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Revision 10257

inputs/*/*/map.csv: added distinguishing #... suffix (e.g. UNUSED#institutionID) to the special terms OMIT, PRIVATE, UNUSED (VegCore.vegpath.org#Special-terms) to avoid creating a collision in the staging table renaming

View differences:

inputs/HIBG/Specimen/VegBIEN.csv
95 95
georeferenceVerificationStatus,,** No join mapping for georeferenceVerificationStatus ** 
96 96
identificationRemarks,,** No join mapping for identificationRemarks ** 
97 97
informationWithheld,,** No join mapping for informationWithheld ** 
98
institutionID,,** No non-empty join mapping for UNUSED ** 
98
institutionID,,** No non-empty join mapping for UNUSED#institutionID ** 
99 99
language,,** No join mapping for language ** 
100 100
modified,,** No join mapping for modified ** 
101 101
municipality,,** No join mapping for municipality ** 
inputs/bien_web/observation/new_terms.csv
9 9
isCultivated,cultivated,,
10 10
isCultivatedReason,cultivatedBasis,,
11 11
pctCover,coverPercent,,
12
observationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
13
dataSourceID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
14
dataSourceName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
15
dataSourceNamePrimary_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
16
plotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
17
observationType_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
18
bien2_taxonomyID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
19
bien2_DBPlotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
20
bien2_ObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
21
bien2_OccurID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
22
taxonAuthorityVerbatim_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
23
higherPlantGroup_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
24
family_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
25
genus_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
26
species_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
27
taxon_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
28
taxonAuthor_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
29
taxonMorphospecies_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
30
rank_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
31
acceptance_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
32
country_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
33
stateProvince_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
34
collector_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
35
identifiedBy_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
36
plotCode_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
37
plotAreaHa_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
38
plotMinDbh_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
39
plotMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
40
isValidLatLong_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
41
isGeovalid_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
42
isNewWorld_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
43
isCultivated_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
44
isCultivatedReason_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
45
bien2_TraitObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
46
traitName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
47
traitMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
48
traitUnit_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
12
observationID_index,OMIT#observationID_index,,Placeholder column created by MySQL to PostgreSQL translation
13
dataSourceID_index,OMIT#dataSourceID_index,,Placeholder column created by MySQL to PostgreSQL translation
14
dataSourceName_index,OMIT#dataSourceName_index,,Placeholder column created by MySQL to PostgreSQL translation
15
dataSourceNamePrimary_index,OMIT#dataSourceNamePrimary_index,,Placeholder column created by MySQL to PostgreSQL translation
16
plotID_index,OMIT#plotID_index,,Placeholder column created by MySQL to PostgreSQL translation
17
observationType_index,OMIT#observationType_index,,Placeholder column created by MySQL to PostgreSQL translation
18
bien2_taxonomyID_index,OMIT#bien2_taxonomyID_index,,Placeholder column created by MySQL to PostgreSQL translation
19
bien2_DBPlotID_index,OMIT#bien2_DBPlotID_index,,Placeholder column created by MySQL to PostgreSQL translation
20
bien2_ObservationID_index,OMIT#bien2_ObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation
21
bien2_OccurID_index,OMIT#bien2_OccurID_index,,Placeholder column created by MySQL to PostgreSQL translation
22
taxonAuthorityVerbatim_index,OMIT#taxonAuthorityVerbatim_index,,Placeholder column created by MySQL to PostgreSQL translation
23
higherPlantGroup_index,OMIT#higherPlantGroup_index,,Placeholder column created by MySQL to PostgreSQL translation
24
family_index,OMIT#family_index,,Placeholder column created by MySQL to PostgreSQL translation
25
genus_index,OMIT#genus_index,,Placeholder column created by MySQL to PostgreSQL translation
26
species_index,OMIT#species_index,,Placeholder column created by MySQL to PostgreSQL translation
27
taxon_index,OMIT#taxon_index,,Placeholder column created by MySQL to PostgreSQL translation
28
taxonAuthor_index,OMIT#taxonAuthor_index,,Placeholder column created by MySQL to PostgreSQL translation
29
taxonMorphospecies_index,OMIT#taxonMorphospecies_index,,Placeholder column created by MySQL to PostgreSQL translation
30
rank_index,OMIT#rank_index,,Placeholder column created by MySQL to PostgreSQL translation
31
acceptance_index,OMIT#acceptance_index,,Placeholder column created by MySQL to PostgreSQL translation
32
country_index,OMIT#country_index,,Placeholder column created by MySQL to PostgreSQL translation
33
stateProvince_index,OMIT#stateProvince_index,,Placeholder column created by MySQL to PostgreSQL translation
34
collector_index,OMIT#collector_index,,Placeholder column created by MySQL to PostgreSQL translation
35
identifiedBy_index,OMIT#identifiedBy_index,,Placeholder column created by MySQL to PostgreSQL translation
36
plotCode_index,OMIT#plotCode_index,,Placeholder column created by MySQL to PostgreSQL translation
37
plotAreaHa_index,OMIT#plotAreaHa_index,,Placeholder column created by MySQL to PostgreSQL translation
38
plotMinDbh_index,OMIT#plotMinDbh_index,,Placeholder column created by MySQL to PostgreSQL translation
39
plotMethod_index,OMIT#plotMethod_index,,Placeholder column created by MySQL to PostgreSQL translation
40
isValidLatLong_index,OMIT#isValidLatLong_index,,Placeholder column created by MySQL to PostgreSQL translation
41
isGeovalid_index,OMIT#isGeovalid_index,,Placeholder column created by MySQL to PostgreSQL translation
42
isNewWorld_index,OMIT#isNewWorld_index,,Placeholder column created by MySQL to PostgreSQL translation
43
isCultivated_index,OMIT#isCultivated_index,,Placeholder column created by MySQL to PostgreSQL translation
44
isCultivatedReason_index,OMIT#isCultivatedReason_index,,Placeholder column created by MySQL to PostgreSQL translation
45
bien2_TraitObservationID_index,OMIT#bien2_TraitObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation
46
traitName_index,OMIT#traitName_index,,Placeholder column created by MySQL to PostgreSQL translation
47
traitMethod_index,OMIT#traitMethod_index,,Placeholder column created by MySQL to PostgreSQL translation
48
traitUnit_index,OMIT#traitUnit_index,,Placeholder column created by MySQL to PostgreSQL translation
inputs/NY/Ecatalog_all/new_terms.csv
1
pkey,OMIT,,"CatalogNumber, etc. is a better pkey"
2
key,OMIT,,"CatalogNumber, etc. is a better pkey"
1
pkey,OMIT#pkey,,"CatalogNumber, etc. is a better pkey"
2
key,OMIT#key,,"CatalogNumber, etc. is a better pkey"
3 3
PlantFungDescription,occurrenceRemarks,/_join/2,Contains the specimenDescription
4 4
Substrate,locality,"/_join/2/_label[label=""substrate""]/value",
5 5
Vegetation,locality,"/_join/3/_label[label=""vegetation""]/value",
6
UniqueNYInternalRecordNumber,OMIT,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID.
6
UniqueNYInternalRecordNumber,OMIT#UniqueNYInternalRecordNumber,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID.
inputs/Madidi/IndividualObservation/new_terms.csv
10 10
CollectorAbbrev,recordedBy,/_first/3,
11 11
CurrentDet,scientificName,,
12 12
CurrentDetRank,taxonRank,,
13
CurrentDetFamily,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle"
13
CurrentDetFamily,OMIT#CurrentDetFamily,,"Omitted because includes *family* author, which TNRS can’t handle"
14 14
CurrentDetQualifier,identificationQualifier,,
15 15
FieldFamilyFullName,originalFamily,,
16 16
FieldFamilyFullName,family,,
17
FieldFamilyHTML,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle"
17
FieldFamilyHTML,OMIT#FieldFamilyHTML,,"Omitted because includes *family* author, which TNRS can’t handle"
18 18
FieldNameFullName,originalTaxonName,,
19 19
FieldNameAuthors,originalScientificNameAuthorship,,
20
FieldNameHTML,OMIT,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
20
FieldNameHTML,OMIT#FieldNameHTML,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
21 21
MorphoSpeciesName,morphoname,,
22 22
Diameter,diameterBreastHeight_cm,,
23 23
TotalHeight,height_m,,
inputs/HVAA/Specimen/map.csv
30 30
endDayOfYear,endDayOfYear,,
31 31
verbatimEventDate,verbatimEventDate,,
32 32
habitat,habitat,,
33
fieldNotes,UNUSED,,
33
fieldNotes,UNUSED#fieldNotes,,
34 34
fieldNumber,collectorNumber,,
35 35
occurrenceRemarks,occurrenceRemarks,/_merge/1,
36 36
dynamicProperties,occurrenceRemarks,/_merge/2,Contains occurrenceRemarks data
......
52 52
geodeticDatum,geodeticDatum,,
53 53
coordinateUncertaintyInMeters,coordinateUncertaintyInMeters,,
54 54
footprintWKT,footprintWKT,,
55
coordinatePrecision,UNUSED,,
55
coordinatePrecision,UNUSED#coordinatePrecision,,
56 56
locationRemarks,locationRemarks,,
57 57
verbatimCoordinates,verbatimCoordinates,,
58 58
verbatimCoordinateSystem,coordinateUnits,,
inputs/HVAA/Specimen/VegBIEN.csv
101 101
verbatimElevation,/location/verbatimelevation,
102 102
associatedTaxa,,** No join mapping for associatedTaxa ** 
103 103
basisOfRecord,,** No join mapping for basisOfRecord ** 
104
coordinatePrecision,,** No non-empty join mapping for UNUSED ** 
104
coordinatePrecision,,** No non-empty join mapping for UNUSED#coordinatePrecision ** 
105 105
day,,** No join mapping for day ** 
106 106
disposition,,** No join mapping for disposition ** 
107 107
endDayOfYear,,** No join mapping for endDayOfYear ** 
108
fieldNotes,,** No non-empty join mapping for UNUSED ** 
108
fieldNotes,,** No non-empty join mapping for UNUSED#fieldNotes ** 
109 109
geodeticDatum,,** No join mapping for geodeticDatum ** 
110 110
georeferenceProtocol,,** No join mapping for georeferenceProtocol ** 
111 111
georeferenceRemarks,,** No join mapping for georeferenceRemarks ** 
inputs/XAL/Specimen/map.csv
21 21
darwin:DayIdentified,dayIdentified,,
22 22
darwin:TypeStatus,typeStatus,,
23 23
darwin:CollectorNumber,collectorNumber,,
24
darwin:FieldNumber,UNUSED,,This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber).
24
darwin:FieldNumber,UNUSED#darwin:FieldNumber,,This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber).
25 25
darwin:Collector,recordedBy,,
26 26
darwin:YearCollected,yearCollected,,
27 27
darwin:MonthCollected,monthCollected,,
......
35 35
darwin:Locality,locality,,
36 36
darwin:Longitude,decimalLongitude,,
37 37
darwin:Latitude,decimalLatitude,,
38
darwin:CoordinatePrecision,UNUSED,,
38
darwin:CoordinatePrecision,UNUSED#darwin:CoordinatePrecision,,
39 39
darwin:MinimumElevation,minimumElevationInMeters,,
40 40
darwin:MaximumElevation,maximumElevationInMeters,,
41 41
darwin:MinimumDepth,minimumDepthInMeters,,
inputs/XAL/Specimen/VegBIEN.csv
70 70
darwin:StateProvince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
71 71
darwin:StateProvince,/location/locationplace/*_id/place/stateprovince,
72 72
darwin:BasisOfRecord,,** No join mapping for basisOfRecord ** 
73
darwin:CoordinatePrecision,,** No non-empty join mapping for UNUSED ** 
73
darwin:CoordinatePrecision,,** No non-empty join mapping for UNUSED#darwin:CoordinatePrecision ** 
74 74
darwin:DateLastModified,,** No join mapping for modified ** 
75
darwin:FieldNumber,,** No non-empty join mapping for UNUSED ** This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber).
