Project

General

Profile

1
"DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list/",VegBIEN:/specimenreplicate,Comments,Order
2
coordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationaccuracy,,89
3
country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
4
stateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
5
county,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination(/*_id/namedplace[placesystem=county])/placename,,66
6
locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/*_id/namedplace/placedescription/_alt/1,,68
7
verbatimLocality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationdetermination/*_id/namedplace/placedescription/_alt/2,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
8
decimalLatitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallatitude/_alt/1,,85
9
verbatimLatitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallatitude/_alt/2,,81
10
decimalLongitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallongitude/_alt/1,,86
11
verbatimLongitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallongitude/_alt/2,,82
12
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
13
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
14
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
15
eventDate/_alt/1/_*/date,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/1/_*/date,,44
16
eventDate/_alt/2/_date/day,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/day,,44
17
eventDate/_alt/2/_date/month,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/month,,44
18
eventDate/_alt/2/_date/year,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/year,,44
19
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
20
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
21
habitat,"/*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=habitat]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
22
bien.plantFungusDescription,"/*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=plantFungusDescription]]:[@fkey=tableRecord_ID]/definedvalue",,
23
sex,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
24
dateIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate",,120
25
dateIdentified/_alt/1/_*/date,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_alt/1/_*/date",,120
26
dateIdentified/_alt/2/_date/day,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_alt/2/_date/day",,120
27
dateIdentified/_alt/2/_date/month,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_alt/2/_date/month",,120
28
dateIdentified/_alt/2/_date/year,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_alt/2/_date/year",,120
29
identifiedBy,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
30
scientificName,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_alt/1","Brad: Bob, Nick, please is this mapping OK?",134
31
scientificNameAuthorship,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
32
class,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,144
33
family,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,146
34
genus,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,147
35
kingdom,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,142
36
order,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,145
37
specificEpithet,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,149
38
phylum,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,143
39
infraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,150
40
fieldNotes,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=notes]]:[@fkey=tableRecord_ID]/definedvalue","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes",54
41
occurrenceID,"/{:[*_id/reference]/sourceaccessioncode,*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/authorplantcode}","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
42
catalogNumber,:[*_id/reference]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
43
recordNumber,:[*_id/reference]/collectionnumber/_alt/1,,22
44
collectionID,:[*_id/reference]/collectionnumber/_alt/2,,9
45
fieldNumber,:[*_id/reference]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
46
recordedBy,:[*_id/reference]/verbatimcollectorname,,23
47
institutionCode,:[*_id/reference]/{museum_id/party/organizationname/_name/first},,11
48
collectionCode,":[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
49
acceptedNameUsage,,,135
50
acceptedNameUsageID,,,128
51
associatedMedia,,,36
52
associatedOccurrences,,,38
53
associatedReferences,,,37
54
associatedSequences,,,39
55
associatedTaxa,,,40
56
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
57
bed,,,117
58
behavior,,,29
59
continent,,Brad: OMIT,59
60
coordinateUncertaintyInMeters,,,88
61
countryCode,,,64
62
dataGeneralizations,,,17
63
datasetID,,,10
64
datasetName,,,13
65
day,,Brad: OMIT,50
66
dcterms:accessRights,,,5
67
dcterms:bibliographicCitation,,,6
68
dcterms:language,,,2
69
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
70
dcterms:references,,,7
71
dcterms:rights,,,3
72
dcterms:rightsHolder,,,4
73
dcterms:type,,,0
74
disposition,,,33
75
dynamicProperties,,,18
76
earliestAgeOrLowestStage,,,109
77
earliestEonOrLowestEonothem,,,101
78
earliestEpochOrLowestSeries,,,107
79
earliestEraOrLowestErathem,,,103
80
earliestPeriodOrLowestSystem,,,105
81
endDayOfYear,,,47
82
establishmentMeans,,,30
83
eventID,,,41
84
eventRemarks,,,55
85
eventTime,,Brad: OMIT,45
86
footprintSRS,,,92
87
footprintSpatialFit,,,93
88
footprintWKT,,,91
89
formation,,,115
90
geodeticDatum,,,87
91
geologicalContextID,,,100
92
georeferenceProtocol,,,96
93
georeferenceRemarks,,,99
94
georeferenceSources,,,97
95
georeferenceVerificationStatus,,,98
96
georeferencedBy,,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
97
georeferencedDate,,,95
98
group,,,114
99
higherClassification,,,141
100
higherGeography,,,58
101
higherGeographyID,,,57
102
highestBiostratigraphicZone,,,112
103
identificationID,,,118
104
identificationQualifier,,,124
105
identificationReferences,,,121
106
identificationRemarks,,,123
107
identificationVerificationStatus,,,122
108
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
109
individualID,,"Brad: OMIT; db-specific element, not relevant to VB/VX",24
110
informationWithheld,,,16
111
institutionID,,,8
112
island,,,62
113
islandGroup,,,61
114
latestAgeOrHighestStage,,,110
115
latestEonOrHighestEonothem,,,102
116
latestEpochOrHighestSeries,,,108
117
latestEraOrHighestErathem,,,104
118
latestPeriodOrHighestSystem,,,106
119
lifeStage,,,27
120
lithostratigraphicTerms,,,113
121
locationAccordingTo,,,78
122
locationID,,,56
123
locationRemarks,,,79
124
lowestBiostratigraphicZone,,,111
125
maximumDistanceAboveSurfaceInMeters,,,77
126
measurementAccuracy,,,169
127
measurementDeterminedBy,,,172
128
measurementDeterminedDate,,,171
129
measurementID,,,166
130
measurementMethod,,,173
131
measurementRemarks,,,174
132
measurementType,,,167
133
measurementUnit,,,170
134
measurementValue,,,168
135
member,,,116
136
minimumDistanceAboveSurfaceInMeters,,,76
137
month,,,49
138
municipality,,,67
139
nameAccordingTo,,,138
140
nameAccordingToID,,,131
141
namePublishedIn,,,139
142
namePublishedInID,,,132
143
namePublishedInYear,,,140
144
nomenclaturalCode,,,155
145
nomenclaturalStatus,,,157
146
occurrenceRemarks,,,21
147
occurrenceStatus,,,31
148
originalNameUsage,,,137
149
originalNameUsageID,,,130
150
otherCatalogNumbers,,,34
151
ownerInstitutionCode,,,14
152
parentNameUsage,,,136
153
parentNameUsageID,,,129
154
pointRadiusSpatialFit,,,90
155
preparations,,Brad: OMIT,32
156
previousIdentifications,,Brad: OMIT,35
157
relatedResourceID,,Brad: OMIT,161
158
relationshipAccordingTo,,,163
159
relationshipEstablishedDate,,,164
160
relationshipOfResource,,Brad: OMIT,162
161
relationshipRemarks,,,165
162
reproductiveCondition,,,28
163
resourceID,,,160
164
resourceRelationshipID,,,159
165
samplingEffort,,,43
166
samplingProtocol,,,42
167
scientificNameID,,,127
168
startDayOfYear,,,46
169
subgenus,,,148
170
taxonConceptID,,,133
171
taxonID,,,126
172
taxonRank,,,151
173
taxonRemarks,,,158
174
taxonomicStatus,,,156
175
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
176
verbatimCoordinateSystem,,,83
177
verbatimCoordinates,,,80
178
verbatimDepth,,,73
179
verbatimElevation,,,70
180
verbatimEventDate,,,51
181
verbatimSRS,,,84
182
verbatimTaxonRank,,,152
183
vernacularName,,,154
184
waterBody,,,60
185
year,,,48
(3-3/9)