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-- MySQL dump 10.13 Distrib 5.5.31, for debian-linux-gnu (x86_64)
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-- Host: localhost Database: VegCore
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-- ------------------------------------------------------
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-- Server version 5.5.31-0ubuntu0.12.04.2
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/*!40101 SET @OLD_CHARACTER_SET_CLIENT=@@CHARACTER_SET_CLIENT */;
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/*!40101 SET @OLD_CHARACTER_SET_RESULTS=@@CHARACTER_SET_RESULTS */;
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--
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-- Table structure for table `aggregate_observation`
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--
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/*!40101 SET @saved_cs_client = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `aggregate_observation` (
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`id` varbinary(767) NOT NULL,
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`taxon_concept` varbinary(767) NOT NULL,
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`traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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PRIMARY KEY (`id`),
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KEY `fk_aggregate_observation_taxon_name1_idx` (`taxon_concept`),
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CONSTRAINT `fk_aggregate_observation_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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CONSTRAINT `fk_aggregate_observation_taxon_name1` FOREIGN KEY (`taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"An observation applying to all occurrences of an organism based on an aggregation factor" ("VegX":http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/aggregateOrganismObservations/aggregateOrganismObservation)';
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--
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-- Dumping data for table `aggregate_observation`
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--
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-- Table structure for table `base_class`
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CREATE TABLE `base_class` (
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`id` varbinary(767) NOT NULL,
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`referenced_class` varbinary(767) NOT NULL,
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PRIMARY KEY (`id`),
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KEY `fk_base_class_referenced_class1_idx` (`referenced_class`),
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CONSTRAINT `fk_base_class_referenced_class1` FOREIGN KEY (`referenced_class`) REFERENCES `referenced_class` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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--
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-- Table structure for table `collection`
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CREATE TABLE `collection` (
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`id` varbinary(767) NOT NULL,
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`institution` varbinary(767) NOT NULL,
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`name` varbinary(767) NOT NULL,
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PRIMARY KEY (`id`),
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UNIQUE KEY `collection_unique` (`institution`,`name`),
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KEY `fk_collection_organization1_idx` (`institution`),
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KEY `fk_collection_source1_idx` (`id`),
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CONSTRAINT `fk_collection_source1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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CONSTRAINT `fk_collection_organization1` FOREIGN KEY (`institution`) REFERENCES `organization` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"the collection within the institution where a specimen is held" ("Brad Boyle":https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/collectionCode)';
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-- Dumping data for table `collection`
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--
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-- Table structure for table `community`
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CREATE TABLE `community` (
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`id` varbinary(767) NOT NULL,
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`name` varbinary(767) NOT NULL,
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`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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PRIMARY KEY (`id`),
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CONSTRAINT `fk_community_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A community type is an abstract grouping of organisms that tend to co-occur on the landscape due to shared ecological requirements or preferences. May be designated by syntaxon or physiognomic types." ([[VegCore#VegX|VegX]])';
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--
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-- Table structure for table `coordinates`
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CREATE TABLE `coordinates` (
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`id` varbinary(767) NOT NULL,
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`latitude_deg` varbinary(767) DEFAULT NULL,
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`longitude_deg` varbinary(767) DEFAULT NULL,
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PRIMARY KEY (`id`)
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A numerically-defined point';
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--
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-- Table structure for table `derived_class`
