/ - Diff - BIEN 3 - NCEAS Projects

« Previous | Next »

Revision 10170

Added by Aaron Marcuse-Kubitza over 11 years ago

bugfix: inputs/*/Source/: use installed staging table (with blank-line data.csv) in order to also work with new-style import. this also fixes a benign diff between the by-row and by-col test outputs, where row-based import would not import the Source/ entries because there was not at least one row in the input. note that in order to ensure that all datasources are properly run, you need to check `svn st|sort` against the datasource schema names to see if any are missing.

inputs/BRIT/Source/data.csv
	1
	2

inputs/TEX/Source/data.csv
	1
	2

inputs/newWorld/Source/data.csv
	1
	2

inputs/HVAA/Source/header.csv
	1	row_num

inputs/HVAA/Source/data.csv
	1
	2

inputs/HVAA/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/MT/Source/header.csv
	1	row_num

inputs/MT/Source/data.csv
	1
	2

inputs/MT/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/test_taxonomic_names/Source/header.csv
	1	row_num

inputs/test_taxonomic_names/Source/data.csv
	1
	2

inputs/test_taxonomic_names/Source/test.xml.ref
15	15	</path>
16	16	</_setDefault>
17	17	</VegBIEN>
18		Inserted 0 new rows into database
	18	Inserted 1 new rows into database

inputs/XAL/Source/header.csv
	1	row_num

inputs/XAL/Source/data.csv
	1
	2

inputs/XAL/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/NCU/Source/header.csv
	1	row_num

inputs/NCU/Source/data.csv
	1
	2

inputs/NCU/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/bien2_traits/Source/header.csv
	1	row_num

inputs/bien2_traits/Source/data.csv
	1
	2

inputs/bien2_traits/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/TEAM/Source/header.csv
	1	row_num

inputs/TEAM/Source/data.csv
	1
	2

inputs/TEAM/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/.geoscrub/Source/header.csv
	1	row_num

inputs/.geoscrub/Source/data.csv
	1
	2

inputs/.geoscrub/Source/test.xml.ref
15	15	</path>
16	16	</_setDefault>
17	17	</VegBIEN>
18		Inserted 0 new rows into database
	18	Inserted 1 new rows into database

inputs/ACAD/Source/header.csv
	1	row_num

inputs/ACAD/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/WIN/Source/data.csv
	1
	2

inputs/CTFS/Source/header.csv
	1	row_num

inputs/CTFS/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/BRIT/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/TEX/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/newWorld/Source/test.xml.ref
15	15	</path>
16	16	</_setDefault>
17	17	</VegBIEN>
18		Inserted 0 new rows into database
	18	Inserted 1 new rows into database

inputs/ACAD/Source/data.csv
	1
	2

inputs/WIN/Source/header.csv
	1	row_num

inputs/WIN/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/CTFS/Source/data.csv
	1
	2

inputs/BRIT/Source/header.csv
	1	row_num

inputs/TEX/Source/header.csv
	1	row_num

inputs/newWorld/Source/header.csv
	1	row_num

inputs/U/Source/header.csv
	1	row_num

inputs/QFA/Source/data.csv
	1
	2

inputs/JBM/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/SpeciesLink/Source/header.csv
	1	row_num

inputs/HIBG/Source/data.csv
	1
	2

inputs/bien_web/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/SALVIAS/Source/data.csv
	1
	2

inputs/U/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/JBM/Source/header.csv
	1	row_num

inputs/UBC/Source/data.csv
	1
	2

inputs/SpeciesLink/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/bien_web/Source/header.csv
	1	row_num

inputs/NY/Source/data.csv
	1
	2

inputs/analytical_db/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/UNCC/Source/header.csv
	1	row_num

inputs/.herbaria/Source/data.csv
	1
	2

inputs/SALVIAS/Source/header.csv
	1	row_num

inputs/U/Source/data.csv
	1
	2

inputs/QFA/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/UBC/Source/header.csv
	1	row_num

inputs/SpeciesLink/Source/data.csv
	1
	2

inputs/HIBG/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/NY/Source/header.csv
	1	row_num

inputs/analytical_db/Source/data.csv
	1
	2

inputs/Madidi/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/.herbaria/Source/header.csv
	1	row_num

inputs/analytical_db/Source/header.csv
	1	row_num

inputs/Madidi/Source/data.csv
	1
	2

inputs/UNCC/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/CVS/Source/header.csv
	1	row_num

inputs/SALVIAS/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/QFA/Source/header.csv
	1	row_num

inputs/JBM/Source/data.csv
	1
	2

inputs/UBC/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/HIBG/Source/header.csv
	1	row_num

inputs/bien_web/Source/data.csv
	1
	2

inputs/NY/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/Madidi/Source/header.csv
	1	row_num

inputs/UNCC/Source/data.csv
	1
	2

inputs/.herbaria/Source/test.xml.ref
15	15	</path>
16	16	</_setDefault>
17	17	</VegBIEN>
18		Inserted 0 new rows into database
	18	Inserted 1 new rows into database

inputs/CVS/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/TurboVeg/Source/header.csv
	1	row_num

inputs/CVS/Source/data.csv
	1
	2

inputs/SALVIAS-CSV/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/REMIB/Source/data.csv
	1
	2

inputs/SALVIAS-CSV/Source/data.csv
	1
	2

inputs/REMIB/Source/header.csv
	1	row_num

inputs/SALVIAS-CSV/Source/header.csv
	1	row_num

inputs/TurboVeg/Source/data.csv
	1
	2

inputs/REMIB/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/.TNRS/Source/header.csv
	1	row_num

inputs/ARIZ/Source/data.csv
	1
	2

inputs/NVS/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/MO/Source/header.csv
	1	row_num

inputs/VASCAN/Source/data.csv
	1
	2

inputs/VegBank/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/IUCN/Source/header.csv
	1	row_num

inputs/.TNRS/Source/data.csv
	1
	2

inputs/ARIZ/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/TRT/Source/header.csv
	1	row_num

inputs/MO/Source/data.csv
	1
	2

inputs/VASCAN/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/TRTE/Source/header.csv
	1	row_num

inputs/IUCN/Source/data.csv
	1
	2

inputs/.TNRS/Source/test.xml.ref
15	15	</path>
16	16	</_setDefault>
17	17	</VegBIEN>
18		Inserted 0 new rows into database
	18	Inserted 1 new rows into database

inputs/NVS/Source/header.csv
	1	row_num

inputs/TRT/Source/data.csv
	1
	2

inputs/MO/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/VegBank/Source/header.csv
	1	row_num

inputs/TRTE/Source/data.csv
	1
	2

inputs/IUCN/Source/test.xml.ref
15	15	</path>
16	16	</_setDefault>
17	17	</VegBIEN>
18		Inserted 0 new rows into database
	18	Inserted 1 new rows into database

inputs/ARIZ/Source/header.csv
	1	row_num

inputs/NVS/Source/data.csv
	1
	2

inputs/TRT/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

inputs/VASCAN/Source/header.csv
	1	row_num

inputs/VegBank/Source/data.csv
	1
	2

inputs/TRTE/Source/test.xml.ref
16	16	</path>
17	17	</_setDefault>
18	18	</VegBIEN>
19		Inserted 0 new rows into database
	19	Inserted 1 new rows into database

Also available in: Unified diff

Project

General

Profile

Revision 10170

Added by Aaron Marcuse-Kubitza over 11 years ago