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# Tracker Status Priority Subject Assignee Updated
947 Task New Normal have all scripts that replace DB items rename the existing item out of the way rather than dropping it Aaron Marcuse-Kubitza 10/03/2014 03:17 PM Actions
946 Task New Normal update the column names in the VegBIEN example queries to reflect Brian M's renamings Aaron Marcuse-Kubitza 04/28/2017 04:34 AM Actions
938 Task New Normal Enquist's taxon validation Aaron Marcuse-Kubitza 06/25/2014 01:19 PM Actions
937 Task New Normal fix missing date fields Aaron Marcuse-Kubitza 10/03/2014 03:18 PM Actions
932 Task New Normal Discovering BIEN data through iPlant Brian Enquist 05/22/2014 04:43 PM Actions
931 Task New Normal BIEN db at iPlant Martha Narro 05/22/2014 04:32 PM Actions
929 Task New Normal change TNRS client to store metadata Aaron Marcuse-Kubitza 06/26/2014 05:24 PM Actions
927 Task Resolved Normal move morphospecies name formation to normalized DB Aaron Marcuse-Kubitza 05/27/2014 09:24 PM Actions
917 Task New Normal TNRS: Instructions for new version with TPL Aaron Marcuse-Kubitza 04/28/2017 04:38 AM Actions
915 Task New Normal Taxon Name Validation Aaron Marcuse-Kubitza 04/28/2017 04:21 AM Actions
909 Task New Normal in aggregating validations pipeline, support using input result sets from CSVs instead of only by querying the staging tables Aaron Marcuse-Kubitza 05/03/2014 05:30 PM Actions
908 Task New Normal generate the source-general derived columns directly on the denormalized staging table Aaron Marcuse-Kubitza 04/28/2017 04:39 AM Actions
904 Task Resolved Normal add MySQL public user to allow accessing the normalized VegCore data dictionary Aaron Marcuse-Kubitza 04/28/2017 04:40 AM Actions
902 Task Resolved Normal fix bug that causes joining on the wrong columns in the import Aaron Marcuse-Kubitza 04/28/2017 04:39 AM Actions
901 Task New Normal schedule regular pg_dump backups of the DB Aaron Marcuse-Kubitza 04/23/2014 03:16 PM Actions
899 Task New Normal remove dependencies on Mac Aaron Marcuse-Kubitza 04/16/2014 10:14 PM Actions
887 Task Rejected Normal fix disk space leak that fills the disk and crashes the import Aaron Marcuse-Kubitza 04/28/2017 04:39 AM Actions
883 Task Rejected Normal have import scripts regularly check disk space and pause processes if getting close to limit Aaron Marcuse-Kubitza 10/03/2014 03:21 PM Actions
878 Task New Normal fix crow's foot notation in ERD Aaron Marcuse-Kubitza 04/16/2014 10:16 PM Actions
871 Task New Normal grant bien_read access to validation result tables Aaron Marcuse-Kubitza 02/23/2014 08:03 PM Actions
870 Task New Normal grant bien_read access to publishable staging tables Aaron Marcuse-Kubitza 02/23/2014 08:02 PM Actions
859 Task New Normal fix slowness in _taxonlabel_set_parent_id() Aaron Marcuse-Kubitza 01/20/2014 09:14 PM Actions
857 Task New Normal standardize taxon ranks to a common vocabulary Aaron Marcuse-Kubitza 01/16/2014 10:40 AM Actions
856 Task New Normal data provider feedback tables: include the individual records that have errors Aaron Marcuse-Kubitza 01/16/2014 10:42 AM Actions
816 Task New Normal re-run TNRS on mis-scrubbed names Aaron Marcuse-Kubitza 01/09/2014 09:44 AM Actions
815 Task New Normal auto-prepend table name to columns Aaron Marcuse-Kubitza 11/08/2013 10:10 PM Actions
636 Task New Normal support TNRS-matching names in "", insted of encoding them and letting TNRS return no match Aaron Marcuse-Kubitza 04/28/2017 05:13 AM Actions
584 Task Resolved Normal enable running all the import steps from one runscript Aaron Marcuse-Kubitza 03/18/2014 03:07 AM Actions
581 Task New Normal mechanism to dynamically autopopulate NOT NULL values Aaron Marcuse-Kubitza 03/06/2013 10:57 PM Actions
580 Task New Normal automap each word *in* a VegCore term instead of just the whole term Aaron Marcuse-Kubitza 03/06/2013 09:08 PM Actions
579 Task New Normal in sql_gen.EnsureNotNull, use ARRAY[] instead of COALESCE() to wrap values where NULL should be compared literally Aaron Marcuse-Kubitza 03/06/2013 08:45 PM Actions
578 Task New Normal replace all fields of type text with a domain type that ensures the value is non-empty (not '') Aaron Marcuse-Kubitza 03/06/2013 02:08 PM Actions
577 Task Rejected Normal use views instead of map spreadsheets to store the datasource mappings Aaron Marcuse-Kubitza 03/18/2014 03:10 AM Actions
