Revision 10257
Added by Aaron Marcuse-Kubitza over 11 years ago
inputs/HIBG/Specimen/VegBIEN.csv | ||
---|---|---|
95 | 95 |
georeferenceVerificationStatus,,** No join mapping for georeferenceVerificationStatus ** |
96 | 96 |
identificationRemarks,,** No join mapping for identificationRemarks ** |
97 | 97 |
informationWithheld,,** No join mapping for informationWithheld ** |
98 |
institutionID,,** No non-empty join mapping for UNUSED ** |
|
98 |
institutionID,,** No non-empty join mapping for UNUSED#institutionID **
|
|
99 | 99 |
language,,** No join mapping for language ** |
100 | 100 |
modified,,** No join mapping for modified ** |
101 | 101 |
municipality,,** No join mapping for municipality ** |
inputs/bien_web/observation/new_terms.csv | ||
---|---|---|
9 | 9 |
isCultivated,cultivated,, |
10 | 10 |
isCultivatedReason,cultivatedBasis,, |
11 | 11 |
pctCover,coverPercent,, |
12 |
observationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
13 |
dataSourceID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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14 |
dataSourceName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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15 |
dataSourceNamePrimary_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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16 |
plotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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17 |
observationType_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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18 |
bien2_taxonomyID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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19 |
bien2_DBPlotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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20 |
bien2_ObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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21 |
bien2_OccurID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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22 |
taxonAuthorityVerbatim_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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23 |
higherPlantGroup_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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24 |
family_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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25 |
genus_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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26 |
species_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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27 |
taxon_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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28 |
taxonAuthor_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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29 |
taxonMorphospecies_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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30 |
rank_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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31 |
acceptance_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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32 |
country_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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33 |
stateProvince_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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34 |
collector_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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35 |
identifiedBy_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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36 |
plotCode_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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37 |
plotAreaHa_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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38 |
plotMinDbh_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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39 |
plotMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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40 |
isValidLatLong_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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41 |
isGeovalid_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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42 |
isNewWorld_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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43 |
isCultivated_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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44 |
isCultivatedReason_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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45 |
bien2_TraitObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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46 |
traitName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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47 |
traitMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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48 |
traitUnit_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
12 |
observationID_index,OMIT#observationID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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13 |
dataSourceID_index,OMIT#dataSourceID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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14 |
dataSourceName_index,OMIT#dataSourceName_index,,Placeholder column created by MySQL to PostgreSQL translation |
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15 |
dataSourceNamePrimary_index,OMIT#dataSourceNamePrimary_index,,Placeholder column created by MySQL to PostgreSQL translation |
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16 |
plotID_index,OMIT#plotID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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17 |
observationType_index,OMIT#observationType_index,,Placeholder column created by MySQL to PostgreSQL translation |
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18 |
bien2_taxonomyID_index,OMIT#bien2_taxonomyID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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19 |
bien2_DBPlotID_index,OMIT#bien2_DBPlotID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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20 |
bien2_ObservationID_index,OMIT#bien2_ObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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21 |
bien2_OccurID_index,OMIT#bien2_OccurID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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22 |
taxonAuthorityVerbatim_index,OMIT#taxonAuthorityVerbatim_index,,Placeholder column created by MySQL to PostgreSQL translation |
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23 |
higherPlantGroup_index,OMIT#higherPlantGroup_index,,Placeholder column created by MySQL to PostgreSQL translation |
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24 |
family_index,OMIT#family_index,,Placeholder column created by MySQL to PostgreSQL translation |
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25 |
genus_index,OMIT#genus_index,,Placeholder column created by MySQL to PostgreSQL translation |
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26 |
species_index,OMIT#species_index,,Placeholder column created by MySQL to PostgreSQL translation |
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27 |
taxon_index,OMIT#taxon_index,,Placeholder column created by MySQL to PostgreSQL translation |
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28 |
taxonAuthor_index,OMIT#taxonAuthor_index,,Placeholder column created by MySQL to PostgreSQL translation |
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29 |
taxonMorphospecies_index,OMIT#taxonMorphospecies_index,,Placeholder column created by MySQL to PostgreSQL translation |
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30 |
rank_index,OMIT#rank_index,,Placeholder column created by MySQL to PostgreSQL translation |
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31 |
acceptance_index,OMIT#acceptance_index,,Placeholder column created by MySQL to PostgreSQL translation |
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32 |
country_index,OMIT#country_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
33 |
stateProvince_index,OMIT#stateProvince_index,,Placeholder column created by MySQL to PostgreSQL translation |
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34 |
collector_index,OMIT#collector_index,,Placeholder column created by MySQL to PostgreSQL translation |
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35 |
identifiedBy_index,OMIT#identifiedBy_index,,Placeholder column created by MySQL to PostgreSQL translation |
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36 |
plotCode_index,OMIT#plotCode_index,,Placeholder column created by MySQL to PostgreSQL translation |
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37 |
plotAreaHa_index,OMIT#plotAreaHa_index,,Placeholder column created by MySQL to PostgreSQL translation |
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38 |
plotMinDbh_index,OMIT#plotMinDbh_index,,Placeholder column created by MySQL to PostgreSQL translation |
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39 |
plotMethod_index,OMIT#plotMethod_index,,Placeholder column created by MySQL to PostgreSQL translation |
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40 |
isValidLatLong_index,OMIT#isValidLatLong_index,,Placeholder column created by MySQL to PostgreSQL translation |
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41 |
isGeovalid_index,OMIT#isGeovalid_index,,Placeholder column created by MySQL to PostgreSQL translation |
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42 |
isNewWorld_index,OMIT#isNewWorld_index,,Placeholder column created by MySQL to PostgreSQL translation |
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43 |
isCultivated_index,OMIT#isCultivated_index,,Placeholder column created by MySQL to PostgreSQL translation |
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44 |
isCultivatedReason_index,OMIT#isCultivatedReason_index,,Placeholder column created by MySQL to PostgreSQL translation |
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45 |
bien2_TraitObservationID_index,OMIT#bien2_TraitObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation |
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46 |
traitName_index,OMIT#traitName_index,,Placeholder column created by MySQL to PostgreSQL translation |
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47 |
traitMethod_index,OMIT#traitMethod_index,,Placeholder column created by MySQL to PostgreSQL translation |
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48 |
traitUnit_index,OMIT#traitUnit_index,,Placeholder column created by MySQL to PostgreSQL translation |
inputs/NY/Ecatalog_all/new_terms.csv | ||
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1 |
pkey,OMIT,,"CatalogNumber, etc. is a better pkey" |
|
2 |
key,OMIT,,"CatalogNumber, etc. is a better pkey" |
|
1 |
pkey,OMIT#pkey,,"CatalogNumber, etc. is a better pkey"
|
|
2 |
key,OMIT#key,,"CatalogNumber, etc. is a better pkey"
|
|
3 | 3 |
PlantFungDescription,occurrenceRemarks,/_join/2,Contains the specimenDescription |
4 | 4 |
Substrate,locality,"/_join/2/_label[label=""substrate""]/value", |
5 | 5 |
Vegetation,locality,"/_join/3/_label[label=""vegetation""]/value", |
6 |
UniqueNYInternalRecordNumber,OMIT,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID. |
|
6 |
UniqueNYInternalRecordNumber,OMIT#UniqueNYInternalRecordNumber,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID. |
inputs/Madidi/IndividualObservation/new_terms.csv | ||
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10 | 10 |
CollectorAbbrev,recordedBy,/_first/3, |
11 | 11 |
CurrentDet,scientificName,, |
12 | 12 |
CurrentDetRank,taxonRank,, |
13 |
CurrentDetFamily,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle" |
|
13 |
CurrentDetFamily,OMIT#CurrentDetFamily,,"Omitted because includes *family* author, which TNRS can’t handle"
|
|
14 | 14 |
CurrentDetQualifier,identificationQualifier,, |
15 | 15 |
FieldFamilyFullName,originalFamily,, |
16 | 16 |
FieldFamilyFullName,family,, |
17 |
FieldFamilyHTML,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle" |
|
17 |
FieldFamilyHTML,OMIT#FieldFamilyHTML,,"Omitted because includes *family* author, which TNRS can’t handle"
|
|
18 | 18 |
FieldNameFullName,originalTaxonName,, |
19 | 19 |
FieldNameAuthors,originalScientificNameAuthorship,, |
20 |
FieldNameHTML,OMIT,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors |
|
20 |
FieldNameHTML,OMIT#FieldNameHTML,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
|
|
21 | 21 |
MorphoSpeciesName,morphoname,, |
22 | 22 |
Diameter,diameterBreastHeight_cm,, |
23 | 23 |
TotalHeight,height_m,, |
inputs/HVAA/Specimen/map.csv | ||
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30 | 30 |
endDayOfYear,endDayOfYear,, |
31 | 31 |
verbatimEventDate,verbatimEventDate,, |
32 | 32 |
habitat,habitat,, |
33 |
fieldNotes,UNUSED,, |
|
33 |
fieldNotes,UNUSED#fieldNotes,,
|
|
34 | 34 |
fieldNumber,collectorNumber,, |
35 | 35 |
occurrenceRemarks,occurrenceRemarks,/_merge/1, |
36 | 36 |
dynamicProperties,occurrenceRemarks,/_merge/2,Contains occurrenceRemarks data |
... | ... | |
52 | 52 |
geodeticDatum,geodeticDatum,, |
53 | 53 |
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters,, |
54 | 54 |
footprintWKT,footprintWKT,, |
55 |
coordinatePrecision,UNUSED,, |
|
55 |
coordinatePrecision,UNUSED#coordinatePrecision,,
|
|
56 | 56 |
locationRemarks,locationRemarks,, |
57 | 57 |
verbatimCoordinates,verbatimCoordinates,, |
58 | 58 |
verbatimCoordinateSystem,coordinateUnits,, |
inputs/HVAA/Specimen/VegBIEN.csv | ||
---|---|---|
101 | 101 |
verbatimElevation,/location/verbatimelevation, |
102 | 102 |
associatedTaxa,,** No join mapping for associatedTaxa ** |
103 | 103 |
basisOfRecord,,** No join mapping for basisOfRecord ** |
104 |
coordinatePrecision,,** No non-empty join mapping for UNUSED ** |
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104 |
coordinatePrecision,,** No non-empty join mapping for UNUSED#coordinatePrecision **
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|
105 | 105 |
day,,** No join mapping for day ** |
106 | 106 |
disposition,,** No join mapping for disposition ** |
107 | 107 |
endDayOfYear,,** No join mapping for endDayOfYear ** |
108 |
fieldNotes,,** No non-empty join mapping for UNUSED ** |
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108 |
fieldNotes,,** No non-empty join mapping for UNUSED#fieldNotes **
|
|
109 | 109 |
geodeticDatum,,** No join mapping for geodeticDatum ** |
110 | 110 |
georeferenceProtocol,,** No join mapping for georeferenceProtocol ** |
111 | 111 |
georeferenceRemarks,,** No join mapping for georeferenceRemarks ** |
inputs/XAL/Specimen/map.csv | ||
---|---|---|
21 | 21 |
darwin:DayIdentified,dayIdentified,, |
22 | 22 |
darwin:TypeStatus,typeStatus,, |
23 | 23 |
darwin:CollectorNumber,collectorNumber,, |
24 |
darwin:FieldNumber,UNUSED,,This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). |
|
24 |
darwin:FieldNumber,UNUSED#darwin:FieldNumber,,This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber).
|
|
25 | 25 |
darwin:Collector,recordedBy,, |
26 | 26 |
darwin:YearCollected,yearCollected,, |
27 | 27 |
darwin:MonthCollected,monthCollected,, |
... | ... | |
35 | 35 |
darwin:Locality,locality,, |
36 | 36 |
darwin:Longitude,decimalLongitude,, |
37 | 37 |
darwin:Latitude,decimalLatitude,, |
38 |
darwin:CoordinatePrecision,UNUSED,, |
|
38 |
darwin:CoordinatePrecision,UNUSED#darwin:CoordinatePrecision,,
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|
39 | 39 |
darwin:MinimumElevation,minimumElevationInMeters,, |
40 | 40 |
darwin:MaximumElevation,maximumElevationInMeters,, |
41 | 41 |
darwin:MinimumDepth,minimumDepthInMeters,, |
inputs/XAL/Specimen/VegBIEN.csv | ||
---|---|---|
70 | 70 |
darwin:StateProvince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2, |
71 | 71 |
darwin:StateProvince,/location/locationplace/*_id/place/stateprovince, |
72 | 72 |
darwin:BasisOfRecord,,** No join mapping for basisOfRecord ** |
73 |
darwin:CoordinatePrecision,,** No non-empty join mapping for UNUSED ** |
|
73 |
darwin:CoordinatePrecision,,** No non-empty join mapping for UNUSED#darwin:CoordinatePrecision **
|
|
74 | 74 |
darwin:DateLastModified,,** No join mapping for modified ** |
75 |
darwin:FieldNumber,,** No non-empty join mapping for UNUSED ** This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). |
|
75 |
darwin:FieldNumber,,** No non-empty join mapping for UNUSED#darwin:FieldNumber ** This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber).