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CREATE TABLE `derived_class` (
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`id` varbinary(767) NOT NULL,
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PRIMARY KEY (`id`),
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CONSTRAINT `fk_derived_class_base_class1` FOREIGN KEY (`id`) REFERENCES `base_class` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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--
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-- Table structure for table `event`
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--
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CREATE TABLE `event` (
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`id` varbinary(767) NOT NULL,
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`parent` varbinary(767) NOT NULL,
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`name` varbinary(767) DEFAULT NULL,
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`date_range` varbinary(767) DEFAULT NULL,
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`place` varbinary(767) DEFAULT NULL,
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`method` varbinary(767) DEFAULT NULL,
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PRIMARY KEY (`id`),
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KEY `fk_event_place1_idx` (`place`),
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KEY `fk_event1_idx` (`parent`),
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KEY `fk_event_method1_idx` (`method`),
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CONSTRAINT `fk_event_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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CONSTRAINT `fk_event_place1` FOREIGN KEY (`place`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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CONSTRAINT `fk_event1` FOREIGN KEY (`parent`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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CONSTRAINT `fk_event_method1` FOREIGN KEY (`method`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"an action that occurs at a place and during a period of time" ("DwC":http://rs.tdwg.org/dwc/terms/#Event)';
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--
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-- Dumping data for table `event`
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--
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-- Table structure for table `event_participant`
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--
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CREATE TABLE `event_participant` (
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`event` varbinary(767) NOT NULL,
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`party` varbinary(767) NOT NULL,
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`sort_order` int(11) DEFAULT NULL,
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PRIMARY KEY (`event`,`party`),
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KEY `fk_event_has_party_party1_idx` (`party`),
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KEY `fk_event_has_party_event1_idx` (`event`),
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CONSTRAINT `fk_event_has_party_event1` FOREIGN KEY (`event`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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CONSTRAINT `fk_event_has_party_party1` FOREIGN KEY (`party`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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--
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-- Dumping data for table `event_participant`
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--
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-- Table structure for table `geological_context`
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--
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CREATE TABLE `geological_context` (
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`id` varbinary(767) NOT NULL,
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`name` varbinary(767) NOT NULL,
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`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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PRIMARY KEY (`id`),
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CONSTRAINT `fk_geological_context_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"information pertaining to a location within a geological context, such as stratigraphy" ("DwC":http://rs.tdwg.org/dwc/terms/#GeologicalContext)';
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--
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-- Dumping data for table `geological_context`
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--
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--
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-- Table structure for table `geovalidation`
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--
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CREATE TABLE `geovalidation` (
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`id` varbinary(767) NOT NULL,
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`geovalid` tinyint(1) NOT NULL,
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`lat_long_domain_valid` tinyint(1) NOT NULL,
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`lat_long_in_ranks` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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PRIMARY KEY (`id`),
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CONSTRAINT `fk_geovalidation_validatable_place1` FOREIGN KEY (`id`) REFERENCES `validatable_place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='The accuracy of the [[VegCore#Coordinates|Coordinates]], taking into account the [[VegCore#Placename|Placename]]';
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/*!40101 SET character_set_client = @saved_cs_client */;
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--
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-- Dumping data for table `geovalidation`