75
darwin:FieldNumber,,** No non-empty join mapping for UNUSED#darwin:FieldNumber ** This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber).
76 76
darwin:JulianDay,,** No join mapping for day ** 
77 77
darwin:PreparationType,,** No join mapping for preparations ** 
78 78
darwin:PreviousCatalogNumber,,** No join mapping for otherCatalogNumbers ** 
inputs/NCU/Specimen/map.csv
12 12
CurrentScientificNameWithAuthor,scientificName,,
13 13
TypeStatus,typeStatus,,
14 14
CollectionDate,dateCollected,,
15
BarCode,OMIT,,"Omitted because this isn't specified on all rows, but SpecimenPK is"
15
BarCode,OMIT#BarCode,,"Omitted because this isn't specified on all rows, but SpecimenPK is"
16 16
CatalogNumber,accessionNumber,,
17 17
CatalogSeriesPrefix,specimenHolderInstitutions,/_alt/1,
18 18
Description,occurrenceRemarks,,
inputs/NCU/Specimen/VegBIEN.csv
58 58
county,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,
59 59
State,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
60 60
State,/location/locationplace/*_id/place/stateprovince,
61
BarCode,,"** No non-empty join mapping for OMIT ** Omitted because this isn't specified on all rows, but SpecimenPK is"
61
BarCode,,"** No non-empty join mapping for OMIT#BarCode ** Omitted because this isn't specified on all rows, but SpecimenPK is"
62 62
BlockLocationReason,,** No join mapping for *BlockLocationReason ** 
63 63
BlockSpecificLocation,,** No join mapping for *BlockSpecificLocation ** 
64 64
CollectionObjectID,,** No join mapping for *CollectionObjectID ** 
inputs/bien2_traits/TraitObservation/map.csv
1 1
bien2_traits,VegCore,Filter,Comments
2 2
TraitObservationID,occurrenceID,,
3
TaxonomyID,UNUSED,,Always 0
3
TaxonomyID,UNUSED#TaxonomyID,,Always 0
4 4
Family,family,,
5 5
Genus,genus,,
6 6
SpecificEpithet,specificEpithet,,
inputs/bien2_traits/TraitObservation/VegBIEN.csv
56 56
Region,,** No join mapping for *Region ** 
57 57
SourceCitation,,** No join mapping for *SourceCitation ** 
58 58
SourceID,,** No join mapping for *SourceID ** 
59
TaxonomyID,,** No non-empty join mapping for UNUSED ** Always 0
59
TaxonomyID,,** No non-empty join mapping for UNUSED#TaxonomyID ** Always 0
60 60
URLSource,,** No join mapping for *URLSource ** 
61 61
VisitingDate,,** No join mapping for *VisitingDate ** 
inputs/TEAM/VL/map.csv
17 17
Sampling Unit Name,*Sampling Unit Name,,
18 18
Latitude,decimalLatitude,,
19 19
Longitude,decimalLongitude,,
20
Method,OMIT,,"Just contains ""Derived"", for 357 rows"
20
Method,OMIT#Method,,"Just contains ""Derived"", for 357 rows"
21 21
Subplot Number,subplot,,
22 22
1ha Plot X Coordinate,organismX_m,,"""Point of intersection {in the X axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot X Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
23 23
1ha Plot Y Coordinate,organismY_m,,"""Point of intersection {in the Y axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot Y Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
inputs/TEAM/VL/VegBIEN.csv
50 50
Location Codes,,** No join mapping for *Location Codes ** 
51 51
Max Diameter,,** No join mapping for *Max Diameter ** 
52 52
Max Diameter POM,,** No join mapping for *Max Diameter POM ** 
53
Method,,"** No non-empty join mapping for OMIT ** Just contains ""Derived"", for 357 rows"
53
Method,,"** No non-empty join mapping for OMIT#Method ** Just contains ""Derived"", for 357 rows"
54 54
Protocol Version,,** No join mapping for *Protocol Version ** 
55 55
Sampling Period,,** No join mapping for *Sampling Period ** 
56 56
Sampling Unit Name,,** No join mapping for *Sampling Unit Name ** 
inputs/TEAM/VT/map.csv
17 17
Sampling Unit Name,*Sampling Unit Name,,
18 18
Latitude,decimalLatitude,,
19 19
Longitude,decimalLongitude,,
20
Spatial Method,OMIT,,"Just contains ""Derived"", for 14927 rows"
20
Spatial Method,OMIT#Spatial Method,,"Just contains ""Derived"", for 14927 rows"
21 21
Subplot Number,subplot,,
22 22
1ha Plot X Coordinate,organismX_m,,"""Point of intersection {in the X axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot X Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
23 23
1ha Plot Y Coordinate,organismY_m,,"""Point of intersection {in the Y axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot Y Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
inputs/TEAM/VT/VegBIEN.csv
53 53
Protocol Version,,** No join mapping for *Protocol Version ** 
54 54
Sampling Period,,** No join mapping for *Sampling Period ** 
55 55
Sampling Unit Name,,** No join mapping for *Sampling Unit Name ** 
56
Spatial Method,,"** No non-empty join mapping for OMIT ** Just contains ""Derived"", for 14927 rows"
56
Spatial Method,,"** No non-empty join mapping for OMIT#Spatial Method ** Just contains ""Derived"", for 14927 rows"
57 57
row_num,,** No join mapping for *row_num ** 
inputs/SALVIAS/plotMetadata_/VegBIEN.csv
69 69
PlotID,"/location/sourceaccessioncode/_first/2/_if[@name=""if locationID""]/cond/_exists","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
70 70
PlotID,"/location/sourceaccessioncode/_first/2/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/then/_join/1","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
71 71
ElevSource,,** No join mapping for *ElevSource ** 
72
MethodCode,,** No non-empty join mapping for OMIT ** Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
72
MethodCode,,** No non-empty join mapping for OMIT#MethodCode ** Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
73 73
PrecipSource,,** No join mapping for *PrecipSource ** 
74 74
PrimOwnerID,,** No join mapping for *PrimOwnerID ** 
75 75
RevisionComments,,** No join mapping for *RevisionComments ** 
inputs/U/Specimen/map.csv
3 3
ID,dataProviderRecordID,,
4 4
Barcode,accessionNumber,,
5 5
Collector,recordedBy,/_join/1,
6
Prefix,UNUSED,,
6
Prefix,UNUSED#Prefix,,
7 7
Number,collectorNumber,,
8
Suffix,UNUSED,,
8
Suffix,UNUSED#Suffix,,
9 9
Addcoll,recordedBy,/_join/2,
10 10
Colldd,dayCollected,,
11 11
Collmm,monthCollected,,
12 12
Collyy,yearCollected,,
13
DateInfo,UNUSED,,
13
DateInfo,UNUSED#DateInfo,,
14 14
Family,family,,
15 15
Genus,genus,,
16 16
cf,identificationQualifier,,
inputs/QFA/Specimen/map.csv
5 5
recordNumber,collectorNumber,,
6 6
family,family,,
7 7
associatedSequences,associatedSequences,,
8
institutionID,UNUSED,,
8
institutionID,UNUSED#institutionID,,
9 9
specificEpithet,specificEpithet,,
10 10
datasetName,dataset,,
11 11
locality,locality,,
inputs/UBC/Specimen/map.csv
3 3
id,dataProviderRecordID,,
4 4
collectionCode,collection,,
5 5
identificationQualifier,identificationQualifier,,
6
institutionID,UNUSED,,
6
institutionID,UNUSED#institutionID,,
7 7
taxonRank,taxonRank,,
8 8
nomenclaturalCode,nomenclaturalCode,,
9 9
verbatimElevation,verbatimElevation,,
inputs/HIBG/Specimen/map.csv
7 7
verbatimSRS,verbatimSRS,,
8 8
references,distributors,,
9 9
habitat,habitat,,
10
institutionID,UNUSED,,
10
institutionID,UNUSED#institutionID,,
11 11
decimalLongitude,decimalLongitude,,
12 12
verbatimCoordinateSystem,coordinateUnits,,
13 13
catalogNumber,accessionNumber,,
inputs/bien_web/observation/VegBIEN.csv
72 72
abund10,,** No join mapping for *abund10 ** 
73 73
abund2.5,,** No join mapping for *abund2.5 ** 
74 74
acceptance,,** No join mapping for *acceptance ** 
75
acceptance_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
75
acceptance_index,,** No non-empty join mapping for OMIT#acceptance_index ** Placeholder column created by MySQL to PostgreSQL translation
76 76
bien2_DBPlotID,,** No join mapping for *bien2_DBPlotID ** 
77
bien2_DBPlotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
77
bien2_DBPlotID_index,,** No non-empty join mapping for OMIT#bien2_DBPlotID_index ** Placeholder column created by MySQL to PostgreSQL translation
78 78
bien2_ObservationID,,** No join mapping for *bien2_ObservationID ** 
79
bien2_ObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
79
bien2_ObservationID_index,,** No non-empty join mapping for OMIT#bien2_ObservationID_index ** Placeholder column created by MySQL to PostgreSQL translation
80 80
bien2_OccurID,,** No join mapping for *bien2_OccurID ** 
81
bien2_OccurID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
81
bien2_OccurID_index,,** No non-empty join mapping for OMIT#bien2_OccurID_index ** Placeholder column created by MySQL to PostgreSQL translation
82 82
bien2_TraitObservationID,,** No join mapping for *bien2_TraitObservationID ** 
83
bien2_TraitObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
83
bien2_TraitObservationID_index,,** No non-empty join mapping for OMIT#bien2_TraitObservationID_index ** Placeholder column created by MySQL to PostgreSQL translation
84 84
bien2_taxonomyID,,** No join mapping for *bien2_taxonomyID ** 
85
bien2_taxonomyID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
86
collector_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
85
bien2_taxonomyID_index,,** No non-empty join mapping for OMIT#bien2_taxonomyID_index ** Placeholder column created by MySQL to PostgreSQL translation
86
collector_index,,** No non-empty join mapping for OMIT#collector_index ** Placeholder column created by MySQL to PostgreSQL translation
87 87
countryError,,** No join mapping for *countryError ** 
88
country_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
88
country_index,,** No non-empty join mapping for OMIT#country_index ** Placeholder column created by MySQL to PostgreSQL translation
89 89
dataSourceID,,** No join mapping for *dataSourceID ** 
90
dataSourceID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
90
dataSourceID_index,,** No non-empty join mapping for OMIT#dataSourceID_index ** Placeholder column created by MySQL to PostgreSQL translation
91 91
dataSourceNamePrimary,,** No join mapping for *dataSourceNamePrimary ** 
92
dataSourceNamePrimary_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
93
dataSourceName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
94
family_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
95
genus_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
92
dataSourceNamePrimary_index,,** No non-empty join mapping for OMIT#dataSourceNamePrimary_index ** Placeholder column created by MySQL to PostgreSQL translation
93
dataSourceName_index,,** No non-empty join mapping for OMIT#dataSourceName_index ** Placeholder column created by MySQL to PostgreSQL translation
94