|
|
76 | 76 |
darwin:JulianDay,,** No join mapping for day ** |
77 | 77 |
darwin:PreparationType,,** No join mapping for preparations ** |
78 | 78 |
darwin:PreviousCatalogNumber,,** No join mapping for otherCatalogNumbers ** |
inputs/NCU/Specimen/map.csv | ||
---|---|---|
12 | 12 |
CurrentScientificNameWithAuthor,scientificName,, |
13 | 13 |
TypeStatus,typeStatus,, |
14 | 14 |
CollectionDate,dateCollected,, |
15 |
BarCode,OMIT,,"Omitted because this isn't specified on all rows, but SpecimenPK is" |
|
15 |
BarCode,OMIT#BarCode,,"Omitted because this isn't specified on all rows, but SpecimenPK is"
|
|
16 | 16 |
CatalogNumber,accessionNumber,, |
17 | 17 |
CatalogSeriesPrefix,specimenHolderInstitutions,/_alt/1, |
18 | 18 |
Description,occurrenceRemarks,, |
inputs/NCU/Specimen/VegBIEN.csv | ||
---|---|---|
58 | 58 |
county,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2, |
59 | 59 |
State,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2, |
60 | 60 |
State,/location/locationplace/*_id/place/stateprovince, |
61 |
BarCode,,"** No non-empty join mapping for OMIT ** Omitted because this isn't specified on all rows, but SpecimenPK is" |
|
61 |
BarCode,,"** No non-empty join mapping for OMIT#BarCode ** Omitted because this isn't specified on all rows, but SpecimenPK is"
|
|
62 | 62 |
BlockLocationReason,,** No join mapping for *BlockLocationReason ** |
63 | 63 |
BlockSpecificLocation,,** No join mapping for *BlockSpecificLocation ** |
64 | 64 |
CollectionObjectID,,** No join mapping for *CollectionObjectID ** |
inputs/bien2_traits/TraitObservation/map.csv | ||
---|---|---|
1 | 1 |
bien2_traits,VegCore,Filter,Comments |
2 | 2 |
TraitObservationID,occurrenceID,, |
3 |
TaxonomyID,UNUSED,,Always 0 |
|
3 |
TaxonomyID,UNUSED#TaxonomyID,,Always 0
|
|
4 | 4 |
Family,family,, |
5 | 5 |
Genus,genus,, |
6 | 6 |
SpecificEpithet,specificEpithet,, |
inputs/bien2_traits/TraitObservation/VegBIEN.csv | ||
---|---|---|
56 | 56 |
Region,,** No join mapping for *Region ** |
57 | 57 |
SourceCitation,,** No join mapping for *SourceCitation ** |
58 | 58 |
SourceID,,** No join mapping for *SourceID ** |
59 |
TaxonomyID,,** No non-empty join mapping for UNUSED ** Always 0 |
|
59 |
TaxonomyID,,** No non-empty join mapping for UNUSED#TaxonomyID ** Always 0
|
|
60 | 60 |
URLSource,,** No join mapping for *URLSource ** |
61 | 61 |
VisitingDate,,** No join mapping for *VisitingDate ** |
inputs/TEAM/VL/map.csv | ||
---|---|---|
17 | 17 |
Sampling Unit Name,*Sampling Unit Name,, |
18 | 18 |
Latitude,decimalLatitude,, |
19 | 19 |
Longitude,decimalLongitude,, |
20 |
Method,OMIT,,"Just contains ""Derived"", for 357 rows" |
|
20 |
Method,OMIT#Method,,"Just contains ""Derived"", for 357 rows"
|
|
21 | 21 |
Subplot Number,subplot,, |
22 | 22 |
1ha Plot X Coordinate,organismX_m,,"""Point of intersection {in the X axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot X Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)" |
23 | 23 |
1ha Plot Y Coordinate,organismY_m,,"""Point of intersection {in the Y axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot Y Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)" |
inputs/TEAM/VL/VegBIEN.csv | ||
---|---|---|
50 | 50 |
Location Codes,,** No join mapping for *Location Codes ** |
51 | 51 |
Max Diameter,,** No join mapping for *Max Diameter ** |
52 | 52 |
Max Diameter POM,,** No join mapping for *Max Diameter POM ** |
53 |
Method,,"** No non-empty join mapping for OMIT ** Just contains ""Derived"", for 357 rows" |
|
53 |
Method,,"** No non-empty join mapping for OMIT#Method ** Just contains ""Derived"", for 357 rows"
|
|
54 | 54 |
Protocol Version,,** No join mapping for *Protocol Version ** |
55 | 55 |
Sampling Period,,** No join mapping for *Sampling Period ** |
56 | 56 |
Sampling Unit Name,,** No join mapping for *Sampling Unit Name ** |
inputs/TEAM/VT/map.csv | ||
---|---|---|
17 | 17 |
Sampling Unit Name,*Sampling Unit Name,, |
18 | 18 |
Latitude,decimalLatitude,, |
19 | 19 |
Longitude,decimalLongitude,, |
20 |
Spatial Method,OMIT,,"Just contains ""Derived"", for 14927 rows" |
|
20 |
Spatial Method,OMIT#Spatial Method,,"Just contains ""Derived"", for 14927 rows"
|
|
21 | 21 |
Subplot Number,subplot,, |
22 | 22 |
1ha Plot X Coordinate,organismX_m,,"""Point of intersection {in the X axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot X Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)" |
23 | 23 |
1ha Plot Y Coordinate,organismY_m,,"""Point of intersection {in the Y axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot Y Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)" |
inputs/TEAM/VT/VegBIEN.csv | ||
---|---|---|
53 | 53 |
Protocol Version,,** No join mapping for *Protocol Version ** |
54 | 54 |
Sampling Period,,** No join mapping for *Sampling Period ** |
55 | 55 |
Sampling Unit Name,,** No join mapping for *Sampling Unit Name ** |
56 |
Spatial Method,,"** No non-empty join mapping for OMIT ** Just contains ""Derived"", for 14927 rows" |
|
56 |
Spatial Method,,"** No non-empty join mapping for OMIT#Spatial Method ** Just contains ""Derived"", for 14927 rows"
|
|
57 | 57 |
row_num,,** No join mapping for *row_num ** |
inputs/SALVIAS/plotMetadata_/VegBIEN.csv | ||
---|---|---|
69 | 69 |
PlotID,"/location/sourceaccessioncode/_first/2/_if[@name=""if locationID""]/cond/_exists","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata." |
70 | 70 |
PlotID,"/location/sourceaccessioncode/_first/2/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/then/_join/1","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata." |
71 | 71 |
ElevSource,,** No join mapping for *ElevSource ** |
72 |
MethodCode,,** No non-empty join mapping for OMIT ** Not globally unique after lookup_MethodCode_Description is combined with PlotMethod |
|
72 |
MethodCode,,** No non-empty join mapping for OMIT#MethodCode ** Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
|
|
73 | 73 |
PrecipSource,,** No join mapping for *PrecipSource ** |
74 | 74 |
PrimOwnerID,,** No join mapping for *PrimOwnerID ** |
75 | 75 |
RevisionComments,,** No join mapping for *RevisionComments ** |
inputs/U/Specimen/map.csv | ||
---|---|---|
3 | 3 |
ID,dataProviderRecordID,, |
4 | 4 |
Barcode,accessionNumber,, |
5 | 5 |
Collector,recordedBy,/_join/1, |
6 |
Prefix,UNUSED,, |
|
6 |
Prefix,UNUSED#Prefix,,
|
|
7 | 7 |
Number,collectorNumber,, |
8 |
Suffix,UNUSED,, |
|
8 |
Suffix,UNUSED#Suffix,,
|
|
9 | 9 |
Addcoll,recordedBy,/_join/2, |
10 | 10 |
Colldd,dayCollected,, |
11 | 11 |
Collmm,monthCollected,, |
12 | 12 |
Collyy,yearCollected,, |
13 |
DateInfo,UNUSED,, |
|
13 |
DateInfo,UNUSED#DateInfo,,
|
|
14 | 14 |
Family,family,, |
15 | 15 |
Genus,genus,, |
16 | 16 |
cf,identificationQualifier,, |
inputs/QFA/Specimen/map.csv | ||
---|---|---|
5 | 5 |
recordNumber,collectorNumber,, |
6 | 6 |
family,family,, |
7 | 7 |
associatedSequences,associatedSequences,, |
8 |
institutionID,UNUSED,, |
|
8 |
institutionID,UNUSED#institutionID,,
|
|
9 | 9 |
specificEpithet,specificEpithet,, |
10 | 10 |
datasetName,dataset,, |
11 | 11 |
locality,locality,, |
inputs/UBC/Specimen/map.csv | ||
---|---|---|
3 | 3 |
id,dataProviderRecordID,, |
4 | 4 |
collectionCode,collection,, |
5 | 5 |
identificationQualifier,identificationQualifier,, |
6 |
institutionID,UNUSED,, |
|
6 |
institutionID,UNUSED#institutionID,,
|
|
7 | 7 |
taxonRank,taxonRank,, |
8 | 8 |
nomenclaturalCode,nomenclaturalCode,, |
9 | 9 |
verbatimElevation,verbatimElevation,, |
inputs/HIBG/Specimen/map.csv | ||
---|---|---|
7 | 7 |
verbatimSRS,verbatimSRS,, |
8 | 8 |
references,distributors,, |
9 | 9 |
habitat,habitat,, |
10 |
institutionID,UNUSED,, |
|
10 |
institutionID,UNUSED#institutionID,,
|
|
11 | 11 |
decimalLongitude,decimalLongitude,, |
12 | 12 |
verbatimCoordinateSystem,coordinateUnits,, |
13 | 13 |
catalogNumber,accessionNumber,, |
inputs/bien_web/observation/VegBIEN.csv | ||
---|---|---|
72 | 72 |
abund10,,** No join mapping for *abund10 ** |
73 | 73 |
abund2.5,,** No join mapping for *abund2.5 ** |
74 | 74 |
acceptance,,** No join mapping for *acceptance ** |
75 |
acceptance_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
75 |
acceptance_index,,** No non-empty join mapping for OMIT#acceptance_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
76 | 76 |
bien2_DBPlotID,,** No join mapping for *bien2_DBPlotID ** |
77 |
bien2_DBPlotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
77 |
bien2_DBPlotID_index,,** No non-empty join mapping for OMIT#bien2_DBPlotID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
78 | 78 |
bien2_ObservationID,,** No join mapping for *bien2_ObservationID ** |
79 |
bien2_ObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
79 |
bien2_ObservationID_index,,** No non-empty join mapping for OMIT#bien2_ObservationID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
80 | 80 |
bien2_OccurID,,** No join mapping for *bien2_OccurID ** |
81 |
bien2_OccurID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
81 |
bien2_OccurID_index,,** No non-empty join mapping for OMIT#bien2_OccurID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
82 | 82 |
bien2_TraitObservationID,,** No join mapping for *bien2_TraitObservationID ** |
83 |
bien2_TraitObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
83 |
bien2_TraitObservationID_index,,** No non-empty join mapping for OMIT#bien2_TraitObservationID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
84 | 84 |
bien2_taxonomyID,,** No join mapping for *bien2_taxonomyID ** |
85 |
bien2_taxonomyID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
86 |
collector_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
85 |
bien2_taxonomyID_index,,** No non-empty join mapping for OMIT#bien2_taxonomyID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
86 |
collector_index,,** No non-empty join mapping for OMIT#collector_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
87 | 87 |
countryError,,** No join mapping for *countryError ** |
88 |
country_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
88 |
country_index,,** No non-empty join mapping for OMIT#country_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
89 | 89 |
dataSourceID,,** No join mapping for *dataSourceID ** |
90 |
dataSourceID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
90 |
dataSourceID_index,,** No non-empty join mapping for OMIT#dataSourceID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
91 | 91 |
dataSourceNamePrimary,,** No join mapping for *dataSourceNamePrimary ** |
92 |
dataSourceNamePrimary_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
