initial commit, assessment part3 to combine all outputs

fixing issues related to shapefiles

adding figures 8 related to summary of accuracy

figures listing in script assessment part2

modifying assessment script part2 figures creation

stage 6 master script using modified figure assessment script2

more changes to part3 assessment overall figure combined assessment

debugging of figures and adding figure 9 to produce yearly comparison of RMSE

initial commit assessment part3 to combine yearly results into figures for presentation

part2 assessment figure production, for testing on bridge

more changes to part2 assessment figure 2 production to clean up and record figures produced

part2 assessment figure production debugging of errors related to shapefiles and lattice

part2 assessment figure production tested and debugged on bridge

more changes to python stage 4 script to make it work for stage 6

initial commit of python script from Alberto modified for stage6

running 2009 to 2014 region 4, stage 6 on bridge for testing

master script stage 6, minor bug for shell call

stage6 testing assessment part2 figures and call from the shell

initial commit for stage 7, mosaicing of predictions and accuracy layers productions

master script stage 6 testing assessment with figures

adding sourcing of relevant script for stage 6 assessment and debugging

master script stage 6 assessment, call to assessment function

master script stage 6, adding and removing relevant and irrelevant parameters

initial commit stage 6 assessement of run automated

master script stage 2_3 changes in query to avoid duplication of climatology database queries

initial commit from stage 2_3 master script from Alberto

master script stage 4_5 changes to take into account climatology step existence and modifcations in storage

master script stage 4_5 from Alberto, initial commit

slidify presentation using input assessment figure table from stage 6

scaling up assessment function script part1 slight changes to mosacing

assessment part1 call to figure plot assessment debug for shapefiles not read in

integrating plotting call into assessement part1

plotting figures assessment debugging and checking output table

plotting assessment figure function, collecting output figures into table

assessment part2 plotting of figures checking input parameters and clean up

clean up of assessment figure plotting called from part1

assessment part2 plotting of figures into function callable from stage 6

debugging of function assessment and adding part2 call to make figures

assessment function stage 6, clean up and collecting outputs in assessemnt table

assessment part1a debugging of missing parameter

transforming part1a assessment into a function for call from stage 6: initial changes

splitting assessment and removing copy back to NCEAS

raster prediction stage 4 modifying and debugging to avoid duplication of climatology step

raster prediction stage modification of gam fusion script to take into acccount the existence of climatology layers

database preparation function stage2 and 3, modifications to avoid multiple queries for climatologies by tile to speed up production

assessment part1, clean up before splitting of function in part1a for automation process for stage 6

assessment part1 adding extraction of daily stations for later analyses and mosacing

assessment of global run adding extraction of stations information for training and testing

assessment part 1 prediction 1992 for reg23

clean up of function mosaicing main function callable from stage 7

modifying main mosaicing script for call from shell and stage 7 on NEX

editing script of main mosaicing for function call with parameters

clean up of mosaicing main script and more testing for kriging of residuals at stations

adding functions for residuals kriging options and clean up function mosaicing script

producing residuals kriged surface for testing using training data

adding residuals calls to function for kriging of residuals and clean up of main mosaicing script

testing code on NEX for accuracy metrics kriging of resiudals and gdalmerge modified script

mosaicing script adding functions relevant to accuracy and residuals surface kriging

more modifications for mosaicing of functions for residuals, test for several days

testing accuracy function in the main script with data_s and data_v, training and testing

testing autokrige function for residuals of stations

modifying function script to add kriging function for residuals of predictions at stations

adding option to create residuals surface from stations using kriging

slight changes to mosaicing script to account for added parameters and testing

debugging of accuracy metric function from tile

adding accuracy metric function to main script and testing

mosaicing function adding function to produce accuracy metric surface from tile RMSE

testing extent macthing option for region 4

adding extent option to main global mosaicing script

modifying python merge mosaicing option

adding match extent option to mosaicing

testing removal of matching for python part of script

wrapper function for python option in mosaicing files

mosaicing function adding python and R options to mosaicFile

testing plotting of mosaics

testing modification to mosaicing functions on 5 days

testing mosaicing code with python option on NEX

debugging code for mosacing with new options and plot screen function

testing python option on NEX

adding python script option from gdal modified merged Alberto

testing mask and python path on Atlas

adding mask option debugging

function mosaicing adding mask and path to python/gdal binaries

testing code on NEX with python mosaicing script from Alberto

more modifications to mosaicing function

script mosaicing function, adding raster accuracy metric funtion

running mosaicing script for accuracy metric mosaic, clean up

testing accuracy metric function and mosaic

creating function to produce accuracy metric raster for eact tile

modifications for RMSE mosaicking first changes

checking mosaicing script for South America 1992 predictions

running assessment part2 South America

running assessment part1 for South America 1992, major changes in code

presentation slidify for 1982 first modifications

global assessment part2 script moved m functions to script

assessment part2 splitting functions into new script

modifying and removing plot screen mosaic functions that carashed atlas

assessment part2 1982 reg5 test

assessment scaling up part1 reg5 1982 tmax

adding barplot of predicted days for Africa 1992 assessment