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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 about 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 10267 almost 11 years Aaron Marcuse-Kubitza backups/Makefile: %.backup/restore: documented ...
  bin 10348 almost 11 years Aaron Marcuse-Kubitza bugfix: bin/repl: text mode: repurpose this to ...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 9928 about 11 years Aaron Marcuse-Kubitza added exports/_archive/
  inputs 10436 almost 11 years Aaron Marcuse-Kubitza inputs/SpeciesLink/Specimen/map.csv: remapped D...
  lib 10402 almost 11 years Aaron Marcuse-Kubitza lib/sh/db.sh: mk_select(): support passing $col...
  mappings 10420 almost 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: regenerated from wiki. ad...
  planning 10429 almost 11 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: Adding der...
  schemas 10437 almost 11 years Aaron Marcuse-Kubitza schemas/VegCore/VegCore.my.sql: regenerated fro...
  web 10306 almost 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 about 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
.rsync_filter.upload 33 Bytes 10042 about 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
.rsync_ignore 12 Bytes 10042 about 11 years Aaron Marcuse-Kubitza /.rsync_ignore: temp files: hide them on upload...
Makefile 12.6 KB 10223 almost 11 years Aaron Marcuse-Kubitza /Makefile: mysql-Linux: also install mysql-work...
README.TXT 23.3 KB 10379 almost 11 years Aaron Marcuse-Kubitza /README.TXT: Maintenance: added instructions fo...
fix_perms 97 Bytes 7560 over 11 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 over 11 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 over 11 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 433 Bytes 9916 about 11 years Aaron Marcuse-Kubitza /run: geoscrub_input/make(): documented runtime...
unmapped_terms.csv 13.1 KB 7201 over 11 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
10437 07/26/2013 01:22 PM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.my.sql: regenerated from .mwb schema, which apparently reverses the order of the fkeys (possibly a Linux MySQL bug?)
10436 07/26/2013 12:26 PM Aaron Marcuse-Kubitza

inputs/SpeciesLink/Specimen/map.csv: remapped Darwin Core synonyms to DUPLICATE. this avoids the need to translate these to postprocessing derived columns for new-style import, and also speeds up column-based import because there are less automatic alts to perform to resolve filter-less collisions. the svn diff was verified by replacing DUPLICATE#of:dwc_terms<term>#... with <term>, removing the comment, and checking that this removes the diff (except where VegCore has renamed a DwC term).
10435 07/26/2013 12:17 PM Aaron Marcuse-Kubitza

bugfix: inputs/SpeciesLink/Specimen/map.csv: *scientificName: remapped to scientificName instead of taxonName to match the DwC term's name (this is the same dwc_terms_scientificName mismapping that was fixed in r10434)
10434 07/26/2013 11:56 AM Aaron Marcuse-Kubitza

bugfix: inputs/SpeciesLink/Specimen/map.csv: dwc_terms_scientificName: remapped to scientificName instead of taxonName to match that DwC term name, as well as the mappings of other *scientificName terms
10433 07/26/2013 11:06 AM Aaron Marcuse-Kubitza

inputs/SpeciesLink/Specimen/map.csv: marked dwc_geospatial_VerbatimLatitude,Longitude as exact duplicates of dwc_terms_*
10432 07/26/2013 10:52 AM Aaron Marcuse-Kubitza

inputs/SpeciesLink/Specimen/map.csv: remapped identical _alt-ed fields to DUPLICATE. this avoids the need to translate these to postprocessing derived columns for new-style import, and also speeds up column-based import because there are less automatic _alts to perform to resolve filter-less collisions.
10431 07/26/2013 10:06 AM Aaron Marcuse-Kubitza

bugfix: inputs/SpeciesLink/Specimen/map.csv: *CollectorNumber: moved these to the same _alt group as recordNumber, because they are actually duplicates
10430 07/26/2013 09:43 AM Aaron Marcuse-Kubitza

correction: inputs/SpeciesLink/Specimen/map.csv: FieldNumber: fixed incorrect comment that these fields are identical to recordNumber, when instead they have the same *meaning but not the same values. instead, values are stored under either of the two terms. the previous conclusion had been based on an incorrect query, which used != instead of the NULL-sensitive IS NOT DISTINCT FROM.
10429 07/25/2013 08:14 PM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: Adding derived columns: extended to overlap with all subtasks
10428 07/25/2013 08:12 PM Aaron Marcuse-Kubitza

planning/timeline/timeline.2013.xls: Geoscrubbing: split into separate re-run and automated pipeline tasks

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