576 Task New Normal merge the datasources' mappings into the VegCore data dictionary Aaron Marcuse-Kubitza 03/05/2013 05:09 AM Actions
575 Task New Normal put all wiki attachments in svn Aaron Marcuse-Kubitza 10/03/2013 12:56 PM Actions
574 Task New Normal mechanism to manually override the CSV dialect, encoding, etc. Aaron Marcuse-Kubitza 02/26/2013 12:48 PM Actions
573 Task New Normal automap the analytical DB columns Aaron Marcuse-Kubitza 03/05/2013 09:41 PM Actions
566 Task New Normal automatically adjust staging tables for easier mapping Aaron Marcuse-Kubitza 02/14/2013 11:04 AM Actions
565 Task Resolved Normal partition the TaxonDetermination table by row into the different types of determinations Aaron Marcuse-Kubitza 04/13/2013 08:56 AM Actions
564 Task New Normal make all VegBIEN column names globally unique Aaron Marcuse-Kubitza 03/09/2013 02:10 AM Actions
563 Task New Normal refactor VegBIEN to use VegCore terms Aaron Marcuse-Kubitza 02/14/2013 06:33 AM Actions
562 Task New Normal flatten the mappings Aaron Marcuse-Kubitza 03/28/2014 03:05 AM Actions
561 Task New Normal make VegBIEN ID fields plain-text instead of numeric Aaron Marcuse-Kubitza 12/03/2013 05:54 AM Actions
560 Task New Normal move VegCore data dictionary to a phpPgAdmin-accessible database Aaron Marcuse-Kubitza 10/03/2013 01:00 PM Actions
549 Task Resolved Normal add covering indexes on fkeys Aaron Marcuse-Kubitza 01/04/2013 09:15 PM Actions
548 Task New Normal remove benign errors from the data provider feedback tables Aaron Marcuse-Kubitza 12/20/2012 02:36 PM Actions
544 Task New Normal integrate creation of analytical DB into automated testing Aaron Marcuse-Kubitza 10/03/2013 01:00 PM Actions
539 Task Rejected Normal get analytical_stem_view to use merge joins instead of hash joins Aaron Marcuse-Kubitza 03/28/2014 02:55 AM Actions
522 Task New Normal fix deadlock when multiple testers are running simultaneously Aaron Marcuse-Kubitza 10/12/2012 01:06 AM Actions
521 Task Resolved Normal make place* tables use a structure similar to taxonconcept Aaron Marcuse-Kubitza 11/08/2012 03:07 AM Actions
501 Task Resolved Normal find out which datasources won't allow their data to be publicly accessible Aaron Marcuse-Kubitza 02/23/2014 07:57 PM Actions
500 Task New Normal when lower rank has name concatenated together, use lowest rank as the scientific name Aaron Marcuse-Kubitza 09/24/2012 01:02 PM Actions
499 Task Resolved Normal map example terms into the taxonomic schema Aaron Marcuse-Kubitza 10/08/2012 07:15 PM Actions
498 Task Resolved Normal add definitions to columns in "green tables" Aaron Marcuse-Kubitza 10/12/2012 05:01 AM Actions
497 Task Resolved Normal create examples of taxonomic names to test the limits of the new taxonomic schema Brad Boyle 10/17/2012 12:02 PM Actions
495 Task Resolved Normal add separate datasource table rather than using party for this Aaron Marcuse-Kubitza 11/08/2012 03:11 AM Actions
494 Task Resolved Normal add indexes for the analytical_db_view joins Aaron Marcuse-Kubitza 09/18/2012 05:14 PM Actions
490 Task New Normal change import.stats.xls to use field rather than row count Aaron Marcuse-Kubitza 09/10/2012 06:55 PM Actions
486 Task New Normal add unit-conversion mechanism Aaron Marcuse-Kubitza 10/08/2012 07:16 PM Actions
485 Task New Normal track data provider's citation requirements in VegBIEN Aaron Marcuse-Kubitza 04/10/2014 03:19 AM Actions
484 Task Resolved Normal support installing staging tables directly from a MySQL export Aaron Marcuse-Kubitza 09/05/2012 08:26 AM Actions
483 Task Resolved Normal rename staging table columns according to map.csv Aaron Marcuse-Kubitza 09/10/2014 03:56 PM Actions
482 Task New Normal translate README.TXT to wiki page Aaron Marcuse-Kubitza 10/03/2013 01:01 PM Actions
480 Task Resolved Normal automate adding a new table to an existing datasource Aaron Marcuse-Kubitza 08/27/2012 05:51 PM Actions
477 Task Rejected Normal allow putting specimens data directly in the top level of the datasource directory Aaron Marcuse-Kubitza 12/06/2012 08:13 PM Actions
476 Task New Normal develop map spreadsheet -> header override file translation utility Aaron Marcuse-Kubitza 09/10/2014 03:58 PM Actions
474 Task Rejected Normal use svn to figure out when a map file has changed and needs to be cleaned up Aaron Marcuse-Kubitza 12/06/2012 08:21 PM Actions