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--
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/*!40000 ALTER TABLE `geovalidation` DISABLE KEYS */;
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/*!40000 ALTER TABLE `geovalidation` ENABLE KEYS */;
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--
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-- Table structure for table `individual`
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--
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CREATE TABLE `individual` (
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`id` varbinary(767) NOT NULL,
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`tag` varbinary(767) DEFAULT NULL,
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PRIMARY KEY (`id`),
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CONSTRAINT `fk_individual_record1` FOREIGN KEY (`id`) REFERENCES `taxon_occurrence` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A distinct biological organism';
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--
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-- Dumping data for table `individual`
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--
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/*!40000 ALTER TABLE `individual` DISABLE KEYS */;
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--
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-- Table structure for table `individual_observation`
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--
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CREATE TABLE `individual_observation` (
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`id` varbinary(767) NOT NULL,
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`individual` varbinary(767) DEFAULT NULL,
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`code` varbinary(767) DEFAULT NULL,
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`traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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PRIMARY KEY (`id`),
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KEY `fk_individual_observation_individual1_idx` (`individual`),
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CONSTRAINT `fk_individual_observation_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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CONSTRAINT `fk_individual_observation_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of an [[VegCore#Individual|Individual]]';
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--
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-- Dumping data for table `individual_observation`
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--
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--
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-- Table structure for table `method`
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--
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CREATE TABLE `method` (
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`id` varbinary(767) NOT NULL,
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`parent` varbinary(767) NOT NULL,
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`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
310
|
PRIMARY KEY (`id`),
|
|
311
|
KEY `fk_method_method1_idx` (`parent`),
|
|
312
|
CONSTRAINT `fk_method_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
313
|
CONSTRAINT `fk_method_method1` FOREIGN KEY (`parent`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
314
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A specific method definition followed in the creation of the dataset. Each method links to a protocol and literature citation reference. A protocol may have many method or steps." ("VegX":http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/methods/method)';
|
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315
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
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316
|
|
|
317
|
--
|
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318
|
-- Dumping data for table `method`
|
|
319
|
--
|
|
320
|
|
|
321
|
/*!40000 ALTER TABLE `method` DISABLE KEYS */;
|
|
322
|
/*!40000 ALTER TABLE `method` ENABLE KEYS */;
|
|
323
|
|
|
324
|
--
|
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325
|
-- Table structure for table `organization`
|
|
326
|
--
|
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327
|
|
|
328
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
329
|
/*!40101 SET character_set_client = utf8 */;
|
|
330
|
CREATE TABLE `organization` (
|
|
331
|
`id` varbinary(767) NOT NULL,
|
|
332
|
`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
333
|
PRIMARY KEY (`id`),
|
|
334
|
CONSTRAINT `fk_organization_party1` FOREIGN KEY (`id`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
335
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
336
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
337
|
|
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|
--
|
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339
|
-- Dumping data for table `organization`
|
|
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|
--
|
|
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|
|
|
342
|
/*!40000 ALTER TABLE `organization` DISABLE KEYS */;
|
|
343
|
/*!40000 ALTER TABLE `organization` ENABLE KEYS */;
|
|
344
|
|
|
345
|
--
|
|
346
|
-- Table structure for table `parsed_taxon_assertion`
|
|
347
|
--
|
|
348
|
|
|
349
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
350
|
/*!40101 SET character_set_client = utf8 */;
|
|
351
|
CREATE TABLE `parsed_taxon_assertion` (
|
|
352
|
`id` varbinary(767) NOT NULL,
|
|
353
|
`matched_taxon_concept` varbinary(767) DEFAULT NULL,
|
|
354
|
`match_score` float DEFAULT NULL,
|
|
355
|
`match_info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
356
|
PRIMARY KEY (`id`),
|
|
357
|
KEY `fk_parsed_taxon_assertion_taxon_name1_idx` (`matched_taxon_concept`),
|
|
358
|
CONSTRAINT `fk_matched_taxon_qualified_taxon10` FOREIGN KEY (`id`) REFERENCES `taxon_assertion` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
