Activity
From 02/05/2012 to 03/05/2012
03/05/2012
03/02/2012
- 02:01 PM Task #366: refactor VegX
- See [[VegX]] schema
- 02:00 PM Task #370 (Resolved): create ERD of final schema
- Ready for sign off on first draft
- 01:59 PM Task #374 (Resolved): mechanism to export VegBIEN data to flat file
- 01:58 PM Task #373 (Resolved): map all specimens data in raw_data
- 01:58 PM Task #372 (Resolved): talk to Nick about proposed changes to VegX
- 01:58 PM Task #371 (Resolved): formalize proposed changes to VegX
02/28/2012
- 04:46 PM Task #348: 1st draft of schema
- Waiting for confirmation from Bob Peet
- 04:44 PM Task #353 (Resolved): add terms from previous versions of DwC to DwC-BIEN
- @mappings/DwC-VegBIEN.specimens.csv@ now contains duplicate mappings for DwC1 terms, which are automatically added fr...
- 04:43 PM Task #367 (Resolved): get Univ of Arizona DwC data
- See @vegbiendev:/home/bien/svn/inputs/UArizona-CSV/src/ARIZ_DiGIR_21012010.csv.tar.gz@
02/24/2012
- 02:08 PM Task #330 (Rejected): DwC extension to VegX
- We're mapping DwC data separately from VegX
- 02:07 PM Task #370 (Resolved): create ERD of final schema
- See [[VegBIEN schema]] > Proposed changes for remaining changes
- 02:06 PM Task #369 (Resolved): get CTFS data dictionary
- 02:06 PM Task #368 (Rejected): get TEAM VegX data
- 02:06 PM Task #367 (Resolved): get Univ of Arizona DwC data
- 02:05 PM Task #366 (Rejected): refactor VegX
- 02:04 PM Task #365 (Rejected): retrieve taxonomic hierarchy in analytical layer by using dynamic queries to external sources
02/21/2012
- 01:09 PM Task #351 (Resolved): list of fields and method attributes needed to know whether can combine data from different plots
- 01:08 PM Task #350 (Resolved): implement methods in VegBIEN
- 01:08 PM Task #352 (Resolved): create way to represent methods hierarchically in schema
- 01:08 PM Task #358 (Resolved): make shortlist of 1st-level fields a method should have
02/13/2012
- 10:40 AM Task #358: make shortlist of 1st-level fields a method should have
- e-mail from Brad on 2012-2-1:
* plot shape: rectangle, circle, line
* area sampled: e.g. 1.0 ha
* plot x: e.g. 100 m...
02/10/2012
- 06:03 PM Task #346: add georeferencing support to schema
- We will add a separate locationdetermination for the GNRS-validated place, with calculated set to true.
- 06:01 PM Task #355 (Resolved): implement morphospecies using a scoped plantconcept
- 02:40 PM Task #355 (Resolved): implement morphospecies using a scoped plantconcept
- 06:01 PM Task #356 (Resolved): support subplot events that link to parent plot events
- 02:41 PM Task #356 (Resolved): support subplot events that link to parent plot events
- 02:43 PM Task #357 (Rejected): make shortlist of 1st-level fields a method should have
- duplicate of #358
- 02:42 PM Task #357 (Rejected): make shortlist of 1st-level fields a method should have
- (Brad and Mike)
* area, size, etc.
* see example plot methods on nimoy in @/home/bien_shared/methodology/plotMeth... - 02:42 PM Task #358 (Resolved): make shortlist of 1st-level fields a method should have
- (Brad and Mike)
* area, size, etc.
* see example plot methods on nimoy in @/home/bien_shared/methodology/plotMeth...
02/09/2012
- 06:27 PM Task #352: create way to represent methods hierarchically in schema
- I added a basic plotmethod table. What hierarchical information do we want to add?
- 06:26 PM Task #350: implement methods in VegBIEN
- I added a basic plotmethod table
- 05:42 PM Task #348: 1st draft of schema
- e-mail from Martha Narro on 2012-2-9:
* 1:1 constraint on taxonOccurrence has been dropped, so that topic is final... - 05:40 PM Task #345: integrate GNRS into VegBIEN
- See "iPlant Geospatial Roadmap":https://pods.iplantcollaborative.org/wiki/display/SOT/Geospatial+Roadmap+%28revised%2...
- 05:36 PM Task #346: add georeferencing support to schema
- "DwC georeferencing fields":http://code.google.com/p/darwincore/wiki/Location#Georeference_Terms:
* decimalLatitude
... - 05:34 PM Task #296 (Resolved): Direct mapping from native salvias_plots MySQL database to VegBIEN
- SALVIAS stems have been mapped. Mappings are in SVN under "@inputs/SALVIAS/maps@":https://projects.nceas.ucsb.edu/nce...
- 05:31 PM Task #304: Complete full dataset imports to VegBIEN via VegX of NYBG and SALVIAS
- First full NYBG load is complete, with 0.12% error rate. Full stats under [[Benchmarking]].
- 05:30 PM Task #313 (Resolved): Import full NYBG data
- First full NYBG load is complete, with 0.12% error rate. Full stats under [[Benchmarking]].
- 05:29 PM Task #323 (Resolved): map NYBG data
- First full NYBG load is complete, with 0.12% error rate. Full stats under [[Benchmarking]].
- 05:28 PM Task #342 (Resolved): make DwC_BIEN schema
- [[DwC schema]] has a list of fields in DwC-BIEN, mappings from different versions of DwC, and mappings to VegBIEN
02/06/2012
- 10:25 AM Task #317: Direct mapping from VegX to VegBIEN
- Mappings have been made for SALVIAS VegX fields
- 10:23 AM Task #333: add traits table to VegBIEN
- VegBank had an existing trait table, which was not included in the ERD. We can modify that table for our needs.
- 10:23 AM Task #332: switch to VegX 1.5.3
- VegX 1.5.3 is available, so we're switching to that instead
- 10:22 AM Task #313: Import full NYBG data
- Almost done with the first full load of the NYBG data. Currently takes 2 days.
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