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# Date Author Comment
13588 06/02/2014 04:08 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: tnrs_input_name: don't scrub accepted names, as using multiple matches per name no longer provides a single accepted name to scrub. instead, the Accepted_* fields can be whitespace-split to generate the same columns that would have been generated by the scrubbing (and without the overhead of the extra TNRS call).

13542 05/27/2014 10:38 PM Aaron Marcuse-Kubitza

schemas/public_.sql: added 2014-3-11.Jeff_Ott.climatic_range_determinants

13541 05/27/2014 10:17 PM Aaron Marcuse-Kubitza

schemas/public_.sql: analytical_stem_view: added scrubbed_taxon_name_with_author, needed by Jeff Ott's analysis (wiki.vegpath.org/Data_requests)

13539 05/27/2014 10:09 PM Aaron Marcuse-Kubitza

schemas/public_.sql: added scrubbed_specific_epithet, scrubbed_species_binomial, which are needed by Jeff Ott's analysis (wiki.vegpath.org/Data_requests)

13538 05/27/2014 10:08 PM Aaron Marcuse-Kubitza

fix: schemas/public_.sql: sync_analytical_stem_to_view(): removed fkey to source.shortname because this prevents reloading individual datasources

13536 05/27/2014 03:27 AM Aaron Marcuse-Kubitza

schemas/public_.sql: added scrubbed_specific_epithet, scrubbed_species_binomial, which are needed by Jeff Ott's analysis (wiki.vegpath.org/Data_requests)

13534 05/27/2014 12:33 AM Aaron Marcuse-Kubitza

schemas/public_.sql: analytical_stem_view: scrubbed_morphospecies_binomial: use new taxon_scrub.scrubbed_morphospecies_binomial

13522 05/23/2014 03:57 PM Aaron Marcuse-Kubitza

bugfix: schemas/public_.sql: _plots_20_tnrs_names: verbatim_name_with_author: use taxonverbatim.taxonomicname rather than taxonlabel.taxonomicname

13512 05/21/2014 05:50 PM Aaron Marcuse-Kubitza

fix: schemas/util.sql: force_recreate(): renamed to just recreate(), because "force" normally implies that things will be deleted, which this function does not do

13511 05/21/2014 05:49 PM Aaron Marcuse-Kubitza

fix: schemas/public_.sql: _plots_20_tnrs_names: fixed order of tnrs_taxonomic_status, tnrs_accepted_name_family

13510 05/21/2014 04:45 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: added tnrs_taxonomic_status, as requested in issue #915

13509 05/21/2014 04:34 PM Aaron Marcuse-Kubitza

schemas/public_.sql: analytical_stem_view: taxonomic_status: don't filter with map_taxonomic_status() anymore since this is now done by "TNRS"."MatchedTaxon"

13503 05/21/2014 04:13 AM Aaron Marcuse-Kubitza

bugfix: inputs/.TNRS/schema.sql: map_taxonomic_status(): need to use accepted name instead of scrubbed name (which also includes no-opinion names), as described at http://wiki.vegpath.org/2013-11-14_conference_call#taxonomic-fields. this used to be the accepted name, but got switched when the concatenated name was also used to store the matched name for no-opinion names.

13502 05/21/2014 01:50 AM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: use accepted_morphospecies_binomial, which is now available directly in the TNRS results, instead of just the morphospecies_suffix, as requested in issue #915

13442 05/13/2014 03:50 AM Aaron Marcuse-Kubitza

bugfix: schemas/public_.sql: plots_20_tnrs_names: tnrs_accepted*: use new accepted_*, not scrubbed_*, as scrubbed_* does not contain only the accepted name (as implied by the tnrs_accepted_* column name)

13440 05/13/2014 03:28 AM Aaron Marcuse-Kubitza

bugfix: schemas/public_.sql: _plots_20_tnrs_names: morphospeciesSuffix must still be called morphospecies_suffix, not taxon_morphospecies, because that column has not been updated to the taxon_morphospecies yet (fixes r13435)