359
|
CONSTRAINT `fk_parsed_taxon_assertion_taxon_name1` FOREIGN KEY (`matched_taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
360
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
361
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
362
|
|
|
363
|
--
|
|
364
|
-- Dumping data for table `parsed_taxon_assertion`
|
|
365
|
--
|
|
366
|
|
|
367
|
/*!40000 ALTER TABLE `parsed_taxon_assertion` DISABLE KEYS */;
|
|
368
|
/*!40000 ALTER TABLE `parsed_taxon_assertion` ENABLE KEYS */;
|
|
369
|
|
|
370
|
--
|
|
371
|
-- Table structure for table `party`
|
|
372
|
--
|
|
373
|
|
|
374
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
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|
/*!40101 SET character_set_client = utf8 */;
|
|
376
|
CREATE TABLE `party` (
|
|
377
|
`id` varbinary(767) NOT NULL,
|
|
378
|
`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
379
|
PRIMARY KEY (`id`),
|
|
380
|
CONSTRAINT `fk_collection_source10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
381
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
382
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
383
|
|
|
384
|
--
|
|
385
|
-- Dumping data for table `party`
|
|
386
|
--
|
|
387
|
|
|
388
|
/*!40000 ALTER TABLE `party` DISABLE KEYS */;
|
|
389
|
/*!40000 ALTER TABLE `party` ENABLE KEYS */;
|
|
390
|
|
|
391
|
--
|
|
392
|
-- Table structure for table `place`
|
|
393
|
--
|
|
394
|
|
|
395
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
396
|
/*!40101 SET character_set_client = utf8 */;
|
|
397
|
CREATE TABLE `place` (
|
|
398
|
`id` varbinary(767) NOT NULL,
|
|
399
|
`parent` varbinary(767) NOT NULL,
|
|
400
|
`coordinates` varbinary(767) DEFAULT NULL,
|
|
401
|
`path` varbinary(767) DEFAULT NULL,
|
|
402
|
`locality` varbinary(767) DEFAULT NULL,
|
|
403
|
PRIMARY KEY (`id`),
|
|
404
|
KEY `fk_place_coordinates1_idx` (`coordinates`),
|
|
405
|
KEY `fk_place1_idx` (`parent`),
|
|
406
|
KEY `fk_place_place_path1_idx` (`path`),
|
|
407
|
CONSTRAINT `fk_place_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
408
|
CONSTRAINT `fk_place_coordinates1` FOREIGN KEY (`coordinates`) REFERENCES `coordinates` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
409
|
CONSTRAINT `fk_place1` FOREIGN KEY (`parent`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
410
|
CONSTRAINT `fk_place_place_path1` FOREIGN KEY (`path`) REFERENCES `place_path` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
411
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A spatial region" ("DwC":http://rs.tdwg.org/dwc/terms/#dcterms:Location) or point';
|
|
412
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
413
|
|
|
414
|
--
|
|
415
|
-- Dumping data for table `place`
|
|
416
|
--
|
|
417
|
|
|
418
|
/*!40000 ALTER TABLE `place` DISABLE KEYS */;
|
|
419
|
/*!40000 ALTER TABLE `place` ENABLE KEYS */;
|
|
420
|
|
|
421
|
--
|
|
422
|
-- Table structure for table `place_observation`
|
|
423
|
--
|
|
424
|
|
|
425
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
426
|
/*!40101 SET character_set_client = utf8 */;
|
|
427
|
CREATE TABLE `place_observation` (
|
|
428
|
`id` varbinary(767) NOT NULL,
|
|
429
|
`place` varbinary(767) NOT NULL,
|
|
430
|
`elevation_m` double DEFAULT NULL,
|
|
431
|
`slope_incline_deg` double DEFAULT NULL,
|
|
432
|
`slope_direction_deg_N` double DEFAULT NULL,
|
|
433
|
`geological_context` varbinary(767) DEFAULT NULL,
|
|
434
|
`community` varbinary(767) DEFAULT NULL,
|
|
435
|
`observations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
436
|
PRIMARY KEY (`id`),
|
|
437
|
KEY `fk_place_observation_place1_idx` (`place`),
|
|
438
|
KEY `fk_place_observation_geological_context1_idx` (`geological_context`),
|
|
439
|
KEY `fk_place_observation_community1_idx` (`community`),
|
|
440
|
KEY `fk_place_observation_event1_idx` (`id`),
|
|
441
|
CONSTRAINT `fk_place_observation_place1` FOREIGN KEY (`place`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
442
|
CONSTRAINT `fk_place_observation_geological_context1` FOREIGN KEY (`geological_context`) REFERENCES `geological_context` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
443
|
CONSTRAINT `fk_place_observation_community1` FOREIGN KEY (`community`) REFERENCES `community` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
444
|
CONSTRAINT `fk_place_observation_event1` FOREIGN KEY (`id`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
445
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A sampling of a [[VegCore#Location|Location]]';
|
|
446
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
447
|
|
|
448
|
--
|
|
449
|
-- Dumping data for table `place_observation`
|
|
450
|
--
|
|
451
|
|
|
452
|
/*!40000 ALTER TABLE `place_observation` DISABLE KEYS */;
|
|
453
|
/*!40000 ALTER TABLE `place_observation` ENABLE KEYS */;
|
|
454
|
|
|
455
|
--
|
|
456
|
-- Table structure for table `place_path`
|
|
457
|
--
|
|
458
|
|
|
459
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
460
|
/*!40101 SET character_set_client = utf8 */;
|
|
461
|
CREATE TABLE `place_path` (
|
|
462
|
`id` varbinary(767) NOT NULL,
|
|
463
|
`continent` varbinary(767) DEFAULT NULL,
|
|
464
|
`country` varbinary(767) DEFAULT NULL,
|
|
465
|
`state_province` varbinary(767) DEFAULT NULL,
|
|
466
|
`county` varbinary(767) DEFAULT NULL,
|
|
467
|
`municipality` varbinary(767) DEFAULT NULL,
|
|
468
|
`ranks` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
469
|
PRIMARY KEY (`id`)
|
|
470
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A named region';
|
|
471
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
472
|
|
|
473
|
--
|
|
474
|
-- Dumping data for table `place_path`
|
|
475
|
--
|
|
476
|
|
|
477
|
/*!40000 ALTER TABLE `place_path` DISABLE KEYS */;
|
|
478
|
/*!40000 ALTER TABLE `place_path` ENABLE KEYS */;
|
|
479
|
|
|
480
|
--
|
|
481
|
-- Table structure for table `plot`
|
|
482
|
--
|
|
483
|
|
|
484
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
485
|
/*!40101 SET character_set_client = utf8 */;
|
|
486
|
CREATE TABLE `plot` (
|
|
487
|
`id` varbinary(767) NOT NULL,
|
|
488
|
`name` varbinary(767) DEFAULT NULL,
|
|
489
|
`area_m2` double DEFAULT NULL,
|
|
490
|
`bounding_box` varbinary(767) DEFAULT NULL,
|
|
491
|