family_index,,** No non-empty join mapping for OMIT#family_index ** Placeholder column created by MySQL to PostgreSQL translation
95
genus_index,,** No non-empty join mapping for OMIT#genus_index ** Placeholder column created by MySQL to PostgreSQL translation
96 96
higherPlantGroup,,** No join mapping for higherPlantGroup ** 
97
higherPlantGroup_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
98
identifiedBy_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
97
higherPlantGroup_index,,** No non-empty join mapping for OMIT#higherPlantGroup_index ** Placeholder column created by MySQL to PostgreSQL translation
98
identifiedBy_index,,** No non-empty join mapping for OMIT#identifiedBy_index ** Placeholder column created by MySQL to PostgreSQL translation
99 99
isCultivatedReason,,** No join mapping for cultivatedBasis ** 
100
isCultivatedReason_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
101
isCultivated_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
102
isGeovalid_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
100
isCultivatedReason_index,,** No non-empty join mapping for OMIT#isCultivatedReason_index ** Placeholder column created by MySQL to PostgreSQL translation
101
isCultivated_index,,** No non-empty join mapping for OMIT#isCultivated_index ** Placeholder column created by MySQL to PostgreSQL translation
102
isGeovalid_index,,** No non-empty join mapping for OMIT#isGeovalid_index ** Placeholder column created by MySQL to PostgreSQL translation
103 103
isNewWorld,,** No join mapping for isNewWorld ** 
104
isNewWorld_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
105
isValidLatLong_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
104
isNewWorld_index,,** No non-empty join mapping for OMIT#isNewWorld_index ** Placeholder column created by MySQL to PostgreSQL translation
105
isValidLatLong_index,,** No non-empty join mapping for OMIT#isValidLatLong_index ** Placeholder column created by MySQL to PostgreSQL translation
106 106
localityDescription,,** No join mapping for *localityDescription ** 
107
observationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
108
observationType_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
109
plotAreaHa_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
110
plotCode_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
111
plotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
112
plotMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
107
observationID_index,,** No non-empty join mapping for OMIT#observationID_index ** Placeholder column created by MySQL to PostgreSQL translation
108
observationType_index,,** No non-empty join mapping for OMIT#observationType_index ** Placeholder column created by MySQL to PostgreSQL translation
109
plotAreaHa_index,,** No non-empty join mapping for OMIT#plotAreaHa_index ** Placeholder column created by MySQL to PostgreSQL translation
110
plotCode_index,,** No non-empty join mapping for OMIT#plotCode_index ** Placeholder column created by MySQL to PostgreSQL translation
111
plotID_index,,** No non-empty join mapping for OMIT#plotID_index ** Placeholder column created by MySQL to PostgreSQL translation
112
plotMethod_index,,** No non-empty join mapping for OMIT#plotMethod_index ** Placeholder column created by MySQL to PostgreSQL translation
113 113
plotMinDbh,,** No join mapping for *plotMinDbh ** 
114
plotMinDbh_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
114
plotMinDbh_index,,** No non-empty join mapping for OMIT#plotMinDbh_index ** Placeholder column created by MySQL to PostgreSQL translation
115 115
rank,,** No join mapping for *rank ** 
116
rank_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
117
species_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
116
rank_index,,** No non-empty join mapping for OMIT#rank_index ** Placeholder column created by MySQL to PostgreSQL translation
117
species_index,,** No non-empty join mapping for OMIT#species_index ** Placeholder column created by MySQL to PostgreSQL translation
118 118
stateProvinceError,,** No join mapping for *stateProvinceError ** 
119
stateProvince_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
120
taxonAuthor_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
119
stateProvince_index,,** No non-empty join mapping for OMIT#stateProvince_index ** Placeholder column created by MySQL to PostgreSQL translation
120
taxonAuthor_index,,** No non-empty join mapping for OMIT#taxonAuthor_index ** Placeholder column created by MySQL to PostgreSQL translation
121 121
taxonAuthorityVerbatim,,** No join mapping for *taxonAuthorityVerbatim ** 
122
taxonAuthorityVerbatim_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
122
taxonAuthorityVerbatim_index,,** No non-empty join mapping for OMIT#taxonAuthorityVerbatim_index ** Placeholder column created by MySQL to PostgreSQL translation
123 123
taxonMorphospecies,,** No join mapping for speciesBinomialWithMorphospecies ** 
124
taxonMorphospecies_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
125
taxon_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
124
taxonMorphospecies_index,,** No non-empty join mapping for OMIT#taxonMorphospecies_index ** Placeholder column created by MySQL to PostgreSQL translation
125
taxon_index,,** No non-empty join mapping for OMIT#taxon_index ** Placeholder column created by MySQL to PostgreSQL translation
126 126
traitMethod,,** No join mapping for *traitMethod ** 
127
traitMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
128
traitName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
127
traitMethod_index,,** No non-empty join mapping for OMIT#traitMethod_index ** Placeholder column created by MySQL to PostgreSQL translation
128
traitName_index,,** No non-empty join mapping for OMIT#traitName_index ** Placeholder column created by MySQL to PostgreSQL translation
129 129
traitUnit,,** No join mapping for *traitUnit ** 
130
traitUnit_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
130
traitUnit_index,,** No non-empty join mapping for OMIT#traitUnit_index ** Placeholder column created by MySQL to PostgreSQL translation
inputs/NY/Ecatalog_all/VegBIEN.csv
79 79
StateProvince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
80 80
StateProvince,/location/locationplace/*_id/place/stateprovince,
81 81
BasisOfRecord,,** No join mapping for basisOfRecord ** 
82
CollectorNumber,,** No non-empty join mapping for UNUSED ** 
82
CollectorNumber,,** No non-empty join mapping for UNUSED#CollectorNumber ** 
83 83
DateLastModified,,** No join mapping for modified ** 
84 84
JulianDay,,** No join mapping for day ** 
85 85
PreparationType,,** No join mapping for preparations ** 
......
88 88
RelationshipType,,** No join mapping for relationshipOfResource ** 
89 89
TimeOfDay,,** No join mapping for eventTime ** 
90 90
TypeStatus,,** No join mapping for typeStatus ** 
91
UniqueNYInternalRecordNumber,,** No non-empty join mapping for OMIT ** Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID.
92
key,,"** No non-empty join mapping for OMIT ** CatalogNumber, etc. is a better pkey"
93
pkey,,"** No non-empty join mapping for OMIT ** CatalogNumber, etc. is a better pkey"
91
UniqueNYInternalRecordNumber,,** No non-empty join mapping for OMIT#UniqueNYInternalRecordNumber ** Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID.
92
key,,"** No non-empty join mapping for OMIT#key ** CatalogNumber, etc. is a better pkey"
93
pkey,,"** No non-empty join mapping for OMIT#pkey ** CatalogNumber, etc. is a better pkey"
inputs/Madidi/IndividualObservation/VegBIEN.csv
72 72
Sequence,"/location/sourceaccessioncode/_first/2/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/then/_join/2",
73 73
SubplotX,/location/sublocationxposition_m,
74 74
SubplotY,/location/sublocationyposition_m,
75
AreaRachilla1,,** No non-empty join mapping for UNUSED ** 
76
AreaRachilla2,,** No non-empty join mapping for UNUSED ** 
77
AreaRachilla3,,** No non-empty join mapping for UNUSED ** 
78
AreaRachilla4,,** No non-empty join mapping for UNUSED ** 
79
AreaRachilla5,,** No non-empty join mapping for UNUSED ** 
80
AreaRachis1,,** No non-empty join mapping for UNUSED ** 
81
AreaRachis2,,** No non-empty join mapping for UNUSED ** 
82
AreaRachis3,,** No non-empty join mapping for UNUSED ** 
83
AreaRachis4,,** No non-empty join mapping for UNUSED ** 
84
AreaRachis5,,** No non-empty join mapping for UNUSED ** 
75
AreaRachilla1,,** No non-empty join mapping for UNUSED#AreaRachilla1 ** 
76
AreaRachilla2,,** No non-empty join mapping for UNUSED#AreaRachilla2 ** 
77
AreaRachilla3,,** No non-empty join mapping for UNUSED#AreaRachilla3 ** 
78
AreaRachilla4,,** No non-empty join mapping for UNUSED#AreaRachilla4 ** 
79
AreaRachilla5,,** No non-empty join mapping for UNUSED#AreaRachilla5 ** 
80
AreaRachis1,,** No non-empty join mapping for UNUSED#AreaRachis1 ** 
81
AreaRachis2,,** No non-empty join mapping for UNUSED#AreaRachis2 ** 
82
AreaRachis3,,** No non-empty join mapping for UNUSED#AreaRachis3 ** 
83
AreaRachis4,,** No non-empty join mapping for UNUSED#AreaRachis4 ** 
84
AreaRachis5,,** No non-empty join mapping for UNUSED#AreaRachis5 ** 
85 85
BoleHeight,,** No join mapping for *BoleHeight ** 
86
CauseOfDeath1,,** No non-empty join mapping for UNUSED ** 
87
CauseOfDeath2,,** No non-empty join mapping for UNUSED ** 
88
CauseOfDeath3,,** No non-empty join mapping for UNUSED ** 
89
CauseOfDeath4,,** No non-empty join mapping for UNUSED ** 
90
CauseOfDeath5,,** No non-empty join mapping for UNUSED ** 
86
CauseOfDeath1,,** No non-empty join mapping for UNUSED#CauseOfDeath1 ** 
87
CauseOfDeath2,,** No non-empty join mapping for UNUSED#CauseOfDeath2 ** 
88
CauseOfDeath3,,** No non-empty join mapping for UNUSED#CauseOfDeath3 ** 
89
CauseOfDeath4,,** No non-empty join mapping for UNUSED#CauseOfDeath4 ** 
90
CauseOfDeath5,,** No non-empty join mapping for UNUSED#CauseOfDeath5 ** 
91 91
Circumference,,** No join mapping for *Circumference ** 
92 92
CommonName,,** No join mapping for vernacularName ** 
93
CompoundLeaf,,** No non-empty join mapping for UNUSED ** 
94
CompoundLeafID,,** No non-empty join mapping for UNUSED ** 
93
CompoundLeaf,,** No non-empty join mapping for UNUSED#CompoundLeaf ** 
94
CompoundLeafID,,** No non-empty join mapping for UNUSED#CompoundLeafID ** 
95 95
CrownPositionName,,** No join mapping for *CrownPositionName ** 
96 96
CrownShapeName,,** No join mapping for *CrownShapeName ** 