93 |
dataSourceName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
94 |
family_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
95 |
genus_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
92 |
dataSourceNamePrimary_index,,** No non-empty join mapping for OMIT#dataSourceNamePrimary_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
93 |
dataSourceName_index,,** No non-empty join mapping for OMIT#dataSourceName_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
94 |
family_index,,** No non-empty join mapping for OMIT#family_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
95 |
genus_index,,** No non-empty join mapping for OMIT#genus_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
96 | 96 |
higherPlantGroup,,** No join mapping for higherPlantGroup ** |
97 |
higherPlantGroup_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
98 |
identifiedBy_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
97 |
higherPlantGroup_index,,** No non-empty join mapping for OMIT#higherPlantGroup_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
98 |
identifiedBy_index,,** No non-empty join mapping for OMIT#identifiedBy_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
99 | 99 |
isCultivatedReason,,** No join mapping for cultivatedBasis ** |
100 |
isCultivatedReason_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
101 |
isCultivated_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
102 |
isGeovalid_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
100 |
isCultivatedReason_index,,** No non-empty join mapping for OMIT#isCultivatedReason_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
101 |
isCultivated_index,,** No non-empty join mapping for OMIT#isCultivated_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
102 |
isGeovalid_index,,** No non-empty join mapping for OMIT#isGeovalid_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
103 | 103 |
isNewWorld,,** No join mapping for isNewWorld ** |
104 |
isNewWorld_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
105 |
isValidLatLong_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
104 |
isNewWorld_index,,** No non-empty join mapping for OMIT#isNewWorld_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
105 |
isValidLatLong_index,,** No non-empty join mapping for OMIT#isValidLatLong_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
106 | 106 |
localityDescription,,** No join mapping for *localityDescription ** |
107 |
observationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
108 |
observationType_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
109 |
plotAreaHa_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
110 |
plotCode_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
111 |
plotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
112 |
plotMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
107 |
observationID_index,,** No non-empty join mapping for OMIT#observationID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
108 |
observationType_index,,** No non-empty join mapping for OMIT#observationType_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
109 |
plotAreaHa_index,,** No non-empty join mapping for OMIT#plotAreaHa_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
110 |
plotCode_index,,** No non-empty join mapping for OMIT#plotCode_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
111 |
plotID_index,,** No non-empty join mapping for OMIT#plotID_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
112 |
plotMethod_index,,** No non-empty join mapping for OMIT#plotMethod_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
113 | 113 |
plotMinDbh,,** No join mapping for *plotMinDbh ** |
114 |
plotMinDbh_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
114 |
plotMinDbh_index,,** No non-empty join mapping for OMIT#plotMinDbh_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
115 | 115 |
rank,,** No join mapping for *rank ** |
116 |
rank_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
117 |
species_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
116 |
rank_index,,** No non-empty join mapping for OMIT#rank_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
117 |
species_index,,** No non-empty join mapping for OMIT#species_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
118 | 118 |
stateProvinceError,,** No join mapping for *stateProvinceError ** |
119 |
stateProvince_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
120 |
taxonAuthor_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
119 |
stateProvince_index,,** No non-empty join mapping for OMIT#stateProvince_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
120 |
taxonAuthor_index,,** No non-empty join mapping for OMIT#taxonAuthor_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
121 | 121 |
taxonAuthorityVerbatim,,** No join mapping for *taxonAuthorityVerbatim ** |
122 |
taxonAuthorityVerbatim_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
122 |
taxonAuthorityVerbatim_index,,** No non-empty join mapping for OMIT#taxonAuthorityVerbatim_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
123 | 123 |
taxonMorphospecies,,** No join mapping for speciesBinomialWithMorphospecies ** |
124 |
taxonMorphospecies_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
125 |
taxon_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
124 |
taxonMorphospecies_index,,** No non-empty join mapping for OMIT#taxonMorphospecies_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
125 |
taxon_index,,** No non-empty join mapping for OMIT#taxon_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
126 | 126 |
traitMethod,,** No join mapping for *traitMethod ** |
127 |
traitMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
128 |
traitName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
127 |
traitMethod_index,,** No non-empty join mapping for OMIT#traitMethod_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
128 |
traitName_index,,** No non-empty join mapping for OMIT#traitName_index ** Placeholder column created by MySQL to PostgreSQL translation
|
|
129 | 129 |
traitUnit,,** No join mapping for *traitUnit ** |
130 |
traitUnit_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
|
130 |
traitUnit_index,,** No non-empty join mapping for OMIT#traitUnit_index ** Placeholder column created by MySQL to PostgreSQL translation |
inputs/NY/Ecatalog_all/VegBIEN.csv | ||
---|---|---|
79 | 79 |
StateProvince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2, |
80 | 80 |
StateProvince,/location/locationplace/*_id/place/stateprovince, |
81 | 81 |
BasisOfRecord,,** No join mapping for basisOfRecord ** |
82 |
CollectorNumber,,** No non-empty join mapping for UNUSED ** |
|
82 |
CollectorNumber,,** No non-empty join mapping for UNUSED#CollectorNumber **
|
|
83 | 83 |
DateLastModified,,** No join mapping for modified ** |
84 | 84 |
JulianDay,,** No join mapping for day ** |
85 | 85 |
PreparationType,,** No join mapping for preparations ** |
... | ... | |
88 | 88 |
RelationshipType,,** No join mapping for relationshipOfResource ** |
89 | 89 |
TimeOfDay,,** No join mapping for eventTime ** |
90 | 90 |
TypeStatus,,** No join mapping for typeStatus ** |
91 |
UniqueNYInternalRecordNumber,,** No non-empty join mapping for OMIT ** Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID. |
|
92 |
key,,"** No non-empty join mapping for OMIT ** CatalogNumber, etc. is a better pkey" |
|
93 |
pkey,,"** No non-empty join mapping for OMIT ** CatalogNumber, etc. is a better pkey" |
|
91 |
UniqueNYInternalRecordNumber,,** No non-empty join mapping for OMIT#UniqueNYInternalRecordNumber ** Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID. |
|
92 |
key,,"** No non-empty join mapping for OMIT#key ** CatalogNumber, etc. is a better pkey" |
|
93 |
pkey,,"** No non-empty join mapping for OMIT#pkey ** CatalogNumber, etc. is a better pkey" |
inputs/Madidi/IndividualObservation/VegBIEN.csv | ||
---|---|---|
72 | 72 |
Sequence,"/location/sourceaccessioncode/_first/2/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/then/_join/2", |
73 | 73 |
SubplotX,/location/sublocationxposition_m, |
74 | 74 |
SubplotY,/location/sublocationyposition_m, |
75 |
AreaRachilla1,,** No non-empty join mapping for UNUSED ** |
|
76 |
AreaRachilla2,,** No non-empty join mapping for UNUSED ** |
|
77 |
AreaRachilla3,,** No non-empty join mapping for UNUSED ** |
|
78 |
AreaRachilla4,,** No non-empty join mapping for UNUSED ** |
|
79 |
AreaRachilla5,,** No non-empty join mapping for UNUSED ** |
|
80 |
AreaRachis1,,** No non-empty join mapping for UNUSED ** |
|
81 |
AreaRachis2,,** No non-empty join mapping for UNUSED ** |
|
82 |
AreaRachis3,,** No non-empty join mapping for UNUSED ** |
|
83 |
AreaRachis4,,** No non-empty join mapping for UNUSED ** |
|
84 |
AreaRachis5,,** No non-empty join mapping for UNUSED ** |
|
75 |
AreaRachilla1,,** No non-empty join mapping for UNUSED#AreaRachilla1 **
|
|
76 |
AreaRachilla2,,** No non-empty join mapping for UNUSED#AreaRachilla2 **
|
|
77 |
AreaRachilla3,,** No non-empty join mapping for UNUSED#AreaRachilla3 **
|
|
78 |
AreaRachilla4,,** No non-empty join mapping for UNUSED#AreaRachilla4 **
|
|
79 |
AreaRachilla5,,** No non-empty join mapping for UNUSED#AreaRachilla5 **
|
|
80 |
AreaRachis1,,** No non-empty join mapping for UNUSED#AreaRachis1 **
|
|
81 |
AreaRachis2,,** No non-empty join mapping for UNUSED#AreaRachis2 **
|
|
82 |
AreaRachis3,,** No non-empty join mapping for UNUSED#AreaRachis3 **
|
|
83 |
AreaRachis4,,** No non-empty join mapping for UNUSED#AreaRachis4 **
|
|
84 |
AreaRachis5,,** No non-empty join mapping for UNUSED#AreaRachis5 **
|
|
85 | 85 |
BoleHeight,,** No join mapping for *BoleHeight ** |
86 |
CauseOfDeath1,,** No non-empty join mapping for UNUSED ** |
|
87 |
CauseOfDeath2,,** No non-empty join mapping for UNUSED ** |
|
88 |
CauseOfDeath3,,** No non-empty join mapping for UNUSED ** |
|
89 |
CauseOfDeath4,,** No non-empty join mapping for UNUSED ** |
|
90 |
CauseOfDeath5,,** No non-empty join mapping for UNUSED ** |
|
86 |
CauseOfDeath1,,** No non-empty join mapping for UNUSED#CauseOfDeath1 **
|
|
87 |
CauseOfDeath2,,** No non-empty join mapping for UNUSED#CauseOfDeath2 **
|
|
88 |
CauseOfDeath3,,** No non-empty join mapping for UNUSED#CauseOfDeath3 **
|
|
89 |
CauseOfDeath4,,** No non-empty join mapping for UNUSED#CauseOfDeath4 **
|
|
90 |
CauseOfDeath5,,** No non-empty join mapping for UNUSED#CauseOfDeath5 **
|
|
91 | 91 |
Circumference,,** No join mapping for *Circumference ** |
92 | 92 |