PRIMARY KEY (`id`),
|
|
492
|
CONSTRAINT `fk_subplot_place1` FOREIGN KEY (`id`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
493
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
494
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
495
|
|
|
496
|
--
|
|
497
|
-- Dumping data for table `plot`
|
|
498
|
--
|
|
499
|
|
|
500
|
/*!40000 ALTER TABLE `plot` DISABLE KEYS */;
|
|
501
|
/*!40000 ALTER TABLE `plot` ENABLE KEYS */;
|
|
502
|
|
|
503
|
--
|
|
504
|
-- Table structure for table `project`
|
|
505
|
--
|
|
506
|
|
|
507
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
508
|
/*!40101 SET character_set_client = utf8 */;
|
|
509
|
CREATE TABLE `project` (
|
|
510
|
`id` varbinary(767) NOT NULL,
|
|
511
|
`name` varbinary(767) NOT NULL,
|
|
512
|
`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
513
|
PRIMARY KEY (`id`),
|
|
514
|
CONSTRAINT `fk_project_event1` FOREIGN KEY (`id`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
515
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A "project established to collect vegetation plot data. Each plot originates as part of a project." ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=project&entity=dba_tabledescription&where=where_tablename)';
|
|
516
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
517
|
|
|
518
|
--
|
|
519
|
-- Dumping data for table `project`
|
|
520
|
--
|
|
521
|
|
|
522
|
/*!40000 ALTER TABLE `project` DISABLE KEYS */;
|
|
523
|
/*!40000 ALTER TABLE `project` ENABLE KEYS */;
|
|
524
|
|
|
525
|
--
|
|
526
|
-- Table structure for table `record`
|
|
527
|
--
|
|
528
|
|
|
529
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
530
|
/*!40101 SET character_set_client = utf8 */;
|
|
531
|
CREATE TABLE `record` (
|
|
532
|
`id` varbinary(767) NOT NULL,
|
|
533
|
`source` varbinary(767) NOT NULL,
|
|
534
|
`source_id_scope` varbinary(767) DEFAULT NULL,
|
|
535
|
`source_record_id` varbinary(767) DEFAULT NULL,
|
|
536
|
`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
537
|
PRIMARY KEY (`id`),
|
|
538
|
UNIQUE KEY `record_unique` (`source`,`source_id_scope`,`source_record_id`),
|
|
539
|
KEY `fk_record_source1_idx` (`source`),
|
|
540
|
CONSTRAINT `fk_record_source1` FOREIGN KEY (`source`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
541
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
542
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
543
|
|
|
544
|
--
|
|
545
|
-- Dumping data for table `record`
|
|
546
|
--
|
|
547
|
|
|
548
|
/*!40000 ALTER TABLE `record` DISABLE KEYS */;
|
|
549
|
/*!40000 ALTER TABLE `record` ENABLE KEYS */;
|
|
550
|
|
|
551
|
--
|
|
552
|
-- Table structure for table `referenced_class`
|
|
553
|
--
|
|
554
|
|
|
555
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
556
|
/*!40101 SET character_set_client = utf8 */;
|
|
557
|
CREATE TABLE `referenced_class` (
|
|
558
|
`id` varbinary(767) NOT NULL,
|
|
559
|
PRIMARY KEY (`id`),
|
|
560
|
CONSTRAINT `fk_example_record10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
561
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
562
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
563
|
|
|
564
|
--
|
|
565
|
-- Dumping data for table `referenced_class`
|
|
566
|
--
|
|
567
|
|
|
568
|
/*!40000 ALTER TABLE `referenced_class` DISABLE KEYS */;
|
|
569
|
/*!40000 ALTER TABLE `referenced_class` ENABLE KEYS */;
|
|
570
|
|
|
571
|
--
|
|
572
|
-- Table structure for table `relationship`
|
|
573
|
--
|
|
574
|
|
|
575
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
576
|
/*!40101 SET character_set_client = utf8 */;
|
|
577
|
CREATE TABLE `relationship` (
|
|
578
|
`id` varbinary(767) NOT NULL,
|
|
579
|
`record` varbinary(767) NOT NULL,
|
|
580
|
`related_record` varbinary(767) NOT NULL,
|
|
581
|
`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
582
|
PRIMARY KEY (`id`),
|
|
583
|
KEY `fk_relationship_record1_idx` (`record`),
|
|
584
|
KEY `fk_relationship_related_record_idx` (`related_record`),
|
|
585
|
CONSTRAINT `fk_relationship_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
586
|
CONSTRAINT `fk_relationship_record2` FOREIGN KEY (`record`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
587
|
CONSTRAINT `fk_relationship_related_record` FOREIGN KEY (`related_record`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
588
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"information pertaining to relationships between resources (instances of data records, such as Occurrences, Taxa, Locations, Events)" ("DwC":http://rs.tdwg.org/dwc/terms/#ResourceRelationship)';
|
|
589
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
590
|
|
|
591
|
--
|
|
592
|
-- Dumping data for table `relationship`
|
|
593
|
--
|
|
594
|
|
|
595
|
/*!40000 ALTER TABLE `relationship` DISABLE KEYS */;
|
|
596
|
/*!40000 ALTER TABLE `relationship` ENABLE KEYS */;
|
|
597
|
|
|
598
|
--
|
|
599
|
-- Table structure for table `soil_observation`
|
|
600
|
--
|
|
601
|
|
|
602
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
603
|
/*!40101 SET character_set_client = utf8 */;
|
|
604
|
CREATE TABLE `soil_observation` (
|
|
605
|
`id` varbinary(767) NOT NULL,
|
|
606
|
`observations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
607
|
PRIMARY KEY (`id`),
|
|
608
|
CONSTRAINT `fk_soil_observation_place_observation1` FOREIGN KEY (`id`) REFERENCES `place_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
609
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A sampling of a [[VegCore#Location|Location]]''s soil';
|
|
610
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
611
|
|
|
612
|
--
|
|
613
|
-- Dumping data for table `soil_observation`
|
|
614
|
--
|
|
615
|
|
|
616
|
/*!40000 ALTER TABLE `soil_observation` DISABLE KEYS */;
|
|
617
|
/*!40000 ALTER TABLE `soil_observation` ENABLE KEYS */;
|
|
618
|
|
|
619
|
--
|
|
620
|
-- Table structure for table `source`
|
|
621
|
--
|
|
622
|
|
|
623
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
624
|
/*!40101 SET character_set_client = utf8 */;
|
|
625
|
CREATE TABLE `source` (
|
|
626
|
`id` varbinary(767) NOT NULL,
|
|
627
|
`parent` varbinary(767) NOT NULL,
|
|
628
|
`name` varbinary(767) NOT NULL,
|
|
629
|
`first_publisher` varbinary(767) DEFAULT NULL,