97
CurrentDetFamily,,"** No non-empty join mapping for OMIT ** Omitted because includes *family* author, which TNRS can’t handle"
97
CurrentDetFamily,,"** No non-empty join mapping for OMIT#CurrentDetFamily ** Omitted because includes *family* author, which TNRS can’t handle"
98 98
DNASample,,** No join mapping for *DNASample ** 
99
Decomposition,,** No non-empty join mapping for UNUSED ** 
100
DiameterWithBark,,** No non-empty join mapping for UNUSED ** 
101
DiameterWithoutBark,,** No non-empty join mapping for UNUSED ** 
102
DirectionOfFall,,** No non-empty join mapping for UNUSED ** 
103
DryWeight,,** No non-empty join mapping for UNUSED ** 
104
FieldFamilyHTML,,"** No non-empty join mapping for OMIT ** Omitted because includes *family* author, which TNRS can’t handle"
105
FieldNameHTML,,** No non-empty join mapping for OMIT ** Adds HTML formatting to FieldNameFullName+FieldNameAuthors
106
HeightButtresses,,** No non-empty join mapping for UNUSED ** 
99
Decomposition,,** No non-empty join mapping for UNUSED#Decomposition ** 
100
DiameterWithBark,,** No non-empty join mapping for UNUSED#DiameterWithBark ** 
101
DiameterWithoutBark,,** No non-empty join mapping for UNUSED#DiameterWithoutBark ** 
102
DirectionOfFall,,** No non-empty join mapping for UNUSED#DirectionOfFall ** 
103
DryWeight,,** No non-empty join mapping for UNUSED#DryWeight ** 
104
FieldFamilyHTML,,"** No non-empty join mapping for OMIT#FieldFamilyHTML ** Omitted because includes *family* author, which TNRS can’t handle"
105
FieldNameHTML,,** No non-empty join mapping for OMIT#FieldNameHTML ** Adds HTML formatting to FieldNameFullName+FieldNameAuthors
106
HeightButtresses,,** No non-empty join mapping for UNUSED#HeightButtresses ** 
107 107
InstitutionString,,** No join mapping for *InstitutionString ** 
108 108
IsAlive,,** No join mapping for *IsAlive ** 
109
LeafPhoto1,,** No non-empty join mapping for UNUSED ** 
110
LeafPhoto2,,** No non-empty join mapping for UNUSED ** 
111
LeafPhoto3,,** No non-empty join mapping for UNUSED ** 
112
LeafPhoto4,,** No non-empty join mapping for UNUSED ** 
113
LeafPhoto5,,** No non-empty join mapping for UNUSED ** 
109
LeafPhoto1,,** No non-empty join mapping for UNUSED#LeafPhoto1 ** 
110
LeafPhoto2,,** No non-empty join mapping for UNUSED#LeafPhoto2 ** 
111
LeafPhoto3,,** No non-empty join mapping for UNUSED#LeafPhoto3 ** 
112
LeafPhoto4,,** No non-empty join mapping for UNUSED#LeafPhoto4 ** 
113
LeafPhoto5,,** No non-empty join mapping for UNUSED#LeafPhoto5 ** 
114 114
LianaPresenceName,,** No join mapping for *LianaPresenceName ** 
115
MortalityType,,** No non-empty join mapping for UNUSED ** 
116
MultipleFalls,,** No non-empty join mapping for UNUSED ** 
117
NitrogenContent,,** No non-empty join mapping for UNUSED ** 
118
NumberFolioles1,,** No non-empty join mapping for UNUSED ** 
119
NumberFolioles2,,** No non-empty join mapping for UNUSED ** 
120
NumberFolioles3,,** No non-empty join mapping for UNUSED ** 
121
NumberFolioles4,,** No non-empty join mapping for UNUSED ** 
122
NumberFolioles5,,** No non-empty join mapping for UNUSED ** 
123
NumberFoliolules1,,** No non-empty join mapping for UNUSED ** 
124
NumberFoliolules2,,** No non-empty join mapping for UNUSED ** 
125
NumberFoliolules3,,** No non-empty join mapping for UNUSED ** 
126
NumberFoliolules4,,** No non-empty join mapping for UNUSED ** 
127
NumberFoliolules5,,** No non-empty join mapping for UNUSED ** 
128
NumberOfLeaves,,** No non-empty join mapping for UNUSED ** 
115
MortalityType,,** No non-empty join mapping for UNUSED#MortalityType ** 
116
MultipleFalls,,** No non-empty join mapping for UNUSED#MultipleFalls ** 
117
NitrogenContent,,** No non-empty join mapping for UNUSED#NitrogenContent ** 
118
NumberFolioles1,,** No non-empty join mapping for UNUSED#NumberFolioles1 ** 
119
NumberFolioles2,,** No non-empty join mapping for UNUSED#NumberFolioles2 ** 
120
NumberFolioles3,,** No non-empty join mapping for UNUSED#NumberFolioles3 ** 
121
NumberFolioles4,,** No non-empty join mapping for UNUSED#NumberFolioles4 ** 
122
NumberFolioles5,,** No non-empty join mapping for UNUSED#NumberFolioles5 ** 
123
NumberFoliolules1,,** No non-empty join mapping for UNUSED#NumberFoliolules1 ** 
124
NumberFoliolules2,,** No non-empty join mapping for UNUSED#NumberFoliolules2 ** 
125
NumberFoliolules3,,** No non-empty join mapping for UNUSED#NumberFoliolules3 ** 
126
NumberFoliolules4,,** No non-empty join mapping for UNUSED#NumberFoliolules4 ** 
127
NumberFoliolules5,,** No non-empty join mapping for UNUSED#NumberFoliolules5 ** 
128
NumberOfLeaves,,** No non-empty join mapping for UNUSED#NumberOfLeaves ** 
129 129
OrientationXDegrees,,** No join mapping for *OrientationXDegrees ** 
130 130
OrientationYDegrees,,** No join mapping for *OrientationYDegrees ** 
131 131
Phenology1,,** No join mapping for *Phenology1 ** 
132 132
Phenology2,,** No join mapping for *Phenology2 ** 
133 133
Phenology3,,** No join mapping for *Phenology3 ** 
134 134
Phenology4,,** No join mapping for *Phenology4 ** 
135
RachisPhoto1,,** No non-empty join mapping for UNUSED ** 
136
RachisPhoto2,,** No non-empty join mapping for UNUSED ** 
137
RachisPhoto3,,** No non-empty join mapping for UNUSED ** 
138
RachisPhoto4,,** No non-empty join mapping for UNUSED ** 
139
RachisPhoto5,,** No non-empty join mapping for UNUSED ** 
140
RemainingTrunkHeight,,** No non-empty join mapping for UNUSED ** 
135
RachisPhoto1,,** No non-empty join mapping for UNUSED#RachisPhoto1 ** 
136
RachisPhoto2,,** No non-empty join mapping for UNUSED#RachisPhoto2 ** 
137
RachisPhoto3,,** No non-empty join mapping for UNUSED#RachisPhoto3 ** 
138
RachisPhoto4,,** No non-empty join mapping for UNUSED#RachisPhoto4 ** 
139
RachisPhoto5,,** No non-empty join mapping for UNUSED#RachisPhoto5 ** 
140
RemainingTrunkHeight,,** No non-empty join mapping for UNUSED#RemainingTrunkHeight ** 
141 141
RepresentativeCollectionNumber,,** No join mapping for *RepresentativeCollectionNumber ** 
142 142
RepresentativeSpecimenCollectorAbbreviation,,** No join mapping for *RepresentativeSpecimenCollectorAbbreviation ** 
143 143
RepresentativeSpecimenID,,** No join mapping for *RepresentativeSpecimenID ** 
144 144
RepresentativeSpecimenSeniorCollector,,** No join mapping for *RepresentativeSpecimenSeniorCollector ** 
145
SLAArea1,,** No non-empty join mapping for UNUSED ** 
146
SLAArea10,,** No non-empty join mapping for UNUSED ** 
147
SLAArea11,,** No non-empty join mapping for UNUSED ** 
148
SLAArea12,,** No non-empty join mapping for UNUSED ** 
149
SLAArea13,,** No non-empty join mapping for UNUSED ** 
150
SLAArea14,,** No non-empty join mapping for UNUSED ** 
151
SLAArea15,,** No non-empty join mapping for UNUSED ** 
152
SLAArea2,,** No non-empty join mapping for UNUSED ** 
153
SLAArea3,,** No non-empty join mapping for UNUSED ** 
154
SLAArea4,,** No non-empty join mapping for UNUSED ** 
155
SLAArea5,,** No non-empty join mapping for UNUSED ** 
156
SLAArea6,,** No non-empty join mapping for UNUSED ** 
157
SLAArea7,,** No non-empty join mapping for UNUSED ** 
158
SLAArea8,,** No non-empty join mapping for UNUSED ** 
159
SLAArea9,,** No non-empty join mapping for UNUSED ** 
145
SLAArea1,,** No non-empty join mapping for UNUSED#SLAArea1 ** 
146
SLAArea10,,** No non-empty join mapping for UNUSED#SLAArea10 ** 
147
SLAArea11,,** No non-empty join mapping for UNUSED#SLAArea11 ** 
148
SLAArea12,,** No non-empty join mapping for UNUSED#SLAArea12 ** 
149
SLAArea13,,** No non-empty join mapping for UNUSED#SLAArea13 ** 
150
SLAArea14,,** No non-empty join mapping for UNUSED#SLAArea14 ** 
151
SLAArea15,,** No non-empty join mapping for UNUSED#SLAArea15 ** 
152
SLAArea2,,** No non-empty join mapping for UNUSED#SLAArea2 ** 
153
SLAArea3,,** No non-empty join mapping for UNUSED#SLAArea3 ** 
154
SLAArea4,,** No non-empty join mapping for UNUSED#SLAArea4 ** 
155
SLAArea5,,** No non-empty join mapping for UNUSED#SLAArea5 ** 
156
SLAArea6,,** No non-empty join mapping for UNUSED#SLAArea6 ** 
157
SLAArea7,,** No non-empty join mapping for UNUSED#SLAArea7 ** 
158
SLAArea8,,** No non-empty join mapping for UNUSED#SLAArea8 ** 
159
SLAArea9,,** No non-empty join mapping for UNUSED#SLAArea9 ** 
160 160
SubplotX2,,** No join mapping for *SubplotX2 ** 
161 161
SubplotY2,,** No join mapping for *SubplotY2 ** 
162
Thickness1,,** No non-empty join mapping for UNUSED ** 
163
Thickness10,,** No non-empty join mapping for UNUSED ** 
164
Thickness11,,** No non-empty join mapping for UNUSED ** 
165
Thickness12,,** No non-empty join mapping for UNUSED ** 
166
Thickness13,,** No non-empty join mapping for UNUSED ** 
167
Thickness14,,** No non-empty join mapping for UNUSED ** 
168
Thickness15,,** No non-empty join mapping for UNUSED ** 
169
Thickness2,,** No non-empty join mapping for UNUSED ** 
170
Thickness3,,** No non-empty join mapping for UNUSED ** 
171
Thickness4,,** No non-empty join mapping for UNUSED ** 
172
Thickness5,,** No non-empty join mapping for UNUSED ** 
173
Thickness6,,** No non-empty join mapping for UNUSED ** 
174
Thickness7,,** No non-empty join mapping for UNUSED ** 
175
Thickness8,,** No non-empty join mapping for UNUSED ** 
176
Thickness9,,** No non-empty join mapping for UNUSED ** 
177
TotArea1,,** No non-empty join mapping for UNUSED ** 
178
TotArea10,,** No non-empty join mapping for UNUSED ** 
179
TotArea11,,** No non-empty join mapping for UNUSED ** 
180
TotArea12,,** No non-empty join mapping for UNUSED ** 
181
TotArea13,,** No non-empty join mapping for UNUSED ** 
182
TotArea14,,** No non-empty join mapping for UNUSED ** 
183
TotArea15,,** No non-empty join mapping for UNUSED ** 
184
TotArea2,,** No non-empty join mapping for UNUSED ** 
185
TotArea3,,** No non-empty join mapping for UNUSED ** 
186
TotArea4,,** No non-empty join mapping for UNUSED ** 
187
TotArea5,,** No non-empty join mapping for UNUSED ** 
188
TotArea6,,** No non-empty join mapping for UNUSED ** 
189
TotArea7,,** No non-empty join mapping for UNUSED ** 
190
TotArea8,,** No non-empty join mapping for UNUSED ** 
191
TotArea9,,** No non-empty join mapping for UNUSED ** 
192
TreeLeaf3Notes,,** No non-empty join mapping for UNUSED ** 
193
TreeMortalityNotes,,** No non-empty join mapping for UNUSED ** 
194
TreeTrunkNotes,,** No non-empty join mapping for UNUSED ** 
195
VesselArea,,** No non-empty join mapping for UNUSED ** 
196