CommonName,,** No join mapping for vernacularName ** |
93 |
CompoundLeaf,,** No non-empty join mapping for UNUSED ** |
|
94 |
CompoundLeafID,,** No non-empty join mapping for UNUSED ** |
|
93 |
CompoundLeaf,,** No non-empty join mapping for UNUSED#CompoundLeaf **
|
|
94 |
CompoundLeafID,,** No non-empty join mapping for UNUSED#CompoundLeafID **
|
|
95 | 95 |
CrownPositionName,,** No join mapping for *CrownPositionName ** |
96 | 96 |
CrownShapeName,,** No join mapping for *CrownShapeName ** |
97 |
CurrentDetFamily,,"** No non-empty join mapping for OMIT ** Omitted because includes *family* author, which TNRS can’t handle" |
|
97 |
CurrentDetFamily,,"** No non-empty join mapping for OMIT#CurrentDetFamily ** Omitted because includes *family* author, which TNRS can’t handle"
|
|
98 | 98 |
DNASample,,** No join mapping for *DNASample ** |
99 |
Decomposition,,** No non-empty join mapping for UNUSED ** |
|
100 |
DiameterWithBark,,** No non-empty join mapping for UNUSED ** |
|
101 |
DiameterWithoutBark,,** No non-empty join mapping for UNUSED ** |
|
102 |
DirectionOfFall,,** No non-empty join mapping for UNUSED ** |
|
103 |
DryWeight,,** No non-empty join mapping for UNUSED ** |
|
104 |
FieldFamilyHTML,,"** No non-empty join mapping for OMIT ** Omitted because includes *family* author, which TNRS can’t handle" |
|
105 |
FieldNameHTML,,** No non-empty join mapping for OMIT ** Adds HTML formatting to FieldNameFullName+FieldNameAuthors |
|
106 |
HeightButtresses,,** No non-empty join mapping for UNUSED ** |
|
99 |
Decomposition,,** No non-empty join mapping for UNUSED#Decomposition **
|
|
100 |
DiameterWithBark,,** No non-empty join mapping for UNUSED#DiameterWithBark **
|
|
101 |
DiameterWithoutBark,,** No non-empty join mapping for UNUSED#DiameterWithoutBark **
|
|
102 |
DirectionOfFall,,** No non-empty join mapping for UNUSED#DirectionOfFall **
|
|
103 |
DryWeight,,** No non-empty join mapping for UNUSED#DryWeight **
|
|
104 |
FieldFamilyHTML,,"** No non-empty join mapping for OMIT#FieldFamilyHTML ** Omitted because includes *family* author, which TNRS can’t handle"
|
|
105 |
FieldNameHTML,,** No non-empty join mapping for OMIT#FieldNameHTML ** Adds HTML formatting to FieldNameFullName+FieldNameAuthors
|
|
106 |
HeightButtresses,,** No non-empty join mapping for UNUSED#HeightButtresses **
|
|
107 | 107 |
InstitutionString,,** No join mapping for *InstitutionString ** |
108 | 108 |
IsAlive,,** No join mapping for *IsAlive ** |
109 |
LeafPhoto1,,** No non-empty join mapping for UNUSED ** |
|
110 |
LeafPhoto2,,** No non-empty join mapping for UNUSED ** |
|
111 |
LeafPhoto3,,** No non-empty join mapping for UNUSED ** |
|
112 |
LeafPhoto4,,** No non-empty join mapping for UNUSED ** |
|
113 |
LeafPhoto5,,** No non-empty join mapping for UNUSED ** |
|
109 |
LeafPhoto1,,** No non-empty join mapping for UNUSED#LeafPhoto1 **
|
|
110 |
LeafPhoto2,,** No non-empty join mapping for UNUSED#LeafPhoto2 **
|
|
111 |
LeafPhoto3,,** No non-empty join mapping for UNUSED#LeafPhoto3 **
|
|
112 |
LeafPhoto4,,** No non-empty join mapping for UNUSED#LeafPhoto4 **
|
|
113 |
LeafPhoto5,,** No non-empty join mapping for UNUSED#LeafPhoto5 **
|
|
114 | 114 |
LianaPresenceName,,** No join mapping for *LianaPresenceName ** |
115 |
MortalityType,,** No non-empty join mapping for UNUSED ** |
|
116 |
MultipleFalls,,** No non-empty join mapping for UNUSED ** |
|
117 |
NitrogenContent,,** No non-empty join mapping for UNUSED ** |
|
118 |
NumberFolioles1,,** No non-empty join mapping for UNUSED ** |
|
119 |
NumberFolioles2,,** No non-empty join mapping for UNUSED ** |
|
120 |
NumberFolioles3,,** No non-empty join mapping for UNUSED ** |
|
121 |
NumberFolioles4,,** No non-empty join mapping for UNUSED ** |
|
122 |
NumberFolioles5,,** No non-empty join mapping for UNUSED ** |
|
123 |
NumberFoliolules1,,** No non-empty join mapping for UNUSED ** |
|
124 |
NumberFoliolules2,,** No non-empty join mapping for UNUSED ** |
|
125 |
NumberFoliolules3,,** No non-empty join mapping for UNUSED ** |
|
126 |
NumberFoliolules4,,** No non-empty join mapping for UNUSED ** |
|
127 |
NumberFoliolules5,,** No non-empty join mapping for UNUSED ** |
|
128 |
NumberOfLeaves,,** No non-empty join mapping for UNUSED ** |
|
115 |
MortalityType,,** No non-empty join mapping for UNUSED#MortalityType **
|
|
116 |
MultipleFalls,,** No non-empty join mapping for UNUSED#MultipleFalls **
|
|
117 |
NitrogenContent,,** No non-empty join mapping for UNUSED#NitrogenContent **
|
|
118 |
NumberFolioles1,,** No non-empty join mapping for UNUSED#NumberFolioles1 **
|
|
119 |
NumberFolioles2,,** No non-empty join mapping for UNUSED#NumberFolioles2 **
|
|
120 |
NumberFolioles3,,** No non-empty join mapping for UNUSED#NumberFolioles3 **
|
|
121 |
NumberFolioles4,,** No non-empty join mapping for UNUSED#NumberFolioles4 **
|
|
122 |
NumberFolioles5,,** No non-empty join mapping for UNUSED#NumberFolioles5 **
|
|
123 |
NumberFoliolules1,,** No non-empty join mapping for UNUSED#NumberFoliolules1 **
|
|
124 |
NumberFoliolules2,,** No non-empty join mapping for UNUSED#NumberFoliolules2 **
|
|
125 |
NumberFoliolules3,,** No non-empty join mapping for UNUSED#NumberFoliolules3 **
|
|
126 |
NumberFoliolules4,,** No non-empty join mapping for UNUSED#NumberFoliolules4 **
|
|
127 |
NumberFoliolules5,,** No non-empty join mapping for UNUSED#NumberFoliolules5 **
|
|
128 |
NumberOfLeaves,,** No non-empty join mapping for UNUSED#NumberOfLeaves **
|
|
129 | 129 |
OrientationXDegrees,,** No join mapping for *OrientationXDegrees ** |
130 | 130 |
OrientationYDegrees,,** No join mapping for *OrientationYDegrees ** |
131 | 131 |
Phenology1,,** No join mapping for *Phenology1 ** |
132 | 132 |
Phenology2,,** No join mapping for *Phenology2 ** |
133 | 133 |
Phenology3,,** No join mapping for *Phenology3 ** |
134 | 134 |
Phenology4,,** No join mapping for *Phenology4 ** |
135 |
RachisPhoto1,,** No non-empty join mapping for UNUSED ** |
|
136 |
RachisPhoto2,,** No non-empty join mapping for UNUSED ** |
|
137 |
RachisPhoto3,,** No non-empty join mapping for UNUSED ** |
|
138 |
RachisPhoto4,,** No non-empty join mapping for UNUSED ** |
|
139 |
RachisPhoto5,,** No non-empty join mapping for UNUSED ** |
|
140 |
RemainingTrunkHeight,,** No non-empty join mapping for UNUSED ** |
|
135 |
RachisPhoto1,,** No non-empty join mapping for UNUSED#RachisPhoto1 **
|
|
136 |
RachisPhoto2,,** No non-empty join mapping for UNUSED#RachisPhoto2 **
|
|
137 |
RachisPhoto3,,** No non-empty join mapping for UNUSED#RachisPhoto3 **
|
|
138 |
RachisPhoto4,,** No non-empty join mapping for UNUSED#RachisPhoto4 **
|
|
139 |
RachisPhoto5,,** No non-empty join mapping for UNUSED#RachisPhoto5 **
|
|
140 |
RemainingTrunkHeight,,** No non-empty join mapping for UNUSED#RemainingTrunkHeight **
|
|
141 | 141 |
RepresentativeCollectionNumber,,** No join mapping for *RepresentativeCollectionNumber ** |
142 | 142 |
RepresentativeSpecimenCollectorAbbreviation,,** No join mapping for *RepresentativeSpecimenCollectorAbbreviation ** |
143 | 143 |
RepresentativeSpecimenID,,** No join mapping for *RepresentativeSpecimenID ** |
144 | 144 |
RepresentativeSpecimenSeniorCollector,,** No join mapping for *RepresentativeSpecimenSeniorCollector ** |
145 |
SLAArea1,,** No non-empty join mapping for UNUSED ** |
|
146 |
SLAArea10,,** No non-empty join mapping for UNUSED ** |
|
147 |
SLAArea11,,** No non-empty join mapping for UNUSED ** |
|
148 |
SLAArea12,,** No non-empty join mapping for UNUSED ** |
|
149 |
SLAArea13,,** No non-empty join mapping for UNUSED ** |
|
150 |
SLAArea14,,** No non-empty join mapping for UNUSED ** |
|
151 |
SLAArea15,,** No non-empty join mapping for UNUSED ** |
|
152 |
SLAArea2,,** No non-empty join mapping for UNUSED ** |
|
153 |
SLAArea3,,** No non-empty join mapping for UNUSED ** |
|
154 |
SLAArea4,,** No non-empty join mapping for UNUSED ** |
|
155 |
SLAArea5,,** No non-empty join mapping for UNUSED ** |
|
156 |
SLAArea6,,** No non-empty join mapping for UNUSED ** |
|
157 |
SLAArea7,,** No non-empty join mapping for UNUSED ** |
|
158 |
SLAArea8,,** No non-empty join mapping for UNUSED ** |
|
159 |
SLAArea9,,** No non-empty join mapping for UNUSED ** |
|
145 |
SLAArea1,,** No non-empty join mapping for UNUSED#SLAArea1 **
|
|
146 |
SLAArea10,,** No non-empty join mapping for UNUSED#SLAArea10 **
|
|
147 |
SLAArea11,,** No non-empty join mapping for UNUSED#SLAArea11 **
|
|
148 |
SLAArea12,,** No non-empty join mapping for UNUSED#SLAArea12 **
|
|
149 |
SLAArea13,,** No non-empty join mapping for UNUSED#SLAArea13 **
|
|
150 |
SLAArea14,,** No non-empty join mapping for UNUSED#SLAArea14 **
|
|
151 |
SLAArea15,,** No non-empty join mapping for UNUSED#SLAArea15 **
|
|
152 |
SLAArea2,,** No non-empty join mapping for UNUSED#SLAArea2 **
|
|
153 |
SLAArea3,,** No non-empty join mapping for UNUSED#SLAArea3 **
|
|
154 |
SLAArea4,,** No non-empty join mapping for UNUSED#SLAArea4 **
|
|
155 |
SLAArea5,,** No non-empty join mapping for UNUSED#SLAArea5 **
|
|
156 |
SLAArea6,,** No non-empty join mapping for UNUSED#SLAArea6 **
|
|
157 |
SLAArea7,,** No non-empty join mapping for UNUSED#SLAArea7 **
|
|
158 |
SLAArea8,,** No non-empty join mapping for UNUSED#SLAArea8 **
|
|
159 |
SLAArea9,,** No non-empty join mapping for UNUSED#SLAArea9 **
|
|
160 | 160 |
SubplotX2,,** No join mapping for *SubplotX2 ** |
161 | 161 |
SubplotY2,,** No join mapping for *SubplotY2 ** |
162 |
Thickness1,,** No non-empty join mapping for UNUSED ** |
|
163 |
Thickness10,,** No non-empty join mapping for UNUSED ** |
|
164 |
Thickness11,,** No non-empty join mapping for UNUSED ** |
|
165 |
Thickness12,,** No non-empty join mapping for UNUSED ** |
|
166 |
Thickness13,,** No non-empty join mapping for UNUSED ** |
|
167 |
Thickness14,,** No non-empty join mapping for UNUSED ** |
|
168 |
Thickness15,,** No non-empty join mapping for UNUSED ** |
|
169 |
Thickness2,,** No non-empty join mapping for UNUSED ** |
|
170 |
Thickness3,,** No non-empty join mapping for UNUSED ** |
|
171 |
Thickness4,,** No non-empty join mapping for UNUSED ** |
|
172 |
Thickness5,,** No non-empty join mapping for UNUSED ** |
|
173 |
Thickness6,,** No non-empty join mapping for UNUSED ** |
|
174 |
Thickness7,,** No non-empty join mapping for UNUSED ** |
|
175 |
Thickness8,,** No non-empty join mapping for UNUSED ** |
|
176 |
Thickness9,,** No non-empty join mapping for UNUSED ** |
|
177 |
TotArea1,,** No non-empty join mapping for UNUSED ** |
|
178 |
TotArea10,,** No non-empty join mapping for UNUSED ** |
|
179 |
TotArea11,,** No non-empty join mapping for UNUSED ** |
|
180 |