|
|
630
|
`owner` varbinary(767) DEFAULT NULL,
|
|
631
|
`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
632
|
PRIMARY KEY (`id`),
|
|
633
|
UNIQUE KEY `source_unique` (`parent`,`name`),
|
|
634
|
KEY `fk_source1_idx` (`parent`),
|
|
635
|
KEY `fk_source_party1_idx` (`owner`),
|
|
636
|
KEY `fk_source_party2_idx` (`first_publisher`),
|
|
637
|
CONSTRAINT `fk_source1` FOREIGN KEY (`parent`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
638
|
CONSTRAINT `fk_source_party1` FOREIGN KEY (`owner`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
639
|
CONSTRAINT `fk_source_party2` FOREIGN KEY (`first_publisher`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
640
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='a "reference [...] cited within the database" ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=reference&entity=dba_tabledescription&where=where_tablename)';
|
|
641
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
642
|
|
|
643
|
--
|
|
644
|
-- Dumping data for table `source`
|
|
645
|
--
|
|
646
|
|
|
647
|
/*!40000 ALTER TABLE `source` DISABLE KEYS */;
|
|
648
|
/*!40000 ALTER TABLE `source` ENABLE KEYS */;
|
|
649
|
|
|
650
|
--
|
|
651
|
-- Table structure for table `specimen`
|
|
652
|
--
|
|
653
|
|
|
654
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
655
|
/*!40101 SET character_set_client = utf8 */;
|
|
656
|
CREATE TABLE `specimen` (
|
|
657
|
`id` varbinary(767) NOT NULL,
|
|
658
|
`individual` varbinary(767) DEFAULT NULL,
|
|
659
|
`code_in_individual` varbinary(767) DEFAULT NULL,
|
|
660
|
`collection_event` varbinary(767) DEFAULT NULL,
|
|
661
|
`orig_collection` varbinary(767) DEFAULT NULL,
|
|
662
|
`barcode` varbinary(767) DEFAULT NULL,
|
|
663
|
`accession_number` varbinary(767) DEFAULT NULL,
|
|
664
|
`current_collection` varbinary(767) DEFAULT NULL,
|
|
665
|
`owner_collection` varbinary(767) DEFAULT NULL,
|
|
666
|
PRIMARY KEY (`id`),
|
|
667
|
UNIQUE KEY `specimen_unique_in_individual` (`individual`,`code_in_individual`),
|
|
668
|
UNIQUE KEY `specimen_unique_by_collection_event` (`collection_event`),
|
|
669
|
UNIQUE KEY `specimen_unique_in_collection_by_barcode` (`orig_collection`,`barcode`),
|
|
670
|
UNIQUE KEY `specimen_unique_in_collection_by_accession_number` (`orig_collection`,`accession_number`),
|
|
671
|
KEY `fk_specimen_collection1_idx` (`orig_collection`),
|
|
672
|
KEY `fk_specimen_taxon_observation1_idx` (`collection_event`),
|
|
673
|
KEY `fk_specimen_individual1_idx` (`individual`),
|
|
674
|
KEY `fk_specimen_collection2_idx` (`current_collection`),
|
|
675
|
KEY `fk_specimen_organization3_idx` (`owner_collection`),
|
|
676
|
CONSTRAINT `fk_specimen_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `taxon_occurrence` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
677
|
CONSTRAINT `fk_specimen_collection1` FOREIGN KEY (`orig_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
678
|
CONSTRAINT `fk_specimen_organization3` FOREIGN KEY (`owner_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
679
|
CONSTRAINT `fk_specimen_taxon_observation1` FOREIGN KEY (`collection_event`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
680
|
CONSTRAINT `fk_specimen_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
681
|
CONSTRAINT `fk_specimen_collection2` FOREIGN KEY (`current_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
682
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A "part of a plant" ("Wikipedia":http://en.wikipedia.org/wiki/Specimen) which was collected from it';
|
|
683
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
684
|
|
|
685
|
--
|
|
686
|
-- Dumping data for table `specimen`
|
|
687
|
--
|
|
688
|
|
|
689
|
/*!40000 ALTER TABLE `specimen` DISABLE KEYS */;
|
|
690
|
/*!40000 ALTER TABLE `specimen` ENABLE KEYS */;
|
|
691
|
|
|
692
|
--
|
|
693
|
-- Table structure for table `specimen_observation`
|
|
694
|
--
|
|
695
|
|
|
696
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
697
|
/*!40101 SET character_set_client = utf8 */;
|
|
698
|
CREATE TABLE `specimen_observation` (
|
|
699
|
`id` varbinary(767) NOT NULL,
|
|
700
|
`specimen` varbinary(767) NOT NULL,
|
|
701
|
`traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
702
|
PRIMARY KEY (`id`),
|
|
703
|
KEY `fk_specimen_observation_specimen1_idx` (`specimen`),
|
|
704
|
CONSTRAINT `fk_specimen_taxon_occurrence10` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
705
|
CONSTRAINT `fk_specimen_observation_specimen1` FOREIGN KEY (`specimen`) REFERENCES `specimen` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
706
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
707
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
708
|
|
|
709
|
--
|
|
710
|
-- Dumping data for table `specimen_observation`
|
|
711
|
--
|
|
712
|
|
|
713
|
/*!40000 ALTER TABLE `specimen_observation` DISABLE KEYS */;
|
|
714
|
/*!40000 ALTER TABLE `specimen_observation` ENABLE KEYS */;
|
|
715
|
|
|
716
|
--
|
|
717
|
-- Table structure for table `specimenholder_institution`
|
|
718
|
--
|
|
719
|
|
|
720
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
721
|
/*!40101 SET character_set_client = utf8 */;
|
|
722
|
CREATE TABLE `specimenholder_institution` (
|
|
723
|
`specimen` varbinary(767) NOT NULL,
|
|
724
|
`institution` varbinary(767) NOT NULL,
|
|
725
|
`sort_order` int(11) DEFAULT NULL,
|
|
726
|
PRIMARY KEY (`specimen`,`institution`),
|
|
727
|
KEY `fk_specimen_has_organization_organization1_idx` (`institution`),
|
|
728
|
KEY `fk_specimen_has_organization_specimen1_idx` (`specimen`),
|
|
729
|
CONSTRAINT `fk_specimen_has_organization_specimen1` FOREIGN KEY (`specimen`) REFERENCES `specimen` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
730
|
CONSTRAINT `fk_specimen_has_organization_organization1` FOREIGN KEY (`institution`) REFERENCES `organization` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
731
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
732
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
733
|
|
|
734
|
--
|
|
735
|
-- Dumping data for table `specimenholder_institution`
|
|
736
|
--
|
|
737
|
|
|
738
|
/*!40000 ALTER TABLE `specimenholder_institution` DISABLE KEYS */;
|
|
739
|
