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aaronmk
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#!/bin/bash
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# Tests map
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aaronmk
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# Usage: env [debug=1] [n=<num-rows>] self
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aaronmk
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selfDir="$(dirname -- "$0")"
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cd "$selfDir"
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test -n "$n" || n=2
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let n++
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aaronmk
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in=NYSpecimenDataAmericas.csv
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out=NYSpecimenDataAmericas.xml
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aaronmk
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aaronmk
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head -"$n" "$in"|../map ../../mappings/NYBG-VegX.organisms.csv \
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>"test_output/$out" && diff "$out" "test_output/$out"
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100
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aaronmk
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test -z "$debug" && toVegbank=map2vegbank || toVegbank=map
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head -"$n" "$in"|"../$toVegbank" ../../mappings/joins/NYBG-VegBank.organisms.csv
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