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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10267 over 11 years Aaron Marcuse-Kubitza backups/Makefile: %.backup/restore: documented ...
  bin 10283 over 11 years Aaron Marcuse-Kubitza bugfix: bin/*: spell out [:alnum:] as [a-zA-Z0-...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 over 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10281 over 11 years Aaron Marcuse-Kubitza inputs/bien_web/observation/VegBIEN.csv: regene...
  lib 10276 over 11 years Aaron Marcuse-Kubitza lib/runscripts/table.run: postprocess(): propag...
  mappings 10173 over 11 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: cultivated, oldGr...
  planning 10266 over 11 years Aaron Marcuse-Kubitza planning/workflow/bien3_architecture.pptx: expo...
  schemas 10259 over 11 years Aaron Marcuse-Kubitza inputs/newWorld/: switched to new-style import,...
  web 10282 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 over 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.6 KB 10223 over 11 years Aaron Marcuse-Kubitza /Makefile: mysql-Linux: also install mysql-work...
README.TXT 23.2 KB 10222 over 11 years Aaron Marcuse-Kubitza /README.TXT: Maintenance: to backup files not i...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 over 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10283 07/14/2013 05:52 AM Aaron Marcuse-Kubitza

bugfix: bin/*: spell out [:alnum:] as [a-zA-Z0-9] because Python unfortunately doesn't support character classes

10282 07/14/2013 05:18 AM Aaron Marcuse-Kubitza

web/links/index.htm: updated to Firefox bookmarks. moved Linux, Mac into Unix folder. added instructions to remove old Linux kernels, which fill up the /boot partition. added instructions to force sed to use raw binary mode instead of UTF-8 when UTF-8 is set in the environment. added methods of implementing DB disk space quotas in Postgres. added comparison on my Mac's CPU (2.66 GHz Intel Core i5) with vegbiendev's (2.44 GHz AMD Phenom X4). my Mac's seems to be much faster, so it might make sense to check that the Thor CPUs are faster than the Vis Lab computers' CPUs the next time it gets upgraded. (these diffs can be seen in WinMerge with Moved block detection on. see /README.TXT > WinMerge setup for details.)

10281 07/14/2013 04:43 AM Aaron Marcuse-Kubitza

inputs/bien_web/observation/VegBIEN.csv: regenerated now that *_index dummy columns have been removed

10280 07/14/2013 03:26 AM Aaron Marcuse-Kubitza

inputs/.TNRS/schema.sql: tnrs_populate_fields(): updated runtimes. it now takes 25 min instead of 16 min to regenerate the derived cols.

10279 07/14/2013 03:07 AM Aaron Marcuse-Kubitza

inputs/IRMNG/_README.TXT: added note that when refreshing this datasource, remember to regenerate the TNRS derived cols using the instructions in inputs/.TNRS/schema.sql > tnrs_populate_fields()

10278 07/14/2013 02:44 AM Aaron Marcuse-Kubitza

bin/*: replaced confusing regexp constructs involving \W inside [] with the much clearer explicit character class [:alnum:] . this avoids adding or subtracting from an inverted class in order to reach a subset of the corresponding positive class, because the subset can just be named explicitly instead.

10277 07/14/2013 02:38 AM Aaron Marcuse-Kubitza

bugfix: bin/repl: doesn't make sense to use other chars in a [^\W_] regexp, because they will have no effect since \w doesn't include the other chars to begin with. this is a result of confusion with the ^ and \W double negative.

10276 07/14/2013 02:14 AM Aaron Marcuse-Kubitza

lib/runscripts/table.run: postprocess(): propagate the $remake flag to remake_VegBIEN_mappings using self_make, so that a remake=1 on postprocess will cause map.csv to be regenerated as it would for a remake=1 directly on remake_VegBIEN_mappings

10275 07/14/2013 02:10 AM Aaron Marcuse-Kubitza

bugfix: postprocess(): moved $can_test flag from import() to this function because it is used here

10274 07/14/2013 02:08 AM Aaron Marcuse-Kubitza

lib/runscripts/table.run: import(): moved postprocessing commands to separate postprocess() function that can be invoked on an already-imported staging table to avoid running the load_data() target. this is especially useful when running the postprocessing on a working copy without the unversioned data files, for datasources whose load_data() target would otherwise try to download the files because they don't already exist.

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