13435 05/12/2014 04:28 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: changed to set of columns requested by Martha

13433 05/10/2014 09:17 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: added morphospecies suffix in order to also validate it

13432 05/10/2014 09:13 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_names: added verbatim name in order to also validate the formation of the concatenated name

13431 05/10/2014 08:49 PM Aaron Marcuse-Kubitza

schemas/public_.sql: merged _plots_20_tnrs_input_names, _plots_21_tnrs_output_names into _plots_20_tnrs_names so the input and output names can be compared side-by-side

13398 05/03/2014 01:37 AM Aaron Marcuse-Kubitza

schemas/public_.sql: _plots_20_tnrs_input_names, _plots_21_tnrs_output_names: added Brad's comments

13394 05/02/2014 11:34 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: _plots_21_tnrs_output_names: use scrubbed_unique_taxon_name (concatenated output name) because this is more similar to the concatenated name used in _plots_20_tnrs_input_names

13390 05/02/2014 10:01 PM Aaron Marcuse-Kubitza

bugfix: schemas/public_.sql: _plots_21_tnrs_output_names: need to use TNRS output rather than input name

13389 05/02/2014 09:54 PM Aaron Marcuse-Kubitza

schemas/public_.sql: added _plots_20_tnrs_input_names, _plots_21_tnrs_output_names

13388 05/02/2014 06:17 PM Aaron Marcuse-Kubitza

schemas/public_.sql: public_validations: schema comment: documented how to run just the output queries on a particular datasource

13387 05/02/2014 04:53 PM Aaron Marcuse-Kubitza

fix: schemas/public_.sql: rm_all_queries(): also remove output-only result tables

13386 05/02/2014 04:50 PM Aaron Marcuse-Kubitza

schemas/public_.sql: query_view_regexp(): also match auxiliary tables

13385 05/02/2014 04:14 PM Aaron Marcuse-Kubitza

schemas/public_.sql: added remake_output_tables(datasource_schema, prefix)

13383 05/01/2014 10:38 PM Aaron Marcuse-Kubitza

schemas/public_.sql: added output_queries(prefix)

13382 05/01/2014 10:27 PM Aaron Marcuse-Kubitza

schemas/public_.sql: validation_views(): added prefix param, which can be used for additional subsetting

13381 05/01/2014 10:13 PM Aaron Marcuse-Kubitza

schemas/public_.sql: query_relations(): removed no longer used max_prefix_len default param

13380 05/01/2014 10:05 PM Aaron Marcuse-Kubitza

schemas/public_.sql: query_relations(): use new public_validations.truncated_prefixed_name_regexp(), which does not require passing in a max_prefix_len

13379 05/01/2014 10:03 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: added public_validations.truncated_prefixed_name_regexp(), which does not require passing in a max_prefix_len

13378 05/01/2014 08:55 PM Aaron Marcuse-Kubitza

schemas/public_.sql: rm_output_queries(), validation_views(): use public_validations.query_view_regexp()

13377 05/01/2014 08:42 PM Aaron Marcuse-Kubitza

schemas/public_.sql: added public_validations.query_view_regexp()

13376 05/01/2014 08:06 PM Aaron Marcuse-Kubitza

bugfix: schemas/public_.sql: public_validations.rm_output_queries(): default regexp needs to be anchored at beginning of string, and should match the regexp in public_validations.validation_views()

13356 04/30/2014 05:36 PM Aaron Marcuse-Kubitza

schemas/public_.sql: _km_to_m(): made it a wrapper around util._km_to_m() so this function is only in one place

13154 04/17/2014 02:39 AM Aaron Marcuse-Kubitza

schemas/Makefile: vegbien.sql: also include geoscrub, TNRS schemas, as requested in the 2014-04-10 conference call (wiki.vegpath.org/2014-04-10_conference_call#VegBIEN-schema). this involves having a separate public_.sql file for restoring the public schema.