VesselNumber,,** No non-empty join mapping for UNUSED ** 
197
Volume1,,** No non-empty join mapping for UNUSED ** 
198
Volume2,,** No non-empty join mapping for UNUSED ** 
162
Thickness1,,** No non-empty join mapping for UNUSED#Thickness1 ** 
163
Thickness10,,** No non-empty join mapping for UNUSED#Thickness10 ** 
164
Thickness11,,** No non-empty join mapping for UNUSED#Thickness11 ** 
165
Thickness12,,** No non-empty join mapping for UNUSED#Thickness12 ** 
166
Thickness13,,** No non-empty join mapping for UNUSED#Thickness13 ** 
167
Thickness14,,** No non-empty join mapping for UNUSED#Thickness14 ** 
168
Thickness15,,** No non-empty join mapping for UNUSED#Thickness15 ** 
169
Thickness2,,** No non-empty join mapping for UNUSED#Thickness2 ** 
170
Thickness3,,** No non-empty join mapping for UNUSED#Thickness3 ** 
171
Thickness4,,** No non-empty join mapping for UNUSED#Thickness4 ** 
172
Thickness5,,** No non-empty join mapping for UNUSED#Thickness5 ** 
173
Thickness6,,** No non-empty join mapping for UNUSED#Thickness6 ** 
174
Thickness7,,** No non-empty join mapping for UNUSED#Thickness7 ** 
175
Thickness8,,** No non-empty join mapping for UNUSED#Thickness8 ** 
176
Thickness9,,** No non-empty join mapping for UNUSED#Thickness9 ** 
177
TotArea1,,** No non-empty join mapping for UNUSED#TotArea1 ** 
178
TotArea10,,** No non-empty join mapping for UNUSED#TotArea10 ** 
179
TotArea11,,** No non-empty join mapping for UNUSED#TotArea11 ** 
180
TotArea12,,** No non-empty join mapping for UNUSED#TotArea12 ** 
181
TotArea13,,** No non-empty join mapping for UNUSED#TotArea13 ** 
182
TotArea14,,** No non-empty join mapping for UNUSED#TotArea14 ** 
183
TotArea15,,** No non-empty join mapping for UNUSED#TotArea15 ** 
184
TotArea2,,** No non-empty join mapping for UNUSED#TotArea2 ** 
185
TotArea3,,** No non-empty join mapping for UNUSED#TotArea3 ** 
186
TotArea4,,** No non-empty join mapping for UNUSED#TotArea4 ** 
187
TotArea5,,** No non-empty join mapping for UNUSED#TotArea5 ** 
188
TotArea6,,** No non-empty join mapping for UNUSED#TotArea6 ** 
189
TotArea7,,** No non-empty join mapping for UNUSED#TotArea7 ** 
190
TotArea8,,** No non-empty join mapping for UNUSED#TotArea8 ** 
191
TotArea9,,** No non-empty join mapping for UNUSED#TotArea9 ** 
192
TreeLeaf3Notes,,** No non-empty join mapping for UNUSED#TreeLeaf3Notes ** 
193
TreeMortalityNotes,,** No non-empty join mapping for UNUSED#TreeMortalityNotes ** 
194
TreeTrunkNotes,,** No non-empty join mapping for UNUSED#TreeTrunkNotes ** 
195
VesselArea,,** No non-empty join mapping for UNUSED#VesselArea ** 
196
VesselNumber,,** No non-empty join mapping for UNUSED#VesselNumber ** 
197
Volume1,,** No non-empty join mapping for UNUSED#Volume1 ** 
198
Volume2,,** No non-empty join mapping for UNUSED#Volume2 ** 
199 199
WasCollected,,** No join mapping for *WasCollected ** 
200
Weight1,,** No non-empty join mapping for UNUSED ** 
201
Weight10,,** No non-empty join mapping for UNUSED ** 
202
Weight11,,** No non-empty join mapping for UNUSED ** 
203
Weight12,,** No non-empty join mapping for UNUSED ** 
204
Weight13,,** No non-empty join mapping for UNUSED ** 
205
Weight14,,** No non-empty join mapping for UNUSED ** 
206
Weight15,,** No non-empty join mapping for UNUSED ** 
207
Weight2,,** No non-empty join mapping for UNUSED ** 
208
Weight3,,** No non-empty join mapping for UNUSED ** 
209
Weight4,,** No non-empty join mapping for UNUSED ** 
210
Weight5,,** No non-empty join mapping for UNUSED ** 
211
Weight6,,** No non-empty join mapping for UNUSED ** 
212
Weight7,,** No non-empty join mapping for UNUSED ** 
213
Weight8,,** No non-empty join mapping for UNUSED ** 
214
Weight9,,** No non-empty join mapping for UNUSED ** 
215
WeightOfBranch,,** No non-empty join mapping for UNUSED ** 
216
WeightRachilla1,,** No non-empty join mapping for UNUSED ** 
217
WeightRachilla2,,** No non-empty join mapping for UNUSED ** 
218
WeightRachilla3,,** No non-empty join mapping for UNUSED ** 
219
WeightRachilla4,,** No non-empty join mapping for UNUSED ** 
220
WeightRachilla5,,** No non-empty join mapping for UNUSED ** 
221
WeightRachis1,,** No non-empty join mapping for UNUSED ** 
222
WeightRachis2,,** No non-empty join mapping for UNUSED ** 
223
WeightRachis3,,** No non-empty join mapping for UNUSED ** 
224
WeightRachis4,,** No non-empty join mapping for UNUSED ** 
225
WeightRachis5,,** No non-empty join mapping for UNUSED ** 
226
WidthButtresses,,** No non-empty join mapping for UNUSED ** 
200
Weight1,,** No non-empty join mapping for UNUSED#Weight1 ** 
201
Weight10,,** No non-empty join mapping for UNUSED#Weight10 ** 
202
Weight11,,** No non-empty join mapping for UNUSED#Weight11 ** 
203
Weight12,,** No non-empty join mapping for UNUSED#Weight12 ** 
204
Weight13,,** No non-empty join mapping for UNUSED#Weight13 ** 
205
Weight14,,** No non-empty join mapping for UNUSED#Weight14 ** 
206
Weight15,,** No non-empty join mapping for UNUSED#Weight15 ** 
207
Weight2,,** No non-empty join mapping for UNUSED#Weight2 ** 
208
Weight3,,** No non-empty join mapping for UNUSED#Weight3 ** 
209
Weight4,,** No non-empty join mapping for UNUSED#Weight4 ** 
210
Weight5,,** No non-empty join mapping for UNUSED#Weight5 ** 
211
Weight6,,** No non-empty join mapping for UNUSED#Weight6 ** 
212
Weight7,,** No non-empty join mapping for UNUSED#Weight7 ** 
213
Weight8,,** No non-empty join mapping for UNUSED#Weight8 ** 
214
Weight9,,** No non-empty join mapping for UNUSED#Weight9 ** 
215
WeightOfBranch,,** No non-empty join mapping for UNUSED#WeightOfBranch ** 
216
WeightRachilla1,,** No non-empty join mapping for UNUSED#WeightRachilla1 ** 
217
WeightRachilla2,,** No non-empty join mapping for UNUSED#WeightRachilla2 ** 
218
WeightRachilla3,,** No non-empty join mapping for UNUSED#WeightRachilla3 ** 
219
WeightRachilla4,,** No non-empty join mapping for UNUSED#WeightRachilla4 ** 
220
WeightRachilla5,,** No non-empty join mapping for UNUSED#WeightRachilla5 ** 
221
WeightRachis1,,** No non-empty join mapping for UNUSED#WeightRachis1 ** 
222
WeightRachis2,,** No non-empty join mapping for UNUSED#WeightRachis2 ** 
223
WeightRachis3,,** No non-empty join mapping for UNUSED#WeightRachis3 ** 
224
WeightRachis4,,** No non-empty join mapping for UNUSED#WeightRachis4 ** 
225
WeightRachis5,,** No non-empty join mapping for UNUSED#WeightRachis5 ** 
226
WidthButtresses,,** No non-empty join mapping for UNUSED#WidthButtresses ** 
227 227
row_num,,** No join mapping for *row_num ** 
inputs/TEAM/VT/new_terms.csv
1 1
Observation Date,eventDate,,
2 2
Names of Collectors,recordedBy,,
3 3
Diameter,diameterBreastHeight_cm,,"""Tree diameter measurement. {cm}"" (Diameter definition on p. 7 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
4
Spatial Method,OMIT,,"Just contains ""Derived"", for 14927 rows"
4
Spatial Method,OMIT#Spatial Method,,"Just contains ""Derived"", for 14927 rows"
5 5
Subplot Number,subplot,,
6 6
1ha Plot X Coordinate,organismX_m,,"""Point of intersection {in the X axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot X Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
7 7
1ha Plot Y Coordinate,organismY_m,,"""Point of intersection {in the Y axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot Y Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
inputs/CTFS/TaxonOccurrence/map.csv
13 13
SubSpeciesName,subspecies,,
14 14
SubSpeciesMnemonic,*SubSpeciesMnemonic,,
15 15
SubSpeciesAuthority,*SubSpeciesAuthority,,
16
InfraSpecificLevel,UNUSED,,
16
InfraSpecificLevel,UNUSED#InfraSpecificLevel,,
17 17
SpecificEpithet.src.row_num,*SpecificEpithet.src.row_num,,
18 18
SpeciesCurrentTaxonFlag,*SpeciesCurrentTaxonFlag,,
19 19
SpeciesObsoleteTaxonFlag,*SpeciesObsoleteTaxonFlag,,
inputs/CTFS/TaxonOccurrence/VegBIEN.csv
36 36
GenusID,,** No join mapping for *GenusID ** 
37 37
GenusReferenceID,,** No join mapping for *GenusReferenceID ** 
38 38
IDLevel,,** No join mapping for *IDLevel ** 
39
InfraSpecificLevel,,** No non-empty join mapping for UNUSED ** 
39
InfraSpecificLevel,,** No non-empty join mapping for UNUSED#InfraSpecificLevel ** 
40 40
InfraspecificEpithet.src.row_num,,** No join mapping for *InfraspecificEpithet.src.row_num ** 
41 41
ReferenceID,,** No join mapping for *ReferenceID ** 
42 42
SpeciesCurrentTaxonFlag,,** No join mapping for *SpeciesCurrentTaxonFlag ** 
inputs/CTFS/Subplot/map.csv
2 2
row_num,*row_num,,
3 3
QuadratID,subplot,,Not globally unique; unique only within Site
4 4
PlotID,locationID,,
5
QuadratName,OMIT,,QuadratID is used for the same purpose
5
QuadratName,OMIT#QuadratName,,QuadratID is used for the same purpose
6 6
StartX,subplotX,,
7 7
StartY,subplotY,,
8 8
DimX,*DimX,,
inputs/CTFS/Subplot/VegBIEN.csv
17 17
StartY,/location/sublocationyposition_m,
18 18
DimX,,** No join mapping for *DimX ** 
19 19
DimY,,** No join mapping for *DimY ** 
20
QuadratName,,** No non-empty join mapping for OMIT ** QuadratID is used for the same purpose
20
QuadratName,,** No non-empty join mapping for OMIT#QuadratName ** QuadratID is used for the same purpose
21 21
row_num,,** No join mapping for *row_num ** 
inputs/TEX/Specimen2/map.csv
19 19
LATITUDE,latitude_DMS,,
20 20
LONGITUDE,longitude_DMS,,
21 21
EXACT DATE,dateCollected,/_alt/1,
22
END DATE,UNUSED,,
22
END DATE,UNUSED#END DATE,,
23 23
GENERAL DATE,dateCollected,/_alt/2,
24 24
COLLECTOR 1 FIRST NAME,recordedBy,/_join/1/_join_words/1,
25 25
COLLECTOR 1 LAST NAME,recordedBy,/_join/1/_join_words/2,
inputs/TEX/Specimen2/VegBIEN.csv
63 63
DATABASED BY,,** No join mapping for *DATABASED BY ** 
64 64
DET NOTES,,** No join mapping for identificationRemarks ** 
65 65
DETERMINER INSTITUTION,,** No join mapping for *DETERMINER INSTITUTION ** 
66
END DATE,,** No non-empty join mapping for UNUSED ** 
66
END DATE,,** No non-empty join mapping for UNUSED#END DATE ** 
67 67
LATLONG DATUM,,** No join mapping for *LATLONG DATUM ** 
68 68
LATLONG SOURCE,,** No join mapping for *LATLONG SOURCE ** 
69 69
SUBSPECIES AUTHOR,,** No join mapping for *SUBSPECIES AUTHOR ** 
inputs/BRIT/specimen_flat/map.csv
1 1
BRIT,VegCore,Filter,Comments
2 2
specimen_id,dataProviderRecordID,,
3 3
Institution_Code,specimenHolderInstitutions,,
4
Global_Unique_Identifier,UNUSED,,
4
Global_Unique_Identifier,UNUSED#Global_Unique_Identifier,,
5 5
Collector_Abbrev_Name,recordedBy,/_join/1,
6 6
Collection_Team,recordedBy,/_join/2,
7 7
Collection_Number,collectorNumber,,
......