/*!40000 ALTER TABLE `specimenholder_institution` ENABLE KEYS */;
|
|
740
|
|
|
741
|
--
|
|
742
|
-- Table structure for table `stem`
|
|
743
|
--
|
|
744
|
|
|
745
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
746
|
/*!40101 SET character_set_client = utf8 */;
|
|
747
|
CREATE TABLE `stem` (
|
|
748
|
`id` varbinary(767) NOT NULL,
|
|
749
|
`individual` varbinary(767) NOT NULL,
|
|
750
|
PRIMARY KEY (`id`),
|
|
751
|
KEY `fk_stem_individual1_idx` (`individual`),
|
|
752
|
CONSTRAINT `fk_stem_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
753
|
CONSTRAINT `fk_stem_individual2` FOREIGN KEY (`id`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
754
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An "individual tree stem" ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=stemlocation&entity=dba_tabledescription&where=where_tablename)';
|
|
755
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
756
|
|
|
757
|
--
|
|
758
|
-- Dumping data for table `stem`
|
|
759
|
--
|
|
760
|
|
|
761
|
/*!40000 ALTER TABLE `stem` DISABLE KEYS */;
|
|
762
|
/*!40000 ALTER TABLE `stem` ENABLE KEYS */;
|
|
763
|
|
|
764
|
--
|
|
765
|
-- Table structure for table `stem_observation`
|
|
766
|
--
|
|
767
|
|
|
768
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
769
|
/*!40101 SET character_set_client = utf8 */;
|
|
770
|
CREATE TABLE `stem_observation` (
|
|
771
|
`id` varbinary(767) NOT NULL,
|
|
772
|
`individual_observation` varbinary(767) NOT NULL,
|
|
773
|
`stem` varbinary(767) DEFAULT NULL,
|
|
774
|
`traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
775
|
PRIMARY KEY (`id`),
|
|
776
|
UNIQUE KEY `stem_observation_unique` (`individual_observation`,`stem`),
|
|
777
|
KEY `fk_stem_observation_individual_observation1_idx` (`individual_observation`),
|
|
778
|
KEY `fk_stem_observation_stem1_idx` (`stem`),
|
|
779
|
CONSTRAINT `fk_stem_observation_individual_observation1` FOREIGN KEY (`individual_observation`) REFERENCES `individual_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
780
|
CONSTRAINT `fk_stem_observation_stem1` FOREIGN KEY (`stem`) REFERENCES `stem` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
781
|
CONSTRAINT `fk_stem_observation_individual_observation2` FOREIGN KEY (`id`) REFERENCES `individual_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
782
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of a [[VegCore#Stem|Stem]]';
|
|
783
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
784
|
|
|
785
|
--
|
|
786
|
-- Dumping data for table `stem_observation`
|
|
787
|
--
|
|
788
|
|
|
789
|
/*!40000 ALTER TABLE `stem_observation` DISABLE KEYS */;
|
|
790
|
/*!40000 ALTER TABLE `stem_observation` ENABLE KEYS */;
|
|
791
|
|
|
792
|
--
|
|
793
|
-- Table structure for table `stratum`
|
|
794
|
--
|
|
795
|
|
|
796
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
797
|
/*!40101 SET character_set_client = utf8 */;
|
|
798
|
CREATE TABLE `stratum` (
|
|
799
|
`id` varbinary(767) NOT NULL,
|
|
800
|
`name` varbinary(767) NOT NULL,
|
|
801
|
`info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
802
|
PRIMARY KEY (`id`),
|
|
803
|
CONSTRAINT `fk_place_path_record10` FOREIGN KEY (`id`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
804
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
805
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
806
|
|
|
807
|
--
|
|
808
|
-- Dumping data for table `stratum`
|
|
809
|
--
|
|
810
|
|
|
811
|
/*!40000 ALTER TABLE `stratum` DISABLE KEYS */;
|
|
812
|
/*!40000 ALTER TABLE `stratum` ENABLE KEYS */;
|
|
813
|
|
|
814
|
--
|
|
815
|
-- Table structure for table `subplot`
|
|
816
|
--
|
|
817
|
|
|
818
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
819
|
/*!40101 SET character_set_client = utf8 */;
|
|
820
|
CREATE TABLE `subplot` (
|
|
821
|
`id` varbinary(767) NOT NULL,
|
|
822
|
`x_m` double DEFAULT NULL,
|
|
823
|
`y_m` double DEFAULT NULL,
|
|
824
|
PRIMARY KEY (`id`),
|
|
825
|
CONSTRAINT `fk_subplot_plot1` FOREIGN KEY (`id`) REFERENCES `plot` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
826
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"subplot, line, or any other subsample or subdivision of plot" ("SALVIAS":http://salvias.net/Documents/salvias_data_dictionary.html#Plot_data/subplot)';
|
|
827
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
828
|
|
|
829
|
--
|
|
830
|
-- Dumping data for table `subplot`
|
|
831
|
--
|
|
832
|
|
|
833
|
/*!40000 ALTER TABLE `subplot` DISABLE KEYS */;
|
|
834
|
/*!40000 ALTER TABLE `subplot` ENABLE KEYS */;
|
|
835
|
|
|
836
|
--
|
|
837
|
-- Table structure for table `taxon_assertion`
|
|
838
|
--
|
|
839
|
|
|
840
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
841
|
/*!40101 SET character_set_client = utf8 */;
|
|
842
|
CREATE TABLE `taxon_assertion` (
|
|
843
|
`id` varbinary(767) NOT NULL,
|
|
844
|
`string` varbinary(767) NOT NULL COMMENT 'for parsed_taxon_assertion, this is the TNRS input name, not the concatenated matched name',
|
|
845
|
`taxon` varbinary(767) DEFAULT NULL,
|
|
846
|
`cf_aff` varbinary(767) DEFAULT NULL,
|
|
847
|
`annotations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
848
|
PRIMARY KEY (`id`),
|
|
849
|
KEY `fk_taxon_assertion_taxon_string1_idx` (`string`),
|
|
850
|
KEY `fk_taxon_assertion_taxon_name1_idx` (`taxon`),
|
|
851
|
CONSTRAINT `fk_qualified_taxon_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
852
|
CONSTRAINT `fk_taxon_assertion_taxon_string1` FOREIGN KEY (`string`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
853
|
CONSTRAINT `fk_taxon_assertion_taxon_name1` FOREIGN KEY (`taxon`) REFERENCES `taxon_name` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
854
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
855
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
856
|
|
|
857
|
--
|
|
858
|
-- Dumping data for table `taxon_assertion`
|
|
859
|
--
|
|
860
|
|
|
861
|
/*!40000 ALTER TABLE `taxon_assertion` DISABLE KEYS */;
|
|
862
|
/*!40000 ALTER TABLE `taxon_assertion` ENABLE KEYS */;
|
|
863
|
|
|
864
|
--
|
|
865
|
-- Table structure for table `taxon_concept`
|
|
866
|
--
|
|
867
|
|
|
868
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
869
|
/*!40101 SET character_set_client = utf8 */;