TotArea12,,** No non-empty join mapping for UNUSED ** |
|
181 |
TotArea13,,** No non-empty join mapping for UNUSED ** |
|
182 |
TotArea14,,** No non-empty join mapping for UNUSED ** |
|
183 |
TotArea15,,** No non-empty join mapping for UNUSED ** |
|
184 |
TotArea2,,** No non-empty join mapping for UNUSED ** |
|
185 |
TotArea3,,** No non-empty join mapping for UNUSED ** |
|
186 |
TotArea4,,** No non-empty join mapping for UNUSED ** |
|
187 |
TotArea5,,** No non-empty join mapping for UNUSED ** |
|
188 |
TotArea6,,** No non-empty join mapping for UNUSED ** |
|
189 |
TotArea7,,** No non-empty join mapping for UNUSED ** |
|
190 |
TotArea8,,** No non-empty join mapping for UNUSED ** |
|
191 |
TotArea9,,** No non-empty join mapping for UNUSED ** |
|
192 |
TreeLeaf3Notes,,** No non-empty join mapping for UNUSED ** |
|
193 |
TreeMortalityNotes,,** No non-empty join mapping for UNUSED ** |
|
194 |
TreeTrunkNotes,,** No non-empty join mapping for UNUSED ** |
|
195 |
VesselArea,,** No non-empty join mapping for UNUSED ** |
|
196 |
VesselNumber,,** No non-empty join mapping for UNUSED ** |
|
197 |
Volume1,,** No non-empty join mapping for UNUSED ** |
|
198 |
Volume2,,** No non-empty join mapping for UNUSED ** |
|
162 |
Thickness1,,** No non-empty join mapping for UNUSED#Thickness1 **
|
|
163 |
Thickness10,,** No non-empty join mapping for UNUSED#Thickness10 **
|
|
164 |
Thickness11,,** No non-empty join mapping for UNUSED#Thickness11 **
|
|
165 |
Thickness12,,** No non-empty join mapping for UNUSED#Thickness12 **
|
|
166 |
Thickness13,,** No non-empty join mapping for UNUSED#Thickness13 **
|
|
167 |
Thickness14,,** No non-empty join mapping for UNUSED#Thickness14 **
|
|
168 |
Thickness15,,** No non-empty join mapping for UNUSED#Thickness15 **
|
|
169 |
Thickness2,,** No non-empty join mapping for UNUSED#Thickness2 **
|
|
170 |
Thickness3,,** No non-empty join mapping for UNUSED#Thickness3 **
|
|
171 |
Thickness4,,** No non-empty join mapping for UNUSED#Thickness4 **
|
|
172 |
Thickness5,,** No non-empty join mapping for UNUSED#Thickness5 **
|
|
173 |
Thickness6,,** No non-empty join mapping for UNUSED#Thickness6 **
|
|
174 |
Thickness7,,** No non-empty join mapping for UNUSED#Thickness7 **
|
|
175 |
Thickness8,,** No non-empty join mapping for UNUSED#Thickness8 **
|
|
176 |
Thickness9,,** No non-empty join mapping for UNUSED#Thickness9 **
|
|
177 |
TotArea1,,** No non-empty join mapping for UNUSED#TotArea1 **
|
|
178 |
TotArea10,,** No non-empty join mapping for UNUSED#TotArea10 **
|
|
179 |
TotArea11,,** No non-empty join mapping for UNUSED#TotArea11 **
|
|
180 |
TotArea12,,** No non-empty join mapping for UNUSED#TotArea12 **
|
|
181 |
TotArea13,,** No non-empty join mapping for UNUSED#TotArea13 **
|
|
182 |
TotArea14,,** No non-empty join mapping for UNUSED#TotArea14 **
|
|
183 |
TotArea15,,** No non-empty join mapping for UNUSED#TotArea15 **
|
|
184 |
TotArea2,,** No non-empty join mapping for UNUSED#TotArea2 **
|
|
185 |
TotArea3,,** No non-empty join mapping for UNUSED#TotArea3 **
|
|
186 |
TotArea4,,** No non-empty join mapping for UNUSED#TotArea4 **
|
|
187 |
TotArea5,,** No non-empty join mapping for UNUSED#TotArea5 **
|
|
188 |
TotArea6,,** No non-empty join mapping for UNUSED#TotArea6 **
|
|
189 |
TotArea7,,** No non-empty join mapping for UNUSED#TotArea7 **
|
|
190 |
TotArea8,,** No non-empty join mapping for UNUSED#TotArea8 **
|
|
191 |
TotArea9,,** No non-empty join mapping for UNUSED#TotArea9 **
|
|
192 |
TreeLeaf3Notes,,** No non-empty join mapping for UNUSED#TreeLeaf3Notes **
|
|
193 |
TreeMortalityNotes,,** No non-empty join mapping for UNUSED#TreeMortalityNotes **
|
|
194 |
TreeTrunkNotes,,** No non-empty join mapping for UNUSED#TreeTrunkNotes **
|
|
195 |
VesselArea,,** No non-empty join mapping for UNUSED#VesselArea **
|
|
196 |
VesselNumber,,** No non-empty join mapping for UNUSED#VesselNumber **
|
|
197 |
Volume1,,** No non-empty join mapping for UNUSED#Volume1 **
|
|
198 |
Volume2,,** No non-empty join mapping for UNUSED#Volume2 **
|
|
199 | 199 |
WasCollected,,** No join mapping for *WasCollected ** |
200 |
Weight1,,** No non-empty join mapping for UNUSED ** |
|
201 |
Weight10,,** No non-empty join mapping for UNUSED ** |
|
202 |
Weight11,,** No non-empty join mapping for UNUSED ** |
|
203 |
Weight12,,** No non-empty join mapping for UNUSED ** |
|
204 |
Weight13,,** No non-empty join mapping for UNUSED ** |
|
205 |
Weight14,,** No non-empty join mapping for UNUSED ** |
|
206 |
Weight15,,** No non-empty join mapping for UNUSED ** |
|
207 |
Weight2,,** No non-empty join mapping for UNUSED ** |
|
208 |
Weight3,,** No non-empty join mapping for UNUSED ** |
|
209 |
Weight4,,** No non-empty join mapping for UNUSED ** |
|
210 |
Weight5,,** No non-empty join mapping for UNUSED ** |
|
211 |
Weight6,,** No non-empty join mapping for UNUSED ** |
|
212 |
Weight7,,** No non-empty join mapping for UNUSED ** |
|
213 |
Weight8,,** No non-empty join mapping for UNUSED ** |
|
214 |
Weight9,,** No non-empty join mapping for UNUSED ** |
|
215 |
WeightOfBranch,,** No non-empty join mapping for UNUSED ** |
|
216 |
WeightRachilla1,,** No non-empty join mapping for UNUSED ** |
|
217 |
WeightRachilla2,,** No non-empty join mapping for UNUSED ** |
|
218 |
WeightRachilla3,,** No non-empty join mapping for UNUSED ** |
|
219 |
WeightRachilla4,,** No non-empty join mapping for UNUSED ** |
|
220 |
WeightRachilla5,,** No non-empty join mapping for UNUSED ** |
|
221 |
WeightRachis1,,** No non-empty join mapping for UNUSED ** |
|
222 |
WeightRachis2,,** No non-empty join mapping for UNUSED ** |
|
223 |
WeightRachis3,,** No non-empty join mapping for UNUSED ** |
|
224 |
WeightRachis4,,** No non-empty join mapping for UNUSED ** |
|
225 |
WeightRachis5,,** No non-empty join mapping for UNUSED ** |
|
226 |
WidthButtresses,,** No non-empty join mapping for UNUSED ** |
|
200 |
Weight1,,** No non-empty join mapping for UNUSED#Weight1 **
|
|
201 |
Weight10,,** No non-empty join mapping for UNUSED#Weight10 **
|
|
202 |
Weight11,,** No non-empty join mapping for UNUSED#Weight11 **
|
|
203 |
Weight12,,** No non-empty join mapping for UNUSED#Weight12 **
|
|
204 |
Weight13,,** No non-empty join mapping for UNUSED#Weight13 **
|
|
205 |
Weight14,,** No non-empty join mapping for UNUSED#Weight14 **
|
|
206 |
Weight15,,** No non-empty join mapping for UNUSED#Weight15 **
|
|
207 |
Weight2,,** No non-empty join mapping for UNUSED#Weight2 **
|
|
208 |
Weight3,,** No non-empty join mapping for UNUSED#Weight3 **
|
|
209 |
Weight4,,** No non-empty join mapping for UNUSED#Weight4 **
|
|
210 |
Weight5,,** No non-empty join mapping for UNUSED#Weight5 **
|
|
211 |
Weight6,,** No non-empty join mapping for UNUSED#Weight6 **
|
|
212 |
Weight7,,** No non-empty join mapping for UNUSED#Weight7 **
|
|
213 |
Weight8,,** No non-empty join mapping for UNUSED#Weight8 **
|
|
214 |
Weight9,,** No non-empty join mapping for UNUSED#Weight9 **
|
|
215 |
WeightOfBranch,,** No non-empty join mapping for UNUSED#WeightOfBranch **
|
|
216 |
WeightRachilla1,,** No non-empty join mapping for UNUSED#WeightRachilla1 **
|
|
217 |
WeightRachilla2,,** No non-empty join mapping for UNUSED#WeightRachilla2 **
|
|
218 |
WeightRachilla3,,** No non-empty join mapping for UNUSED#WeightRachilla3 **
|
|
219 |
WeightRachilla4,,** No non-empty join mapping for UNUSED#WeightRachilla4 **
|
|
220 |
WeightRachilla5,,** No non-empty join mapping for UNUSED#WeightRachilla5 **
|
|
221 |
WeightRachis1,,** No non-empty join mapping for UNUSED#WeightRachis1 **
|
|
222 |
WeightRachis2,,** No non-empty join mapping for UNUSED#WeightRachis2 **
|
|
223 |
WeightRachis3,,** No non-empty join mapping for UNUSED#WeightRachis3 **
|
|
224 |
WeightRachis4,,** No non-empty join mapping for UNUSED#WeightRachis4 **
|
|
225 |
WeightRachis5,,** No non-empty join mapping for UNUSED#WeightRachis5 **
|
|
226 |
WidthButtresses,,** No non-empty join mapping for UNUSED#WidthButtresses **
|
|
227 | 227 |
row_num,,** No join mapping for *row_num ** |
inputs/TEAM/VT/new_terms.csv | ||
---|---|---|
1 | 1 |
Observation Date,eventDate,, |
2 | 2 |
Names of Collectors,recordedBy,, |
3 | 3 |
Diameter,diameterBreastHeight_cm,,"""Tree diameter measurement. {cm}"" (Diameter definition on p. 7 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)" |
4 |
Spatial Method,OMIT,,"Just contains ""Derived"", for 14927 rows" |
|
4 |
Spatial Method,OMIT#Spatial Method,,"Just contains ""Derived"", for 14927 rows"
|
|
5 | 5 |
Subplot Number,subplot,, |
6 | 6 |
1ha Plot X Coordinate,organismX_m,,"""Point of intersection {in the X axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot X Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)" |
7 | 7 |
1ha Plot Y Coordinate,organismY_m,,"""Point of intersection {in the Y axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot Y Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)" |
inputs/CTFS/TaxonOccurrence/map.csv | ||
---|---|---|
13 | 13 |
SubSpeciesName,subspecies,, |
14 | 14 |
SubSpeciesMnemonic,*SubSpeciesMnemonic,, |
15 | 15 |
SubSpeciesAuthority,*SubSpeciesAuthority,, |
16 |
InfraSpecificLevel,UNUSED,, |
|
16 |
InfraSpecificLevel,UNUSED#InfraSpecificLevel,,
|
|
17 | 17 |
SpecificEpithet.src.row_num,*SpecificEpithet.src.row_num,, |
18 | 18 |
SpeciesCurrentTaxonFlag,*SpeciesCurrentTaxonFlag,, |
19 | 19 |
SpeciesObsoleteTaxonFlag,*SpeciesObsoleteTaxonFlag,, |
inputs/CTFS/TaxonOccurrence/VegBIEN.csv | ||
---|---|---|
36 | 36 |
GenusID,,** No join mapping for *GenusID ** |
37 | 37 |
GenusReferenceID,,** No join mapping for *GenusReferenceID ** |
38 | 38 |
IDLevel,,** No join mapping for *IDLevel ** |
39 |
InfraSpecificLevel,,** No non-empty join mapping for UNUSED ** |
|
39 |
InfraSpecificLevel,,** No non-empty join mapping for UNUSED#InfraSpecificLevel **
|
|
40 | 40 |
InfraspecificEpithet.src.row_num,,** No join mapping for *InfraspecificEpithet.src.row_num ** |
41 | 41 |
ReferenceID,,** No join mapping for *ReferenceID ** |
42 | 42 |
SpeciesCurrentTaxonFlag,,** No join mapping for *SpeciesCurrentTaxonFlag ** |
inputs/CTFS/Subplot/map.csv | ||
---|---|---|
2 | 2 |
row_num,*row_num,, |
3 | 3 |
QuadratID,subplot,,Not globally unique; unique only within Site |
4 | 4 |
PlotID,locationID,, |
5 |
QuadratName,OMIT,,QuadratID is used for the same purpose |
|
5 |
QuadratName,OMIT#QuadratName,,QuadratID is used for the same purpose
|
|
6 | 6 |
StartX,subplotX,, |
7 | 7 |
StartY,subplotY,, |
8 | 8 |
DimX,*DimX,, |
inputs/CTFS/Subplot/VegBIEN.csv | ||
---|---|---|
17 | 17 |
StartY,/location/sublocationyposition_m, |
18 | 18 |
DimX,,** No join mapping for *DimX ** |