27 27
Country_Name,country,,
28 28
Region_Name,stateProvince,,
29 29
Subregion_Name,county,,
30
Closest_Town,UNUSED,,
30
Closest_Town,UNUSED#Closest_Town,,
31 31
Research_Site_Name,*Research_Site_Name,,
32 32
Project_Name,projectName,,
33 33
Locality_Summary,locality,/_join/1,
......
49 49
Elevation_Min,minimumElevationInMeters,,Assuming units based on the range and precision of values
50 50
Elevation_Max,maximumElevationInMeters,,Assuming units based on the range and precision of values
51 51
Basis_Of_Specimen,basisOfRecord,,
52
Auxilirary_Collections,UNUSED,,
52
Auxilirary_Collections,UNUSED#Auxilirary_Collections,,
53 53
Collection_Method,samplingProtocol,,
54
Dubpliate_Herbarium,UNUSED,,
54
Dubpliate_Herbarium,UNUSED#Dubpliate_Herbarium,,
55 55
Duplicates,*Duplicates,,# of duplicates
56
Type_Specimen,UNUSED,,
56
Type_Specimen,UNUSED#Type_Specimen,,
57 57
Updated_date,modified,,
58 58
Determined_By_Name,identifiedBy,,
59 59
Determined_By_Date,dateIdentified,,
inputs/BRIT/specimen_flat/VegBIEN.csv
92 92
Subregion_Name,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,
93 93
Region_Name,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
94 94
Region_Name,/location/locationplace/*_id/place/stateprovince,
95
Auxilirary_Collections,,** No non-empty join mapping for UNUSED ** 
95
Auxilirary_Collections,,** No non-empty join mapping for UNUSED#Auxilirary_Collections ** 
96 96
Basis_Of_Specimen,,** No join mapping for basisOfRecord ** 
97
Closest_Town,,** No non-empty join mapping for UNUSED ** 
98
Dubpliate_Herbarium,,** No non-empty join mapping for UNUSED ** 
97
Closest_Town,,** No non-empty join mapping for UNUSED#Closest_Town ** 
98
Dubpliate_Herbarium,,** No non-empty join mapping for UNUSED#Dubpliate_Herbarium ** 
99 99
Duplicates,,** No join mapping for *Duplicates ** # of duplicates
100
Global_Unique_Identifier,,** No non-empty join mapping for UNUSED ** 
100
Global_Unique_Identifier,,** No non-empty join mapping for UNUSED#Global_Unique_Identifier ** 
101 101
Infra_Rank,,** No join mapping for infraspecificRank ** 
102 102
Local_Name,,** No join mapping for vernacularName ** 
103 103
Research_Site_Name,,** No join mapping for *Research_Site_Name ** 
104 104
Soil_Description,,** No join mapping for *Soil_Description ** 
105 105
Subclass_Name,,** No join mapping for *subclass ** 
106
Type_Specimen,,** No non-empty join mapping for UNUSED ** 
106
Type_Specimen,,** No non-empty join mapping for UNUSED#Type_Specimen ** 
107 107
Updated_date,,** No join mapping for modified ** 
inputs/SALVIAS/plotObservations/map.csv
29 29
coll_firstname,recordedBy_givenName,,Brad: See comment above
30 30
DetType,voucherType,,"Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."
31 31
det_by,identifiedBy,,
32
fam_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS.
33
gen_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS.
34
name_status,OMIT,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
32
fam_status,OMIT#fam_status,,Brad: OMIT. This will be determined later by using TNRS.
33
gen_status,OMIT#gen_status,,Brad: OMIT. This will be determined later by using TNRS.
34
name_status,OMIT#name_status,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
35 35
SpAuthStatus,*SpAuthStatus,,
36 36
Family,family,,
37 37
Genus,genus,,
inputs/SALVIAS/plotObservations/VegBIEN.csv
137 137
collector_code,,** No join mapping for *collector_code ** Brad: OMIT
138 138
common_name,,** No join mapping for vernacularName ** 
139 139
dist,,** No join mapping for *dist ** 
140
fam_status,,** No non-empty join mapping for OMIT ** Brad: OMIT. This will be determined later by using TNRS.
141
gen_status,,** No non-empty join mapping for OMIT ** Brad: OMIT. This will be determined later by using TNRS.
140
fam_status,,** No non-empty join mapping for OMIT#fam_status ** Brad: OMIT. This will be determined later by using TNRS.
141
gen_status,,** No non-empty join mapping for OMIT#gen_status ** Brad: OMIT. This will be determined later by using TNRS.
142 142
height_class,,** No join mapping for *height_class ** 
143 143
height_m_commercial,,** No join mapping for *height_m_commercial ** 
144 144
ind_id,,** No join mapping for *ind_id ** Brad: OMIT
145 145
infra_auth_1,,** No join mapping for *infra_auth_1 ** 
146 146
morphocf,,** No join mapping for *morphocf ** 
147
name_status,,"** No non-empty join mapping for OMIT ** Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
147
name_status,,"** No non-empty join mapping for OMIT#name_status ** Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
148 148
other_annotations,,** No join mapping for *other_annotations ** 
149 149
perp_dist,,** No join mapping for *perp_dist ** 
150 150
species_code,,** No join mapping for *species_code ** 
inputs/SALVIAS/plotObservations/new_terms.csv
18 18
coll_lastname,recordedBy_surName,,"Brad: This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
19 19
coll_firstname,recordedBy_givenName,,Brad: See comment above
20 20
det_by,identifiedBy,,
21
fam_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS.
22
gen_status,OMIT,,Brad: OMIT. This will be determined later by using TNRS.
23
name_status,OMIT,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
21
fam_status,OMIT#fam_status,,Brad: OMIT. This will be determined later by using TNRS.
22
gen_status,OMIT#gen_status,,Brad: OMIT. This will be determined later by using TNRS.
23
name_status,OMIT#name_status,,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."
24 24
auth,scientificNameAuthorship,,Brad: This is the author of the scientificName.
25 25
infra_rank_1,taxonRank,,
26 26
infra_ep_1,infraspecificEpithet,,
inputs/SALVIAS/plotMetadata_/map.csv
1 1
SALVIAS,VegCore,Filter,Comments
2
MethodCode,OMIT,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
2
MethodCode,OMIT#MethodCode,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
3 3
PlotID,locationID,,"Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata."
4 4
orig_filename,*orig_filename,,
5 5
AccessCode,accessRights,"/_map:[1=private,2=""metadata only"",3=public]/value","3 plots contain 3 in this field and ""del"" in tmp_del"
inputs/SALVIAS/plotMetadata_/new_terms.csv
1
MethodCode,OMIT,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
1
MethodCode,OMIT#MethodCode,,Not globally unique after lookup_MethodCode_Description is combined with PlotMethod
2 2
AccessCode,accessRights,"/_map:[1=private,2=""metadata only"",3=public]/value","3 plots contain 3 in this field and ""del"" in tmp_del"
3 3
SiteCode,locationName,,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)
4 4
MajorGeo,continent,,
inputs/U/Specimen/VegBIEN.csv
58 58
Alt,,** No join mapping for *Alt ** What is this?
59 59
Alt2,,** No join mapping for *Alt2 ** What is this?
