

36
GROUP BY herbarium, accession

37
HAVING count(*) > 1

30
accession,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.
31

  
32
[1] Using the following query:
33
-----
34
SELECT herbarium, accession, count(*)
35
FROM ""UNCC"".""Specimen""
36
GROUP BY herbarium, accession
37
HAVING count(*) > 1
38 38
-----"
39 39
collectno,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
40 40
cultivated,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/else/_alt/2",Ignore other values
......
55 55
fruit,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/reproductivecondition/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"
56 56
leaves,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/reproductivecondition/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"
57 57
root,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/reproductivecondition/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"
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accession,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.

59

  
60
[1] Using the following query:

61
-----

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SELECT herbarium, accession, count(*)

63
FROM ""UNCC"".""Specimen""

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GROUP BY herbarium, accession

65
HAVING count(*) > 1

58
accession,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.
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60
[1] Using the following query:
61
-----
62
SELECT herbarium, accession, count(*)
63
FROM ""UNCC"".""Specimen""
64
GROUP BY herbarium, accession
65
HAVING count(*) > 1
66 66
-----"
67 67
collectno,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/else",
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accession,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.

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[1] Using the following query:

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-----

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SELECT herbarium, accession, count(*)

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FROM ""UNCC"".""Specimen""

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GROUP BY herbarium, accession

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HAVING count(*) > 1

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accession,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.
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[1] Using the following query:
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-----
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SELECT herbarium, accession, count(*)
73
FROM ""UNCC"".""Specimen""
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GROUP BY herbarium, accession
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HAVING count(*) > 1
76 76
-----"
77 77
herbarium,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/name/_first/1/_map:[UNCCD=UNCC,*=*]/value","""The name or acronym in use by the institution that donated the collection"" (https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode). UNCCD likely = UNCC database."
78 78
herbarium,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/sourcename/name/_first/1/_map:[UNCCD=UNCC,*=*]/value","""The name or acronym in use by the institution that donated the collection"" (https://projects.nceas.ucsb.edu/nceas/attachments/download/593/UNCC-validation-Peet.xlsx#institutionCode). UNCCD likely = UNCC database."
......
110 110
SciName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonname,
111 111
usdaRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/verbatimrank/_alt/1,
112 112
infrarank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/verbatimrank/_alt/2,
113
accession,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.

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[1] Using the following query:

116
-----

117
SELECT herbarium, accession, count(*)

118
FROM ""UNCC"".""Specimen""

119
GROUP BY herbarium, accession

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HAVING count(*) > 1

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accession,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then","Globally unique, although occasionally duplicated. [1] Bob says this is actually the catalogNumber.
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[1] Using the following query:
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-----
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SELECT herbarium, accession, count(*)
118
FROM ""UNCC"".""Specimen""
119
GROUP BY herbarium, accession
120
HAVING count(*) > 1
121 121
-----"
122 122
collectno,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then",
123 123
locality,/location/locationnarrative/_merge/1,

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