19 | 19 |
DimY,,** No join mapping for *DimY ** |
20 |
QuadratName,,** No non-empty join mapping for OMIT ** QuadratID is used for the same purpose |
|
20 |
QuadratName,,** No non-empty join mapping for OMIT#QuadratName ** QuadratID is used for the same purpose
|
|
21 | 21 |
row_num,,** No join mapping for *row_num ** |
inputs/TEX/Specimen2/map.csv | ||
---|---|---|
19 | 19 |
LATITUDE,latitude_DMS,, |
20 | 20 |
LONGITUDE,longitude_DMS,, |
21 | 21 |
EXACT DATE,dateCollected,/_alt/1, |
22 |
END DATE,UNUSED,, |
|
22 |
END DATE,UNUSED#END DATE,,
|
|
23 | 23 |
GENERAL DATE,dateCollected,/_alt/2, |
24 | 24 |
COLLECTOR 1 FIRST NAME,recordedBy,/_join/1/_join_words/1, |
25 | 25 |
COLLECTOR 1 LAST NAME,recordedBy,/_join/1/_join_words/2, |
inputs/TEX/Specimen2/VegBIEN.csv | ||
---|---|---|
63 | 63 |
DATABASED BY,,** No join mapping for *DATABASED BY ** |
64 | 64 |
DET NOTES,,** No join mapping for identificationRemarks ** |
65 | 65 |
DETERMINER INSTITUTION,,** No join mapping for *DETERMINER INSTITUTION ** |
66 |
END DATE,,** No non-empty join mapping for UNUSED ** |
|
66 |
END DATE,,** No non-empty join mapping for UNUSED#END DATE **
|
|
67 | 67 |
LATLONG DATUM,,** No join mapping for *LATLONG DATUM ** |
68 | 68 |
LATLONG SOURCE,,** No join mapping for *LATLONG SOURCE ** |
69 | 69 |
SUBSPECIES AUTHOR,,** No join mapping for *SUBSPECIES AUTHOR ** |
inputs/BRIT/specimen_flat/map.csv | ||
---|---|---|
1 | 1 |
BRIT,VegCore,Filter,Comments |
2 | 2 |
specimen_id,dataProviderRecordID,, |
3 | 3 |
Institution_Code,specimenHolderInstitutions,, |
4 |
Global_Unique_Identifier,UNUSED,, |
|
4 |
Global_Unique_Identifier,UNUSED#Global_Unique_Identifier,,
|
|
5 | 5 |
Collector_Abbrev_Name,recordedBy,/_join/1, |
6 | 6 |
Collection_Team,recordedBy,/_join/2, |
7 | 7 |
Collection_Number,collectorNumber,, |
... | ... | |
27 | 27 |
Country_Name,country,, |
28 | 28 |
Region_Name,stateProvince,, |
29 | 29 |
Subregion_Name,county,, |
30 |
Closest_Town,UNUSED,, |
|
30 |
Closest_Town,UNUSED#Closest_Town,,
|
|
31 | 31 |
Research_Site_Name,*Research_Site_Name,, |
32 | 32 |
Project_Name,projectName,, |
33 | 33 |
Locality_Summary,locality,/_join/1, |
... | ... | |
49 | 49 |
Elevation_Min,minimumElevationInMeters,,Assuming units based on the range and precision of values |
50 | 50 |
Elevation_Max,maximumElevationInMeters,,Assuming units based on the range and precision of values |
51 | 51 |
Basis_Of_Specimen,basisOfRecord,, |
52 |
Auxilirary_Collections,UNUSED,, |
|
52 |
Auxilirary_Collections,UNUSED#Auxilirary_Collections,,
|
|
53 | 53 |
Collection_Method,samplingProtocol,, |
54 |
Dubpliate_Herbarium,UNUSED,, |
|
54 |
Dubpliate_Herbarium,UNUSED#Dubpliate_Herbarium,,
|
|
55 | 55 |
Duplicates,*Duplicates,,# of duplicates |
56 |
Type_Specimen,UNUSED,, |
|
56 |
Type_Specimen,UNUSED#Type_Specimen,,
|
|
57 | 57 |
Updated_date,modified,, |
58 | 58 |
Determined_By_Name,identifiedBy,, |
59 | 59 |
Determined_By_Date,dateIdentified,, |
inputs/BRIT/specimen_flat/VegBIEN.csv | ||
---|---|---|
92 | 92 |
Subregion_Name,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2, |
93 | 93 |
Region_Name,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2, |
94 | 94 |
Region_Name,/location/locationplace/*_id/place/stateprovince, |
95 |
Auxilirary_Collections,,** No non-empty join mapping for UNUSED ** |
|
95 |
Auxilirary_Collections,,** No non-empty join mapping for UNUSED#Auxilirary_Collections **
|
|
96 | 96 |
Basis_Of_Specimen,,** No join mapping for basisOfRecord ** |
97 |
Closest_Town,,** No non-empty join mapping for UNUSED ** |
|
98 |
Dubpliate_Herbarium,,** No non-empty join mapping for UNUSED ** |
|
97 |
Closest_Town,,** No non-empty join mapping for UNUSED#Closest_Town **
|
|
98 |
Dubpliate_Herbarium,,** No non-empty join mapping for UNUSED#Dubpliate_Herbarium **
|
|
99 | 99 |
Duplicates,,** No join mapping for *Duplicates ** # of duplicates |
100 |
Global_Unique_Identifier,,** No non-empty join mapping for UNUSED ** |
|
100 |
Global_Unique_Identifier,,** No non-empty join mapping for UNUSED#Global_Unique_Identifier **
|
|
101 | 101 |
Infra_Rank,,** No join mapping for infraspecificRank ** |
102 | 102 |
Local_Name,,** No join mapping for vernacularName ** |
103 | 103 |
Research_Site_Name,,** No join mapping for *Research_Site_Name ** |
104 | 104 |
Soil_Description,,** No join mapping for *Soil_Description ** |
105 | 105 |
Subclass_Name,,** No join mapping for *subclass ** |
106 |
Type_Specimen,,** No non-empty join mapping for UNUSED ** |
|
106 |
Type_Specimen,,** No non-empty join mapping for UNUSED#Type_Specimen **
|
|
107 | 107 |
Updated_date,,** No join mapping for modified ** |
inputs/SALVIAS/plotObservations/map.csv | ||
---|---|---|
29 | 29 |
coll_firstname,recordedBy_givenName,,Brad: See comment above |
30 | 30 |
DetType,voucherType,,"Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
31 | 31 |
det_by,identifiedBy,, |
32 |
fam_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS. |
|
33 |
gen_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS. |
|
34 |
name_status,OMIT,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS." |
|
32 |
fam_status,OMIT#fam_status,,Brad: OMIT. This will be determined later by using TNRS.
|
|
33 |
gen_status,OMIT#gen_status,,Brad: OMIT. This will be determined later by using TNRS.
|
|
34 |
name_status,OMIT#name_status,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
|
|
35 | 35 |
SpAuthStatus,*SpAuthStatus,, |
36 | 36 |
Family,family,, |
37 | 37 |
Genus,genus,, |
inputs/SALVIAS/plotObservations/VegBIEN.csv | ||
---|---|---|
137 | 137 |
collector_code,,** No join mapping for *collector_code ** Brad: OMIT |
138 | 138 |
common_name,,** No join mapping for vernacularName ** |
139 | 139 |
dist,,** No join mapping for *dist ** |
140 |
fam_status,,** No non-empty join mapping for OMIT ** Brad: OMIT. This will be determined later by using TNRS. |
|
141 |
gen_status,,** No non-empty join mapping for OMIT ** Brad: OMIT. This will be determined later by using TNRS. |
|
140 |
fam_status,,** No non-empty join mapping for OMIT#fam_status ** Brad: OMIT. This will be determined later by using TNRS.
|
|
141 |
gen_status,,** No non-empty join mapping for OMIT#gen_status ** Brad: OMIT. This will be determined later by using TNRS.
|
|
142 | 142 |
height_class,,** No join mapping for *height_class ** |
143 | 143 |
height_m_commercial,,** No join mapping for *height_m_commercial ** |
144 | 144 |
ind_id,,** No join mapping for *ind_id ** Brad: OMIT |
145 | 145 |
infra_auth_1,,** No join mapping for *infra_auth_1 ** |
146 | 146 |
morphocf,,** No join mapping for *morphocf ** |
147 |
name_status,,"** No non-empty join mapping for OMIT ** Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS." |
|
147 |
name_status,,"** No non-empty join mapping for OMIT#name_status ** Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
|
|
148 | 148 |
other_annotations,,** No join mapping for *other_annotations ** |
149 | 149 |
perp_dist,,** No join mapping for *perp_dist ** |
150 | 150 |
species_code,,** No join mapping for *species_code ** |
inputs/SALVIAS/plotObservations/new_terms.csv | ||
---|---|---|
18 | 18 |
coll_lastname,recordedBy_surName,,"Brad: This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick." |
19 | 19 |
coll_firstname,recordedBy_givenName,,Brad: See comment above |
20 | 20 |
det_by,identifiedBy,, |
21 |
fam_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS. |
|
22 |
gen_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS. |
|
23 |
name_status,OMIT,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS." |
|
21 |
fam_status,OMIT#fam_status,,Brad: OMIT. This will be determined later by using TNRS.
|
|
22 |
gen_status,OMIT#gen_status,,Brad: OMIT. This will be determined later by using TNRS.
|
|
23 |
name_status,OMIT#name_status,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
|
|
24 | 24 |
auth,scientificNameAuthorship,,Brad: This is the author of the scientificName. |
25 | 25 |
infra_rank_1,taxonRank,, |
26 | 26 |
infra_ep_1,infraspecificEpithet,, |
inputs/SALVIAS/plotMetadata_/map.csv | ||
---|---|---|
1 | 1 |
SALVIAS,VegCore,Filter,Comments |
2 |
MethodCode,OMIT,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod |
|
2 |
MethodCode,OMIT#MethodCode,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
|
|
3 | 3 |
PlotID,locationID,,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata." |
4 | 4 |
orig_filename,*orig_filename,, |
5 | 5 |
AccessCode,accessRights,"/_map:[1=private,2=""metadata only"",3=public]/value","3 plots contain 3 in this field and ""del"" in tmp_del" |
inputs/SALVIAS/plotMetadata_/new_terms.csv | ||
---|---|---|
1 |
MethodCode,OMIT,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod |
|
1 |
MethodCode,OMIT#MethodCode,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
|
|
2 | 2 |
AccessCode,accessRights,"/_map:[1=private,2=""metadata only"",3=public]/value","3 plots contain 3 in this field and ""del"" in tmp_del" |
3 | 3 |
SiteCode,locationName,,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project) |
4 | 4 |
MajorGeo,continent,, |
inputs/U/Specimen/VegBIEN.csv | ||
---|---|---|
58 | 58 |
Alt,,** No join mapping for *Alt ** What is this? |
59 | 59 |
Alt2,,** No join mapping for *Alt2 ** What is this? |
60 | 60 |
Coorsyst,,** No join mapping for *Coorsyst ** |
61 |
DateInfo,,** No non-empty join mapping for UNUSED ** |
|
61 |
DateInfo,,** No non-empty join mapping for UNUSED#DateInfo **
|
|
62 | 62 |
EW,,** No join mapping for *EW ** |
63 | 63 |
Majorarea,,** No join mapping for *Majorarea ** |
64 | 64 |
NS,,** No join mapping for *NS ** |
65 |
Prefix,,** No non-empty join mapping for UNUSED ** |
|
66 |
Suffix,,** No non-empty join mapping for UNUSED ** |
|
65 |
Prefix,,** No non-empty join mapping for UNUSED#Prefix **
|
|
66 |
Suffix,,** No non-empty join mapping for UNUSED#Suffix **
|
|
67 | 67 |
row_num,,** No join mapping for *row_num ** |
inputs/QFA/Specimen/VegBIEN.csv | ||
---|---|---|
90 | 90 |
datasetID,,** No join mapping for datasetURL ** |
91 | 91 |
datasetName,,** No join mapping for dataset ** |
92 | 92 |
geodeticDatum,,** No join mapping for geodeticDatum ** |
93 |
institutionID,,** No non-empty join mapping for UNUSED ** |
|
93 |
institutionID,,** No non-empty join mapping for UNUSED#institutionID **
|
|
94 | 94 |
language,,** No join mapping for language ** |
95 | 95 |
nomenclaturalCode,,** No join mapping for nomenclaturalCode ** |
96 | 96 |
ownerInstitutionCode,,** No join mapping for specimenOwner ** |
inputs/UBC/Specimen/VegBIEN.csv | ||
---|---|---|
95 | 95 |
georeferenceSources,,** No join mapping for georeferenceSources ** |