60 60
Coorsyst,,** No join mapping for *Coorsyst ** 
61
DateInfo,,** No non-empty join mapping for UNUSED ** 
61
DateInfo,,** No non-empty join mapping for UNUSED#DateInfo ** 
62 62
EW,,** No join mapping for *EW ** 
63 63
Majorarea,,** No join mapping for *Majorarea ** 
64 64
NS,,** No join mapping for *NS ** 
65
Prefix,,** No non-empty join mapping for UNUSED ** 
66
Suffix,,** No non-empty join mapping for UNUSED ** 
65
Prefix,,** No non-empty join mapping for UNUSED#Prefix ** 
66
Suffix,,** No non-empty join mapping for UNUSED#Suffix ** 
67 67
row_num,,** No join mapping for *row_num ** 
inputs/QFA/Specimen/VegBIEN.csv
90 90
datasetID,,** No join mapping for datasetURL ** 
91 91
datasetName,,** No join mapping for dataset ** 
92 92
geodeticDatum,,** No join mapping for geodeticDatum ** 
93
institutionID,,** No non-empty join mapping for UNUSED ** 
93
institutionID,,** No non-empty join mapping for UNUSED#institutionID ** 
94 94
language,,** No join mapping for language ** 
95 95
nomenclaturalCode,,** No join mapping for nomenclaturalCode ** 
96 96
ownerInstitutionCode,,** No join mapping for specimenOwner ** 
inputs/UBC/Specimen/VegBIEN.csv
95 95
georeferenceSources,,** No join mapping for georeferenceSources ** 
96 96
georeferencedBy,,** No join mapping for georeferencedBy ** 
97 97
georeferencedDate,,** No join mapping for georeferencedDate ** 
98
institutionID,,** No non-empty join mapping for UNUSED ** 
98
institutionID,,** No non-empty join mapping for UNUSED#institutionID ** 
99 99
language,,** No join mapping for language ** 
100 100
modified,,** No join mapping for modified ** 
101 101
nomenclaturalCode,,** No join mapping for nomenclaturalCode ** 
inputs/bien_web/observation/map.csv
51 51
traitValue,measurementValue,,
52 52
traitUnit,*traitUnit,,
53 53
traitMethod,*traitMethod,,
54
observationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
55
dataSourceID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
56
dataSourceName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
57
dataSourceNamePrimary_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
58
plotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
59
observationType_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
60
bien2_taxonomyID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
61
bien2_DBPlotID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
62
bien2_ObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
63
bien2_OccurID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
64
taxonAuthorityVerbatim_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
65
higherPlantGroup_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
66
family_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
67
genus_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
68
species_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
69
taxon_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
70
taxonAuthor_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
71
taxonMorphospecies_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
72
rank_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
73
acceptance_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
74
country_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
75
stateProvince_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
76
collector_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
77
identifiedBy_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
78
plotCode_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
79
plotAreaHa_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
80
plotMinDbh_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
81
plotMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
82
isValidLatLong_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
83
isGeovalid_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
84
isNewWorld_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
85
isCultivated_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
86
isCultivatedReason_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
87
bien2_TraitObservationID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
88
traitName_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
89
traitMethod_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
90
traitUnit_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation
54
observationID_index,OMIT#observationID_index,,Placeholder column created by MySQL to PostgreSQL translation
55
dataSourceID_index,OMIT#dataSourceID_index,,Placeholder column created by MySQL to PostgreSQL translation
56
dataSourceName_index,OMIT#dataSourceName_index,,Placeholder column created by MySQL to PostgreSQL translation
57
dataSourceNamePrimary_index,OMIT#dataSourceNamePrimary_index,,Placeholder column created by MySQL to PostgreSQL translation
58
plotID_index,OMIT#plotID_index,,Placeholder column created by MySQL to PostgreSQL translation
59
observationType_index,OMIT#observationType_index,,Placeholder column created by MySQL to PostgreSQL translation
60
bien2_taxonomyID_index,OMIT#bien2_taxonomyID_index,,Placeholder column created by MySQL to PostgreSQL translation
61
bien2_DBPlotID_index,OMIT#bien2_DBPlotID_index,,Placeholder column created by MySQL to PostgreSQL translation
62
bien2_ObservationID_index,OMIT#bien2_ObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation
63
bien2_OccurID_index,OMIT#bien2_OccurID_index,,Placeholder column created by MySQL to PostgreSQL translation
64
taxonAuthorityVerbatim_index,OMIT#taxonAuthorityVerbatim_index,,Placeholder column created by MySQL to PostgreSQL translation
65
higherPlantGroup_index,OMIT#higherPlantGroup_index,,Placeholder column created by MySQL to PostgreSQL translation
66
family_index,OMIT#family_index,,Placeholder column created by MySQL to PostgreSQL translation
67
genus_index,OMIT#genus_index,,Placeholder column created by MySQL to PostgreSQL translation
68
species_index,OMIT#species_index,,Placeholder column created by MySQL to PostgreSQL translation
69
taxon_index,OMIT#taxon_index,,Placeholder column created by MySQL to PostgreSQL translation
70
taxonAuthor_index,OMIT#taxonAuthor_index,,Placeholder column created by MySQL to PostgreSQL translation
71
taxonMorphospecies_index,OMIT#taxonMorphospecies_index,,Placeholder column created by MySQL to PostgreSQL translation
72
rank_index,OMIT#rank_index,,Placeholder column created by MySQL to PostgreSQL translation
73
acceptance_index,OMIT#acceptance_index,,Placeholder column created by MySQL to PostgreSQL translation
74
country_index,OMIT#country_index,,Placeholder column created by MySQL to PostgreSQL translation
75
stateProvince_index,OMIT#stateProvince_index,,Placeholder column created by MySQL to PostgreSQL translation
76
collector_index,OMIT#collector_index,,Placeholder column created by MySQL to PostgreSQL translation
77
identifiedBy_index,OMIT#identifiedBy_index,,Placeholder column created by MySQL to PostgreSQL translation
78
plotCode_index,OMIT#plotCode_index,,Placeholder column created by MySQL to PostgreSQL translation
79
plotAreaHa_index,OMIT#plotAreaHa_index,,Placeholder column created by MySQL to PostgreSQL translation
80
plotMinDbh_index,OMIT#plotMinDbh_index,,Placeholder column created by MySQL to PostgreSQL translation
81
plotMethod_index,OMIT#plotMethod_index,,Placeholder column created by MySQL to PostgreSQL translation
82
isValidLatLong_index,OMIT#isValidLatLong_index,,Placeholder column created by MySQL to PostgreSQL translation
83
isGeovalid_index,OMIT#isGeovalid_index,,Placeholder column created by MySQL to PostgreSQL translation
84
isNewWorld_index,OMIT#isNewWorld_index,,Placeholder column created by MySQL to PostgreSQL translation
85
isCultivated_index,OMIT#isCultivated_index,,Placeholder column created by MySQL to PostgreSQL translation
86
isCultivatedReason_index,OMIT#isCultivatedReason_index,,Placeholder column created by MySQL to PostgreSQL translation
87
bien2_TraitObservationID_index,OMIT#bien2_TraitObservationID_index,,Placeholder column created by MySQL to PostgreSQL translation
88
traitName_index,OMIT#traitName_index,,Placeholder column created by MySQL to PostgreSQL translation
89
traitMethod_index,OMIT#traitMethod_index,,Placeholder column created by MySQL to PostgreSQL translation
90
traitUnit_index,OMIT#traitUnit_index,,Placeholder column created by MySQL to PostgreSQL translation
inputs/NY/Ecatalog_all/map.csv
1 1
NY,VegCore,Filter,Comments
2
pkey,OMIT,,"CatalogNumber, etc. is a better pkey"
3
key,OMIT,,"CatalogNumber, etc. is a better pkey"
2
pkey,OMIT#pkey,,"CatalogNumber, etc. is a better pkey"
3
key,OMIT#key,,"CatalogNumber, etc. is a better pkey"
4 4
DateLastModified,modified,,
5 5
InstitutionCode,specimenHolderInstitutions,,
6 6
CollectionCode,collection,,
......
21 21
MonthIdentified,monthIdentified,,
22 22
DayIdentified,dayIdentified,,
23 23
TypeStatus,typeStatus,,
24
CollectorNumber,UNUSED,,
24
CollectorNumber,UNUSED#CollectorNumber,,
25 25
FieldNumber,collectorNumber,,Usage inconsistent with DwC definition
26 26
Collector,recordedBy,,
27 27
YearCollected,yearCollected,,
......
53 53
PlantFungDescription,occurrenceRemarks,/_join/2,Contains the specimenDescription
54 54
Substrate,locality,"/_join/2/_label[label=""substrate""]/value",
55 55
Vegetation,locality,"/_join/3/_label[label=""vegetation""]/value",
56
UniqueNYInternalRecordNumber,OMIT,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID.
56
UniqueNYInternalRecordNumber,OMIT#UniqueNYInternalRecordNumber,,Sometimes duplicated. Omitted to avoid confusion since this is an internal-only ID.
inputs/Madidi/IndividualObservation/map.csv
22 22
CollectorAbbrev,recordedBy,/_first/3,
23 23
CurrentDet,scientificName,,
24 24
CurrentDetRank,taxonRank,,
25
CurrentDetFamily,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle"
25
CurrentDetFamily,OMIT#CurrentDetFamily,,"Omitted because includes *family* author, which TNRS can’t handle"
26 26
CurrentDetQualifier,identificationQualifier,,
27 27
RepresentativeSpecimenID,*RepresentativeSpecimenID,,
28 28
RepresentativeSpecimenSeniorCollector,*RepresentativeSpecimenSeniorCollector,,
......
30 30
RepresentativeSpecimenCollectorAbbreviation,*RepresentativeSpecimenCollectorAbbreviation,,
31 31
FieldFamilyFullName,originalFamily,,