473 Task Resolved Normal use _merge instead of _alt to avoid losing source data on import Aaron Marcuse-Kubitza 08/15/2012 07:49 AM Actions
472 Task Rejected Normal replace accessioncodes with datasource_id+sourceaccessioncode Aaron Marcuse-Kubitza 02/14/2013 07:18 AM Actions
471 Task Resolved Normal add make actions so new dependent maps are rebuilt automatically when their source map changes Aaron Marcuse-Kubitza 08/28/2012 06:30 PM Actions
470 Task Resolved Normal source terms from old versions of DwC to the DwC history page Aaron Marcuse-Kubitza 02/14/2013 07:19 AM Actions
469 Task New Normal give everyone their own account on vegbien Aaron Marcuse-Kubitza 08/27/2012 05:52 PM Actions
468 Task Resolved Normal rename/delete and recreate public schema in one transaction Aaron Marcuse-Kubitza 03/05/2013 05:07 AM Actions
467 Task New Normal underline all to do items in meetings notes Aaron Marcuse-Kubitza 10/03/2013 01:02 PM Actions
466 Task Rejected Normal column-based import: avoid most exceptions by introspecting the DB structure instead of waiting for a parseable exception to be raised Aaron Marcuse-Kubitza 10/03/2013 01:03 PM Actions
465 Task New Normal move issue tracker comments to wiki pages to ensure version history Aaron Marcuse-Kubitza 10/03/2013 01:03 PM Actions
464 Task Resolved Normal reverse XPaths so that they start with location instead of plantobservation or specimenreplicate Aaron Marcuse-Kubitza 08/28/2012 06:31 PM Actions
463 Task Resolved Normal allow an input to appear multiple times in the same map spreadsheet Aaron Marcuse-Kubitza 08/03/2012 06:38 PM Actions
462 Task Resolved Normal name backups according to svn revision instead of or in addition to the date Aaron Marcuse-Kubitza 10/12/2012 04:56 AM Actions
461 Task New Normal don't display warning when nullable boolean columns are handled without using COALESCE() Aaron Marcuse-Kubitza 08/01/2012 06:57 AM Actions
459 Task New Normal data provider feedback: propagate srcs (input columns for an intermediate column) for all tables, not just SQL functions? Aaron Marcuse-Kubitza 07/30/2012 07:49 PM Actions
458 Task Resolved Normal map all VegX sources to stems table Aaron Marcuse-Kubitza 08/28/2012 06:29 PM Actions
457 Task New Normal use driver-native autocommit mode instead of our custom autocommit implementation Aaron Marcuse-Kubitza 07/30/2012 07:19 PM Actions
456 Task New Normal test that querying the DB uses the unique indexes instead of a seq scan Aaron Marcuse-Kubitza 07/30/2012 07:07 PM Actions
455 Task Resolved Normal change summarizing queries to use vegbien staging tables Aaron Marcuse-Kubitza 09/17/2012 07:01 AM Actions
454 Task Resolved Normal update summarizing queries for current schema Aaron Marcuse-Kubitza 11/08/2012 03:22 AM Actions
453 Task New Normal cluster vegbien tables periodically Aaron Marcuse-Kubitza 07/30/2012 06:50 PM Actions
452 Task Resolved Normal add column-based import to automated testing Aaron Marcuse-Kubitza 08/28/2012 06:28 PM Actions
451 Task New Normal verify database contents as part of automated testing Aaron Marcuse-Kubitza 07/30/2012 06:25 PM Actions
450 Task New Normal cast all untyped literals as text using cast_literal() Aaron Marcuse-Kubitza 07/30/2012 04:24 PM Actions
449 Task New Normal optimize JOINs on existing rows Aaron Marcuse-Kubitza 07/30/2012 04:15 PM Actions
448 Task New Normal timeout ANALYZE queries Aaron Marcuse-Kubitza 07/30/2012 04:15 PM Actions
446 Task New Normal fix deadlock in INSERT IGNORE replacement Aaron Marcuse-Kubitza 02/23/2014 08:01 PM Actions
444 Task Resolved Normal test backing up entire DB Aaron Marcuse-Kubitza 07/17/2012 03:39 PM Actions
443 Task Resolved Normal back up staging tables Aaron Marcuse-Kubitza 07/17/2012 03:58 PM Actions
442 Task Resolved Normal test restoring of import backups Aaron Marcuse-Kubitza 07/17/2012 03:51 PM Actions
441 Task Resolved Normal import CTFS data using JOINs from DB export, not VegX Aaron Marcuse-Kubitza 09/17/2012 06:59 AM Actions
440 Task New Normal aggregating validations of imports Aaron Marcuse-Kubitza 03/28/2014 02:53 AM Actions
427 Task Resolved Normal Load all plots data Aaron Marcuse-Kubitza 09/17/2012 07:07 AM Actions
426 Task Resolved Normal Reload DB using column-based import Aaron Marcuse-Kubitza 07/02/2012 12:03 PM Actions
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