96 | 96 |
georeferencedBy,,** No join mapping for georeferencedBy ** |
97 | 97 |
georeferencedDate,,** No join mapping for georeferencedDate ** |
98 |
institutionID,,** No non-empty join mapping for UNUSED ** |
|
98 |
institutionID,,** No non-empty join mapping for UNUSED#institutionID **
|
|
99 | 99 |
language,,** No join mapping for language ** |
100 | 100 |
modified,,** No join mapping for modified ** |
101 | 101 |
nomenclaturalCode,,** No join mapping for nomenclaturalCode ** |
inputs/bien_web/observation/map.csv | ||
---|---|---|
51 | 51 |
traitValue,measurementValue,, |
52 | 52 |
traitUnit,*traitUnit,, |
53 | 53 |
traitMethod,*traitMethod,, |
54 |
observationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
55 |
dataSourceID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
56 |
dataSourceName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
57 |
dataSourceNamePrimary_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
58 |
plotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
59 |
observationType_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
60 |
bien2_taxonomyID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
61 |
bien2_DBPlotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
62 |
bien2_ObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
63 |
bien2_OccurID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
64 |
taxonAuthorityVerbatim_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
65 |
higherPlantGroup_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
66 |
family_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
67 |
genus_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
68 |
species_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
69 |
taxon_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
70 |
taxonAuthor_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
71 |
taxonMorphospecies_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
72 |
rank_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
73 |
acceptance_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
74 |
country_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
75 |
stateProvince_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
76 |
collector_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
77 |
identifiedBy_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
78 |
plotCode_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
79 |
plotAreaHa_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
80 |
plotMinDbh_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
81 |
plotMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
82 |
isValidLatLong_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
83 |
isGeovalid_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
84 |
isNewWorld_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
85 |
isCultivated_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
86 |
isCultivatedReason_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
87 |
bien2_TraitObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
88 |
traitName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
89 |
traitMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
90 |
traitUnit_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
|
54 |
observationID_index,OMIT#observationID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
55 |
dataSourceID_index,OMIT#dataSourceID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
56 |
dataSourceName_index,OMIT#dataSourceName_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
57 |
dataSourceNamePrimary_index,OMIT#dataSourceNamePrimary_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
58 |
plotID_index,OMIT#plotID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
59 |
observationType_index,OMIT#observationType_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
60 |
bien2_taxonomyID_index,OMIT#bien2_taxonomyID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
61 |
bien2_DBPlotID_index,OMIT#bien2_DBPlotID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
62 |
bien2_ObservationID_index,OMIT#bien2_ObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
63 |
bien2_OccurID_index,OMIT#bien2_OccurID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
64 |
taxonAuthorityVerbatim_index,OMIT#taxonAuthorityVerbatim_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
65 |
higherPlantGroup_index,OMIT#higherPlantGroup_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
66 |
family_index,OMIT#family_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
67 |
genus_index,OMIT#genus_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
68 |
species_index,OMIT#species_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
69 |
taxon_index,OMIT#taxon_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
70 |
taxonAuthor_index,OMIT#taxonAuthor_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
71 |
taxonMorphospecies_index,OMIT#taxonMorphospecies_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
72 |
rank_index,OMIT#rank_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
73 |
acceptance_index,OMIT#acceptance_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
74 |
country_index,OMIT#country_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
75 |
stateProvince_index,OMIT#stateProvince_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
76 |
collector_index,OMIT#collector_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
77 |
identifiedBy_index,OMIT#identifiedBy_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
78 |
plotCode_index,OMIT#plotCode_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
79 |
plotAreaHa_index,OMIT#plotAreaHa_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
80 |
plotMinDbh_index,OMIT#plotMinDbh_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
81 |
plotMethod_index,OMIT#plotMethod_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
82 |
isValidLatLong_index,OMIT#isValidLatLong_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
83 |
isGeovalid_index,OMIT#isGeovalid_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
84 |
isNewWorld_index,OMIT#isNewWorld_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
85 |
isCultivated_index,OMIT#isCultivated_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
86 |
isCultivatedReason_index,OMIT#isCultivatedReason_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
87 |
bien2_TraitObservationID_index,OMIT#bien2_TraitObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
88 |
traitName_index,OMIT#traitName_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
89 |
traitMethod_index,OMIT#traitMethod_index,,Placeholder column created by MySQL to PostgreSQL translation |
|
90 |
traitUnit_index,OMIT#traitUnit_index,,Placeholder column created by MySQL to PostgreSQL translation |
inputs/NY/Ecatalog_all/map.csv | ||
---|---|---|
1 | 1 |
NY,VegCore,Filter,Comments |
2 |
pkey,OMIT,,"CatalogNumber, etc. is a better pkey" |
|
3 |
key,OMIT,,"CatalogNumber, etc. is a better pkey" |
|
2 |
pkey,OMIT#pkey,,"CatalogNumber, etc. is a better pkey"
|
|
3 |
key,OMIT#key,,"CatalogNumber, etc. is a better pkey"
|
|
4 | 4 |
DateLastModified,modified,, |
5 | 5 |
InstitutionCode,specimenHolderInstitutions,, |
6 | 6 |
CollectionCode,collection,, |
... | ... | |
21 | 21 |
MonthIdentified,monthIdentified,, |
22 | 22 |
DayIdentified,dayIdentified,, |
23 | 23 |
TypeStatus,typeStatus,, |
24 |
CollectorNumber,UNUSED,, |
|
24 |
CollectorNumber,UNUSED#CollectorNumber,,
|
|
25 | 25 |
FieldNumber,collectorNumber,,Usage inconsistent with DwC definition |
26 | 26 |
Collector,recordedBy,, |
27 | 27 |
YearCollected,yearCollected,, |
... | ... | |
53 | 53 |
PlantFungDescription,occurrenceRemarks,/_join/2,Contains the specimenDescription |
54 | 54 |
Substrate,locality,"/_join/2/_label[label=""substrate""]/value", |
55 | 55 |
Vegetation,locality,"/_join/3/_label[label=""vegetation""]/value", |
56 |
UniqueNYInternalRecordNumber,OMIT,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID. |
|
56 |
UniqueNYInternalRecordNumber,OMIT#UniqueNYInternalRecordNumber,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID. |
inputs/Madidi/IndividualObservation/map.csv | ||
---|---|---|
22 | 22 |
CollectorAbbrev,recordedBy,/_first/3, |
23 | 23 |
CurrentDet,scientificName,, |
24 | 24 |
CurrentDetRank,taxonRank,, |
25 |
CurrentDetFamily,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle" |
|
25 |
CurrentDetFamily,OMIT#CurrentDetFamily,,"Omitted because includes *family* author, which TNRS can’t handle"
|
|
26 | 26 |
CurrentDetQualifier,identificationQualifier,, |
27 | 27 |
RepresentativeSpecimenID,*RepresentativeSpecimenID,, |
28 | 28 |
RepresentativeSpecimenSeniorCollector,*RepresentativeSpecimenSeniorCollector,, |
... | ... | |
30 | 30 |
RepresentativeSpecimenCollectorAbbreviation,*RepresentativeSpecimenCollectorAbbreviation,, |
31 | 31 |
FieldFamilyFullName,originalFamily,, |
32 | 32 |
FieldFamilyFullName,family,, |
33 |
FieldFamilyHTML,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle" |
|
33 |
FieldFamilyHTML,OMIT#FieldFamilyHTML,,"Omitted because includes *family* author, which TNRS can’t handle"
|
|
34 | 34 |
FieldNameFullName,originalTaxonName,, |
35 | 35 |
FieldNameAuthors,originalScientificNameAuthorship,, |
36 |
FieldNameHTML,OMIT,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors |
|
36 |
FieldNameHTML,OMIT#FieldNameHTML,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
|
|
37 | 37 |
MorphoSpeciesName,morphoname,, |
38 | 38 |
CommonName,vernacularName,, |
39 | 39 |
Circumference,*Circumference,, |
... | ... | |
53 | 53 |
TreeNotes,occurrenceRemarks,, |
54 | 54 |
DNASample,*DNASample,, |
55 | 55 |
IsAlive,*IsAlive,, |
56 |
CompoundLeaf,UNUSED,, |
|
57 |
CompoundLeafID,UNUSED,, |
|
58 |
NumberFolioles1,UNUSED,, |
|
59 |
NumberFolioles2,UNUSED,, |
|
60 |
NumberFolioles3,UNUSED,, |
|
61 |
NumberFolioles4,UNUSED,, |
|
62 |
NumberFolioles5,UNUSED,, |
|
63 |
SLAArea1,UNUSED,, |
|
64 |
SLAArea2,UNUSED,, |
|
65 |
SLAArea3,UNUSED,, |
|
66 |
SLAArea4,UNUSED,, |
|
67 |
SLAArea5,UNUSED,, |
|
68 |
SLAArea6,UNUSED,, |
|
69 |
SLAArea7,UNUSED,, |
|
70 |
SLAArea8,UNUSED,, |
|
71 |
SLAArea9,UNUSED,, |
|
72 |
SLAArea10,UNUSED,, |
|
73 |
SLAArea11,UNUSED,, |
|
74 |
SLAArea12,UNUSED,, |
|
75 |
SLAArea13,UNUSED,, |
|
76 |
SLAArea14,UNUSED,, |
|
77 |
SLAArea15,UNUSED,, |
|
78 |
NumberFoliolules1,UNUSED,, |
|
79 |
NumberFoliolules2,UNUSED,, |
|
80 |
NumberFoliolules3,UNUSED,, |
|
81 |
NumberFoliolules4,UNUSED,, |
|
82 |
NumberFoliolules5,UNUSED,, |