32 32
FieldFamilyFullName,family,,
33
FieldFamilyHTML,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle"
33
FieldFamilyHTML,OMIT#FieldFamilyHTML,,"Omitted because includes *family* author, which TNRS can’t handle"
34 34
FieldNameFullName,originalTaxonName,,
35 35
FieldNameAuthors,originalScientificNameAuthorship,,
36
FieldNameHTML,OMIT,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
36
FieldNameHTML,OMIT#FieldNameHTML,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
37 37
MorphoSpeciesName,morphoname,,
38 38
CommonName,vernacularName,,
39 39
Circumference,*Circumference,,
......
53 53
TreeNotes,occurrenceRemarks,,
54 54
DNASample,*DNASample,,
55 55
IsAlive,*IsAlive,,
56
CompoundLeaf,UNUSED,,
57
CompoundLeafID,UNUSED,,
58
NumberFolioles1,UNUSED,,
59
NumberFolioles2,UNUSED,,
60
NumberFolioles3,UNUSED,,
61
NumberFolioles4,UNUSED,,
62
NumberFolioles5,UNUSED,,
63
SLAArea1,UNUSED,,
64
SLAArea2,UNUSED,,
65
SLAArea3,UNUSED,,
66
SLAArea4,UNUSED,,
67
SLAArea5,UNUSED,,
68
SLAArea6,UNUSED,,
69
SLAArea7,UNUSED,,
70
SLAArea8,UNUSED,,
71
SLAArea9,UNUSED,,
72
SLAArea10,UNUSED,,
73
SLAArea11,UNUSED,,
74
SLAArea12,UNUSED,,
75
SLAArea13,UNUSED,,
76
SLAArea14,UNUSED,,
77
SLAArea15,UNUSED,,
78
NumberFoliolules1,UNUSED,,
79
NumberFoliolules2,UNUSED,,
80
NumberFoliolules3,UNUSED,,
81
NumberFoliolules4,UNUSED,,
82
NumberFoliolules5,UNUSED,,
83
TotArea1,UNUSED,,
84
TotArea2,UNUSED,,
85
TotArea3,UNUSED,,
86
TotArea4,UNUSED,,
87
TotArea5,UNUSED,,
88
TotArea6,UNUSED,,
89
TotArea7,UNUSED,,
90
TotArea8,UNUSED,,
91
TotArea9,UNUSED,,
92
TotArea10,UNUSED,,
93
TotArea11,UNUSED,,
94
TotArea12,UNUSED,,
95
TotArea13,UNUSED,,
96
TotArea14,UNUSED,,
97
TotArea15,UNUSED,,
98
Weight1,UNUSED,,
99
Weight2,UNUSED,,
100
Weight3,UNUSED,,
101
Weight4,UNUSED,,
102
Weight5,UNUSED,,
103
Weight6,UNUSED,,
104
Weight7,UNUSED,,
105
Weight8,UNUSED,,
106
Weight9,UNUSED,,
107
Weight10,UNUSED,,
108
Weight11,UNUSED,,
109
Weight12,UNUSED,,
110
Weight13,UNUSED,,
111
Weight14,UNUSED,,
112
Weight15,UNUSED,,
113
Thickness1,UNUSED,,
114
Thickness2,UNUSED,,
115
Thickness3,UNUSED,,
116
Thickness4,UNUSED,,
117
Thickness5,UNUSED,,
118
Thickness6,UNUSED,,
119
Thickness7,UNUSED,,
120
Thickness8,UNUSED,,
121
Thickness9,UNUSED,,
122
Thickness10,UNUSED,,
123
Thickness11,UNUSED,,
124
Thickness12,UNUSED,,
125
Thickness13,UNUSED,,
126
Thickness14,UNUSED,,
127
Thickness15,UNUSED,,
128
LeafPhoto1,UNUSED,,
129
LeafPhoto2,UNUSED,,
130
LeafPhoto3,UNUSED,,
131
LeafPhoto4,UNUSED,,
132
LeafPhoto5,UNUSED,,
133
NitrogenContent,UNUSED,,
134
TreeLeaf3Notes,UNUSED,,
135
AreaRachis1,UNUSED,,
136
AreaRachis2,UNUSED,,
137
AreaRachis3,UNUSED,,
138
AreaRachis4,UNUSED,,
139
AreaRachis5,UNUSED,,
140
WeightRachis1,UNUSED,,
141
WeightRachis2,UNUSED,,
142
WeightRachis3,UNUSED,,
143
WeightRachis4,UNUSED,,
144
WeightRachis5,UNUSED,,
145
RachisPhoto1,UNUSED,,
146
RachisPhoto2,UNUSED,,
147
RachisPhoto3,UNUSED,,
148
RachisPhoto4,UNUSED,,
149
RachisPhoto5,UNUSED,,
150
DiameterWithBark,UNUSED,,
151
DiameterWithoutBark,UNUSED,,
152
Volume1,UNUSED,,
153
Volume2,UNUSED,,
154
DryWeight,UNUSED,,
155
VesselNumber,UNUSED,,
156
VesselArea,UNUSED,,
157
NumberOfLeaves,UNUSED,,
158
WeightOfBranch,UNUSED,,
159
AreaRachilla1,UNUSED,,
160
AreaRachilla2,UNUSED,,
161
AreaRachilla3,UNUSED,,
162
AreaRachilla4,UNUSED,,
163
AreaRachilla5,UNUSED,,
164
WeightRachilla1,UNUSED,,
165
WeightRachilla2,UNUSED,,
166
WeightRachilla3,UNUSED,,
167
WeightRachilla4,UNUSED,,
168
WeightRachilla5,UNUSED,,
169
TreeTrunkNotes,UNUSED,,
170
RemainingTrunkHeight,UNUSED,,
171
HeightButtresses,UNUSED,,
172
WidthButtresses,UNUSED,,
173
DirectionOfFall,UNUSED,,
174
MortalityType,UNUSED,,
175
CauseOfDeath1,UNUSED,,
176
CauseOfDeath2,UNUSED,,
177
CauseOfDeath3,UNUSED,,
178
CauseOfDeath4,UNUSED,,
179
CauseOfDeath5,UNUSED,,
180
Decomposition,UNUSED,,
181
MultipleFalls,UNUSED,,
182
TreeMortalityNotes,UNUSED,,
56
CompoundLeaf,UNUSED#CompoundLeaf,,
57
CompoundLeafID,UNUSED#CompoundLeafID,,
58
NumberFolioles1,UNUSED#NumberFolioles1,,
59
NumberFolioles2,UNUSED#NumberFolioles2,,
60
NumberFolioles3,UNUSED#NumberFolioles3,,
61
NumberFolioles4,UNUSED#NumberFolioles4,,
62
NumberFolioles5,UNUSED#NumberFolioles5,,
63
SLAArea1,UNUSED#SLAArea1,,
64
SLAArea2,UNUSED#SLAArea2,,
65
SLAArea3,UNUSED#SLAArea3,,
66
SLAArea4,UNUSED#SLAArea4,,
67
SLAArea5,UNUSED#SLAArea5,,
68
SLAArea6,UNUSED#SLAArea6,,
69
SLAArea7,UNUSED#SLAArea7,,
70
SLAArea8,UNUSED#SLAArea8,,
71
SLAArea9,UNUSED#SLAArea9,,
72
SLAArea10,UNUSED#SLAArea10,,
73
SLAArea11,UNUSED#SLAArea11,,
74
SLAArea12,UNUSED#SLAArea12,,
75
SLAArea13,UNUSED#SLAArea13,,
76
SLAArea14,UNUSED#SLAArea14,,
77
SLAArea15,UNUSED#SLAArea15,,
78
NumberFoliolules1,UNUSED#NumberFoliolules1,,
79
NumberFoliolules2,UNUSED#NumberFoliolules2,,
80
NumberFoliolules3,UNUSED#NumberFoliolules3,,
81
NumberFoliolules4,UNUSED#NumberFoliolules4,,
82
NumberFoliolules5,UNUSED#NumberFoliolules5,,
83
TotArea1,UNUSED#TotArea1,,
84
TotArea2,UNUSED#TotArea2,,
85
TotArea3,UNUSED#TotArea3,,
86
TotArea4,UNUSED#TotArea4,,
87
TotArea5,UNUSED#TotArea5,,
88
TotArea6,UNUSED#TotArea6,,
89
TotArea7,UNUSED#TotArea7,,
90
TotArea8,UNUSED#TotArea8,,
91
TotArea9,UNUSED#TotArea9,,
92
TotArea10,UNUSED#TotArea10,,
93
TotArea11,UNUSED#TotArea11,,
94
TotArea12,UNUSED#TotArea12,,
95
TotArea13,UNUSED#TotArea13,,
96
TotArea14,UNUSED#TotArea14,,
97
TotArea15,UNUSED#TotArea15,,
98
Weight1,UNUSED#Weight1,,
99
Weight2,UNUSED#Weight2,,
100
Weight3,UNUSED#Weight3,,
101
Weight4,UNUSED#Weight4,,
102
Weight5,UNUSED#Weight5,,
103
Weight6,UNUSED#Weight6,,
104
Weight7,UNUSED#Weight7,,
105
Weight8,UNUSED#Weight8,,
106
Weight9,UNUSED#Weight9,,
107
Weight10,UNUSED#Weight10,,
108
Weight11,UNUSED#Weight11,,
109
Weight12,UNUSED#Weight12,,
110
Weight13,UNUSED#Weight13,,
111
Weight14,UNUSED#Weight14,,
112
Weight15,UNUSED#Weight15,,
113
Thickness1,UNUSED#Thickness1,,
114
Thickness2,UNUSED#Thickness2,,
115
Thickness3,UNUSED#Thickness3,,
116
Thickness4,UNUSED#Thickness4,,
117
Thickness5,UNUSED#Thickness5,,
118
Thickness6,UNUSED#Thickness6,,
119
Thickness7,UNUSED#Thickness7,,
120
Thickness8,UNUSED#Thickness8,,
121
Thickness9,UNUSED#Thickness9,,
122
Thickness10,UNUSED#Thickness10,,
123
Thickness11,UNUSED#Thickness11,,
124
Thickness12,UNUSED#Thickness12,,
125
Thickness13,UNUSED#Thickness13,,
126
Thickness14,UNUSED#Thickness14,,
127
Thickness15,UNUSED#Thickness15,,
128
LeafPhoto1,UNUSED#LeafPhoto1,,
129
LeafPhoto2,UNUSED#LeafPhoto2,,
130
LeafPhoto3,UNUSED#LeafPhoto3,,
131
LeafPhoto4,UNUSED#LeafPhoto4,,
132
LeafPhoto5,UNUSED#LeafPhoto5,,
133
NitrogenContent,UNUSED#NitrogenContent,,
134
TreeLeaf3Notes,UNUSED#TreeLeaf3Notes,,
135
AreaRachis1,UNUSED#AreaRachis1,,
136
AreaRachis2,UNUSED#AreaRachis2,,
137
AreaRachis3,UNUSED#AreaRachis3,,
138
AreaRachis4,UNUSED#AreaRachis4,,
139
AreaRachis5,UNUSED#AreaRachis5,,
140
WeightRachis1,UNUSED#WeightRachis1,,
141
WeightRachis2,UNUSED#WeightRachis2,,
142
WeightRachis3,UNUSED#WeightRachis3,,
143
WeightRachis4,UNUSED#WeightRachis4,,
144
WeightRachis5,UNUSED#WeightRachis5,,
145
RachisPhoto1,UNUSED#RachisPhoto1,,
146
RachisPhoto2,UNUSED#RachisPhoto2,,
147
RachisPhoto3,UNUSED#RachisPhoto3,,
148
RachisPhoto4,UNUSED#RachisPhoto4,,
149
RachisPhoto5,UNUSED#RachisPhoto5,,
150
DiameterWithBark,UNUSED#DiameterWithBark,,
151
DiameterWithoutBark,UNUSED#DiameterWithoutBark,,
152
Volume1,UNUSED#Volume1,,
153
Volume2,UNUSED#Volume2,,
154
DryWeight,UNUSED#DryWeight,,
155
VesselNumber,UNUSED#VesselNumber,,
156
VesselArea,UNUSED#VesselArea,,
157
NumberOfLeaves,UNUSED#NumberOfLeaves,,
158
WeightOfBranch,UNUSED#WeightOfBranch,,
159
AreaRachilla1,UNUSED#AreaRachilla1,,
160
AreaRachilla2,UNUSED#AreaRachilla2,,
161
AreaRachilla3,UNUSED#AreaRachilla3,,
162
AreaRachilla4,UNUSED#AreaRachilla4,,
163
AreaRachilla5,UNUSED#AreaRachilla5,,
164
WeightRachilla1,UNUSED#WeightRachilla1,,
165
WeightRachilla2,UNUSED#WeightRachilla2,,
166
WeightRachilla3,UNUSED#WeightRachilla3,,
167
WeightRachilla4,UNUSED#WeightRachilla4,,
168
WeightRachilla5,UNUSED#WeightRachilla5,,
169
TreeTrunkNotes,UNUSED#TreeTrunkNotes,,
170
RemainingTrunkHeight,UNUSED#RemainingTrunkHeight,,
171
HeightButtresses,UNUSED#HeightButtresses,,
172
WidthButtresses,UNUSED#WidthButtresses,,
173
DirectionOfFall,UNUSED#DirectionOfFall,,
174
MortalityType,UNUSED#MortalityType,,
175
CauseOfDeath1,UNUSED#CauseOfDeath1,,
176
CauseOfDeath2,UNUSED#CauseOfDeath2,,
177
CauseOfDeath3,UNUSED#CauseOfDeath3,,
178
CauseOfDeath4,UNUSED#CauseOfDeath4,,
179
CauseOfDeath5,UNUSED#CauseOfDeath5,,
180
Decomposition,UNUSED#Decomposition,,
181
MultipleFalls,UNUSED#MultipleFalls,,
182
TreeMortalityNotes,UNUSED#TreeMortalityNotes,,
inputs/Madidi/map.csv
29 29
CollectorStringShortened,recordedBy,/_first/2,
30 30
Conductividad electrica (ASPT 6–µS/cm– 1 - 10000),conductivity,,
31 31
CurrentDet,scientificName,,
32
CurrentDetFamily,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle"
32
CurrentDetFamily,OMIT#CurrentDetFamily,,"Omitted because includes *family* author, which TNRS can’t handle"
33 33
CurrentDetQualifier,identificationQualifier,,
34 34
CurrentDetRank,taxonRank,,
35 35
Determined by,identifiedBy,,
......
43 43
Field family,originalFamily,,
44 44
Field name,originalGenus,,Often = Genera
45 45
FieldFamilyFullName,originalFamily,,
46
FieldFamilyHTML,OMIT,,"Omitted because includes *family* author, which TNRS can’t handle"
46
FieldFamilyHTML,OMIT#FieldFamilyHTML,,"Omitted because includes *family* author, which TNRS can’t handle"
47 47
FieldNameAuthors,originalScientificNameAuthorship,,
48 48
FieldNameFullName,originalTaxonName,,
49
FieldNameHTML,OMIT,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
49
FieldNameHTML,OMIT#FieldNameHTML,,Adds HTML formatting to FieldNameFullName+FieldNameAuthors
50 50
First evaluation,eventDate,,
51 51
Fósforo disponible (ISRIC 14-2–mg/Kg–1.5),phosphorus_percent,,Assuming units are % based on the range of values
52 52
Genera,genus,,
inputs/CVS/stemCount_/VegBIEN.csv
32 32
stemHeightAccuracy,,** No join mapping for *stemheightaccuracy ** 
33 33
stemTaxonArea,,** No join mapping for *stemtaxonarea ** 
34 34
stratum_ID,,** No join mapping for *stratum_id ** 
35
taxonImportance_ID,,** No non-empty join mapping for OMIT ** Omitted because STEMCOUNT_ID is more specific
... This diff was truncated because it exceeds the maximum size that can be displayed.

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