|
83 |
TotArea1,UNUSED,, |
|
84 |
TotArea2,UNUSED,, |
|
85 |
TotArea3,UNUSED,, |
|
86 |
TotArea4,UNUSED,, |
|
87 |
TotArea5,UNUSED,, |
|
88 |
TotArea6,UNUSED,, |
|
89 |
TotArea7,UNUSED,, |
|
90 |
TotArea8,UNUSED,, |
|
91 |
TotArea9,UNUSED,, |
|
92 |
TotArea10,UNUSED,, |
|
93 |
TotArea11,UNUSED,, |
|
94 |
TotArea12,UNUSED,, |
|
95 |
TotArea13,UNUSED,, |
|
96 |
TotArea14,UNUSED,, |
|
97 |
TotArea15,UNUSED,, |
|
98 |
Weight1,UNUSED,, |
|
99 |
Weight2,UNUSED,, |
|
100 |
Weight3,UNUSED,, |
|
101 |
Weight4,UNUSED,, |
|
102 |
Weight5,UNUSED,, |
|
103 |
Weight6,UNUSED,, |
|
104 |
Weight7,UNUSED,, |
|
105 |
Weight8,UNUSED,, |
|
106 |
Weight9,UNUSED,, |
|
107 |
Weight10,UNUSED,, |
|
108 |
Weight11,UNUSED,, |
|
109 |
Weight12,UNUSED,, |
|
110 |
Weight13,UNUSED,, |
|
111 |
Weight14,UNUSED,, |
|
112 |
Weight15,UNUSED,, |
|
113 |
Thickness1,UNUSED,, |
|
114 |
Thickness2,UNUSED,, |
|
115 |
Thickness3,UNUSED,, |
|
116 |
Thickness4,UNUSED,, |
|
117 |
Thickness5,UNUSED,, |
|
118 |
Thickness6,UNUSED,, |
|
119 |
Thickness7,UNUSED,, |
|
120 |
Thickness8,UNUSED,, |
|
121 |
Thickness9,UNUSED,, |
|
122 |
Thickness10,UNUSED,, |
|
123 |
Thickness11,UNUSED,, |
|
124 |
Thickness12,UNUSED,, |
|
125 |
Thickness13,UNUSED,, |
|
126 |
Thickness14,UNUSED,, |
|
127 |
Thickness15,UNUSED,, |
|
128 |
LeafPhoto1,UNUSED,, |
|
129 |
LeafPhoto2,UNUSED,, |
|
130 |
LeafPhoto3,UNUSED,, |
|
131 |
LeafPhoto4,UNUSED,, |
|
132 |
LeafPhoto5,UNUSED,, |
|
133 |
NitrogenContent,UNUSED,, |
|
134 |
TreeLeaf3Notes,UNUSED,, |
|
135 |
AreaRachis1,UNUSED,, |
|
136 |
AreaRachis2,UNUSED,, |
|
137 |
AreaRachis3,UNUSED,, |
|
138 |
AreaRachis4,UNUSED,, |
|
139 |
AreaRachis5,UNUSED,, |
|
140 |
WeightRachis1,UNUSED,, |
|
141 |
WeightRachis2,UNUSED,, |
|
142 |
WeightRachis3,UNUSED,, |
|
143 |
WeightRachis4,UNUSED,, |
|
144 |
WeightRachis5,UNUSED,, |
|
145 |
RachisPhoto1,UNUSED,, |
|
146 |
RachisPhoto2,UNUSED,, |
|
147 |
RachisPhoto3,UNUSED,, |
|
148 |
RachisPhoto4,UNUSED,, |
|
149 |
RachisPhoto5,UNUSED,, |
|
150 |
DiameterWithBark,UNUSED,, |
|
151 |
DiameterWithoutBark,UNUSED,, |
|
152 |
Volume1,UNUSED,, |
|
153 |
Volume2,UNUSED,, |
|
154 |
DryWeight,UNUSED,, |
|
155 |
VesselNumber,UNUSED,, |
|
156 |
VesselArea,UNUSED,, |
|
157 |
NumberOfLeaves,UNUSED,, |
|
158 |
WeightOfBranch,UNUSED,, |
|
159 |
AreaRachilla1,UNUSED,, |
|
160 |
AreaRachilla2,UNUSED,, |
|
161 |
AreaRachilla3,UNUSED,, |
|
162 |
AreaRachilla4,UNUSED,, |
|
163 |
AreaRachilla5,UNUSED,, |
|
164 |
WeightRachilla1,UNUSED,, |
|
165 |
WeightRachilla2,UNUSED,, |
|
166 |
WeightRachilla3,UNUSED,, |
|
167 |
WeightRachilla4,UNUSED,, |
|
168 |
WeightRachilla5,UNUSED,, |
|
169 |
TreeTrunkNotes,UNUSED,, |
|
170 |
RemainingTrunkHeight,UNUSED,, |
|
171 |
HeightButtresses,UNUSED,, |
|
172 |
WidthButtresses,UNUSED,, |
|
173 |
DirectionOfFall,UNUSED,, |
|
174 |
MortalityType,UNUSED,, |
|
175 |
CauseOfDeath1,UNUSED,, |
|
176 |
CauseOfDeath2,UNUSED,, |
|
177 |
CauseOfDeath3,UNUSED,, |
|
178 |
CauseOfDeath4,UNUSED,, |
|
179 |
CauseOfDeath5,UNUSED,, |
|
180 |
Decomposition,UNUSED,, |
|
181 |
MultipleFalls,UNUSED,, |
|
182 |
TreeMortalityNotes,UNUSED,, |
|
56 |
CompoundLeaf,UNUSED#CompoundLeaf,, |
|
57 |
CompoundLeafID,UNUSED#CompoundLeafID,, |
|
58 |
NumberFolioles1,UNUSED#NumberFolioles1,, |
|
59 |
NumberFolioles2,UNUSED#NumberFolioles2,, |
|
60 |
NumberFolioles3,UNUSED#NumberFolioles3,, |
|
61 |
NumberFolioles4,UNUSED#NumberFolioles4,, |
|
62 |
NumberFolioles5,UNUSED#NumberFolioles5,, |
|
63 |
SLAArea1,UNUSED#SLAArea1,, |
|
64 |
SLAArea2,UNUSED#SLAArea2,, |
|
65 |
SLAArea3,UNUSED#SLAArea3,, |
|
66 |
SLAArea4,UNUSED#SLAArea4,, |
|
67 |
SLAArea5,UNUSED#SLAArea5,, |
|
68 |
SLAArea6,UNUSED#SLAArea6,, |
|
69 |
SLAArea7,UNUSED#SLAArea7,, |
|
70 |
SLAArea8,UNUSED#SLAArea8,, |
|
71 |
SLAArea9,UNUSED#SLAArea9,, |
|
72 |
SLAArea10,UNUSED#SLAArea10,, |
|
73 |
SLAArea11,UNUSED#SLAArea11,, |
|
74 |
SLAArea12,UNUSED#SLAArea12,, |
|
75 |
SLAArea13,UNUSED#SLAArea13,, |
|
76 |
SLAArea14,UNUSED#SLAArea14,, |
|
77 |
SLAArea15,UNUSED#SLAArea15,, |
|
78 |
NumberFoliolules1,UNUSED#NumberFoliolules1,, |
|
79 |
NumberFoliolules2,UNUSED#NumberFoliolules2,, |
|
80 |
NumberFoliolules3,UNUSED#NumberFoliolules3,, |
|
81 |
NumberFoliolules4,UNUSED#NumberFoliolules4,, |
|
82 |
NumberFoliolules5,UNUSED#NumberFoliolules5,, |
|
83 |
TotArea1,UNUSED#TotArea1,, |
|
84 |
TotArea2,UNUSED#TotArea2,, |
|
85 |
TotArea3,UNUSED#TotArea3,, |
|
86 |
TotArea4,UNUSED#TotArea4,, |
|
87 |
TotArea5,UNUSED#TotArea5,, |
|
88 |
TotArea6,UNUSED#TotArea6,, |
|
89 |
TotArea7,UNUSED#TotArea7,, |
|
90 |
TotArea8,UNUSED#TotArea8,, |
|
91 |
TotArea9,UNUSED#TotArea9,, |
|
92 |
TotArea10,UNUSED#TotArea10,, |
|
93 |
TotArea11,UNUSED#TotArea11,, |
|
94 |
TotArea12,UNUSED#TotArea12,, |
|
95 |
TotArea13,UNUSED#TotArea13,, |
|
96 |
TotArea14,UNUSED#TotArea14,, |
|
97 |
TotArea15,UNUSED#TotArea15,, |
|
98 |
Weight1,UNUSED#Weight1,, |
|
99 |
Weight2,UNUSED#Weight2,, |
|
100 |
Weight3,UNUSED#Weight3,, |
|
101 |
Weight4,UNUSED#Weight4,, |
|
102 |
Weight5,UNUSED#Weight5,, |
|
103 |
Weight6,UNUSED#Weight6,, |
|
104 |
Weight7,UNUSED#Weight7,, |
|
105 |
Weight8,UNUSED#Weight8,, |
|
106 |
Weight9,UNUSED#Weight9,, |
|
107 |
Weight10,UNUSED#Weight10,, |
|
108 |
Weight11,UNUSED#Weight11,, |
|
109 |
Weight12,UNUSED#Weight12,, |
|
110 |
Weight13,UNUSED#Weight13,, |
|
111 |
Weight14,UNUSED#Weight14,, |
|
112 |
Weight15,UNUSED#Weight15,, |
|
113 |
Thickness1,UNUSED#Thickness1,, |
|
114 |
Thickness2,UNUSED#Thickness2,, |
|
115 |
Thickness3,UNUSED#Thickness3,, |
|
116 |
Thickness4,UNUSED#Thickness4,, |
|
117 |
Thickness5,UNUSED#Thickness5,, |
|
118 |
Thickness6,UNUSED#Thickness6,, |
|
119 |
Thickness7,UNUSED#Thickness7,, |
|
120 |
Thickness8,UNUSED#Thickness8,, |
|
121 |
Thickness9,UNUSED#Thickness9,, |
|
122 |
Thickness10,UNUSED#Thickness10,, |
|
123 |
Thickness11,UNUSED#Thickness11,, |
|
124 |
Thickness12,UNUSED#Thickness12,, |
|
125 |
Thickness13,UNUSED#Thickness13,, |
|
126 |
Thickness14,UNUSED#Thickness14,, |
|
127 |
Thickness15,UNUSED#Thickness15,, |
|
128 |
LeafPhoto1,UNUSED#LeafPhoto1,, |
|
129 |
LeafPhoto2,UNUSED#LeafPhoto2,, |
|
130 |
LeafPhoto3,UNUSED#LeafPhoto3,, |
|
131 |
LeafPhoto4,UNUSED#LeafPhoto4,, |
|
132 |
LeafPhoto5,UNUSED#LeafPhoto5,, |
|
133 |
NitrogenContent,UNUSED#NitrogenContent,, |
|
134 |
TreeLeaf3Notes,UNUSED#TreeLeaf3Notes,, |
|
135 |
AreaRachis1,UNUSED#AreaRachis1,, |
|
136 |
AreaRachis2,UNUSED#AreaRachis2,, |
|
137 |
AreaRachis3,UNUSED#AreaRachis3,, |
|
138 |
AreaRachis4,UNUSED#AreaRachis4,, |
|
139 |
AreaRachis5,UNUSED#AreaRachis5,, |
|
140 |
WeightRachis1,UNUSED#WeightRachis1,, |
|
141 |
WeightRachis2,UNUSED#WeightRachis2,, |
|
142 |
WeightRachis3,UNUSED#WeightRachis3,, |
|
143 |
WeightRachis4,UNUSED#WeightRachis4,, |
|
144 |
WeightRachis5,UNUSED#WeightRachis5,, |
|
145 |
RachisPhoto1,UNUSED#RachisPhoto1,, |
|
146 |
RachisPhoto2,UNUSED#RachisPhoto2,, |
|
147 |
RachisPhoto3,UNUSED#RachisPhoto3,, |
|
148 |
RachisPhoto4,UNUSED#RachisPhoto4,, |
|
149 |
RachisPhoto5,UNUSED#RachisPhoto5,, |
|
150 |
DiameterWithBark,UNUSED#DiameterWithBark,, |
|
151 |
DiameterWithoutBark,UNUSED#DiameterWithoutBark,, |
|
152 |
Volume1,UNUSED#Volume1,, |
|
153 |
Volume2,UNUSED#Volume2,, |
|
154 |
DryWeight,UNUSED#DryWeight,, |
|
155 |
VesselNumber,UNUSED#VesselNumber,, |
|
156 |
VesselArea,UNUSED#VesselArea,, |
|
157 |
NumberOfLeaves,UNUSED#NumberOfLeaves,, |
|
158 |
WeightOfBranch,UNUSED#WeightOfBranch,, |
|
159 |
AreaRachilla1,UNUSED#AreaRachilla1,, |
|
160 |
AreaRachilla2,UNUSED#AreaRachilla2,, |
|
161 |
AreaRachilla3,UNUSED#AreaRachilla3,, |
|
162 |
AreaRachilla4,UNUSED#AreaRachilla4,, |
|
163 |
AreaRachilla5,UNUSED#AreaRachilla5,, |
|
164 |
WeightRachilla1,UNUSED#WeightRachilla1,, |
|
165 |
WeightRachilla2,UNUSED#WeightRachilla2,, |
|
166 |
WeightRachilla3,UNUSED#WeightRachilla3,, |
|
167 |
WeightRachilla4,UNUSED#WeightRachilla4,, |
|
168 |
WeightRachilla5,UNUSED#WeightRachilla5,, |
|
169 |
TreeTrunkNotes,UNUSED#TreeTrunkNotes,, |
|
170 |
RemainingTrunkHeight,UNUSED#RemainingTrunkHeight,, |
|
171 |
HeightButtresses,UNUSED#HeightButtresses,, |
|
172 |
WidthButtresses,UNUSED#WidthButtresses,, |
|
173 |
DirectionOfFall,UNUSED#DirectionOfFall,, |
|
174 |
MortalityType,UNUSED#MortalityType,, |
|
175 |
CauseOfDeath1,UNUSED#CauseOfDeath1,, |
|
176 |
CauseOfDeath2,UNUSED#CauseOfDeath2,, |
|
177 |
CauseOfDeath3,UNUSED#CauseOfDeath3,, |
|
178 |
CauseOfDeath4,UNUSED#CauseOfDeath4,, |
|
179 |
CauseOfDeath5,UNUSED#CauseOfDeath5,, |
|
180 |
Decomposition,UNUSED#Decomposition,, |
|
181 |
MultipleFalls,UNUSED#MultipleFalls,, |
|
182 |
TreeMortalityNotes,UNUSED#TreeMortalityNotes,, |
inputs/Madidi/map.csv | ||
---|---|---|
29 | 29 |
CollectorStringShortened,recordedBy,/_first/2, |
30 | 30 |
Conductividad electrica (ASPT 6–µS/cm– 1 - 10000),conductivity,, |
31 | 31 |
CurrentDet,scientificName,, |
32 |
CurrentDetFamily,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle" |
|
32 |
CurrentDetFamily,OMIT#CurrentDetFamily,,"Omitted because includes *family* author, which TNRS can’t handle"
|
|
33 | 33 |
CurrentDetQualifier,identificationQualifier,, |
34 | 34 |
CurrentDetRank,taxonRank,, |
35 | 35 |
Determined by,identifiedBy,, |
... | ... | |
43 | 43 |
Field family,originalFamily,, |
44 | 44 |
Field name,originalGenus,,Often = Genera |
45 | 45 |
FieldFamilyFullName,originalFamily,, |
46 |
FieldFamilyHTML,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle" |
|
46 |
FieldFamilyHTML,OMIT#FieldFamilyHTML,,"Omitted because includes *family* author, which TNRS can’t handle"
|
|
47 | 47 |
FieldNameAuthors,originalScientificNameAuthorship,, |
48 | 48 |
FieldNameFullName,originalTaxonName,, |
49 |
FieldNameHTML,OMIT,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors |
|
49 |
FieldNameHTML,OMIT#FieldNameHTML,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
|
|
50 | 50 |
First evaluation,eventDate,, |
51 | 51 |
Fósforo disponible (ISRIC 14-2–mg/Kg–1.5),phosphorus_percent,,Assuming units are % based on the range of values |
52 | 52 |
Genera,genus,, |
inputs/CVS/stemCount_/VegBIEN.csv | ||
---|---|---|
32 | 32 |
stemHeightAccuracy,,** No join mapping for *stemheightaccuracy ** |
33 | 33 |
stemTaxonArea,,** No join mapping for *stemtaxonarea ** |
34 | 34 |
stratum_ID,,** No join mapping for *stratum_id ** |
35 |
taxonImportance_ID,,** No non-empty join mapping for OMIT ** Omitted because STEMCOUNT_ID is more specific |
Also available in: Unified diff
inputs/*/*/map.csv: added distinguishing #... suffix (e.g. UNUSED#institutionID) to the special terms OMIT, PRIVATE, UNUSED (VegCore.vegpath.org#Special-terms) to avoid creating a collision in the staging table renaming