|
|
870
|
CREATE TABLE `taxon_concept` (
|
|
871
|
`id` varbinary(767) NOT NULL,
|
|
872
|
`according_to` varbinary(767) NOT NULL,
|
|
873
|
`parent` varbinary(767) NOT NULL,
|
|
874
|
`accepted_taxon_concept` varbinary(767) DEFAULT NULL,
|
|
875
|
PRIMARY KEY (`id`),
|
|
876
|
UNIQUE KEY `taxon_concept_unique_name` (`according_to`),
|
|
877
|
KEY `fk_taxon_taxon1_idx` (`parent`),
|
|
878
|
KEY `fk_taxon_concept_source1_idx` (`according_to`),
|
|
879
|
KEY `fk_taxon_concept_taxon_concept1_idx` (`accepted_taxon_concept`),
|
|
880
|
CONSTRAINT `fk_taxon_taxon1` FOREIGN KEY (`parent`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
881
|
CONSTRAINT `fk_taxon_concept_source1` FOREIGN KEY (`according_to`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
882
|
CONSTRAINT `fk_taxon_concept_taxon_concept1` FOREIGN KEY (`accepted_taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
883
|
CONSTRAINT `fk_taxon_concept_taxon_name1` FOREIGN KEY (`id`) REFERENCES `taxon_name` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
884
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A [[VegCore#Taxon|Taxon]] described by a specific [[VegCore#Reference|Reference]]';
|
|
885
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
886
|
|
|
887
|
--
|
|
888
|
-- Dumping data for table `taxon_concept`
|
|
889
|
--
|
|
890
|
|
|
891
|
/*!40000 ALTER TABLE `taxon_concept` DISABLE KEYS */;
|
|
892
|
/*!40000 ALTER TABLE `taxon_concept` ENABLE KEYS */;
|
|
893
|
|
|
894
|
--
|
|
895
|
-- Table structure for table `taxon_determination`
|
|
896
|
--
|
|
897
|
|
|
898
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
899
|
/*!40101 SET character_set_client = utf8 */;
|
|
900
|
CREATE TABLE `taxon_determination` (
|
|
901
|
`id` varbinary(767) NOT NULL,
|
|
902
|
`taxon_assertion` varbinary(767) NOT NULL,
|
|
903
|
`identified_by` varbinary(767) DEFAULT NULL,
|
|
904
|
`fit_info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
905
|
PRIMARY KEY (`id`),
|
|
906
|
UNIQUE KEY `taxon_determination_unique` (`taxon_assertion`,`identified_by`),
|
|
907
|
KEY `fk_taxon_occurrence_has_qualified_taxon1_idx` (`taxon_assertion`),
|
|
908
|
KEY `fk_taxon_determination_party1_idx` (`identified_by`),
|
|
909
|
CONSTRAINT `fk_taxon_occurrence_has_qualified_taxon1` FOREIGN KEY (`taxon_assertion`) REFERENCES `taxon_assertion` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
910
|
CONSTRAINT `fk_taxon_determination_record1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
911
|
CONSTRAINT `fk_taxon_determination_party1` FOREIGN KEY (`identified_by`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
912
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An assertion that a [[VegCore#TaxonOccurrence|TaxonOccurrence]] is a particular [[VegCore#Taxon|Taxon]]';
|
|
913
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
914
|
|
|
915
|
--
|
|
916
|
-- Dumping data for table `taxon_determination`
|
|
917
|
--
|
|
918
|
|
|
919
|
/*!40000 ALTER TABLE `taxon_determination` DISABLE KEYS */;
|
|
920
|
/*!40000 ALTER TABLE `taxon_determination` ENABLE KEYS */;
|
|
921
|
|
|
922
|
--
|
|
923
|
-- Table structure for table `taxon_name`
|
|
924
|
--
|
|
925
|
|
|
926
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
927
|
/*!40101 SET character_set_client = utf8 */;
|
|
928
|
CREATE TABLE `taxon_name` (
|
|
929
|
`id` varbinary(767) NOT NULL,
|
|
930
|
`unique_name` varbinary(767) NOT NULL,
|
|
931
|
`formal_name` varbinary(767) DEFAULT NULL,
|
|
932
|
`taxon_name` varbinary(767) DEFAULT NULL,
|
|
933
|
`author` varbinary(767) DEFAULT NULL,
|
|
934
|
`common_name` varbinary(767) DEFAULT NULL,
|
|
935
|
`rank` varbinary(767) DEFAULT NULL,
|
|
936
|
PRIMARY KEY (`id`),
|
|
937
|
KEY `fk_taxon_concept_taxon_string10_idx` (`unique_name`),
|
|
938
|
CONSTRAINT `fk_taxon_record10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
939
|
CONSTRAINT `fk_taxon_concept_taxon_string10` FOREIGN KEY (`unique_name`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
940
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
941
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
942
|
|
|
943
|
--
|
|
944
|
-- Dumping data for table `taxon_name`
|
|
945
|
--
|
|
946
|
|
|
947
|
/*!40000 ALTER TABLE `taxon_name` DISABLE KEYS */;
|
|
948
|
/*!40000 ALTER TABLE `taxon_name` ENABLE KEYS */;
|
|
949
|
|
|
950
|
--
|
|
951
|
-- Table structure for table `taxon_observation`
|
|
952
|
--
|
|
953
|
|
|
954
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
955
|
/*!40101 SET character_set_client = utf8 */;
|
|
956
|
CREATE TABLE `taxon_observation` (
|
|
957
|
`id` varbinary(767) NOT NULL,
|
|
958
|
`taxon_occurrence` varbinary(767) NOT NULL,
|
|
959
|
`collector` varbinary(767) DEFAULT NULL,
|
|
960
|
`collector_number` varbinary(767) DEFAULT NULL,
|
|
961
|
`voucher` varbinary(767) DEFAULT NULL,
|
|
962
|
`growth_form` varbinary(767) DEFAULT NULL,
|
|
963
|
`cultivated` tinyint(1) DEFAULT NULL,
|
|
964
|
`traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
965
|
PRIMARY KEY (`id`),
|
|
966
|
KEY `fk_taxon_observation_taxon_occurrence2_idx` (`taxon_occurrence`),
|
|
967
|
KEY `fk_taxon_observation_specimen1_idx` (`voucher`),
|
|
968
|
KEY `fk_taxon_observation_party1_idx` (`collector`),
|
|
969
|
CONSTRAINT `fk_taxon_observation_event1` FOREIGN KEY (`id`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
970
|
CONSTRAINT `fk_taxon_observation_taxon_occurrence2` FOREIGN KEY (`taxon_occurrence`) REFERENCES `taxon_occurrence` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
971
|
CONSTRAINT `fk_taxon_observation_specimen1` FOREIGN KEY (`voucher`) REFERENCES `specimen` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
972
|
CONSTRAINT `fk_taxon_observation_party1` FOREIGN KEY (`collector`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
973
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
974
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
975
|
|
|
976
|
--
|
|
977
|
-- Dumping data for table `taxon_observation`
|
|
978
|
--
|
|
979
|
|
|
980
|
/*!40000 ALTER TABLE `taxon_observation` DISABLE KEYS */;
|
|
981
|
/*!40000 ALTER TABLE `taxon_observation` ENABLE KEYS */;
|
|
982
|
|
|
983
|
--
|
|
984
|
-- Table structure for table `taxon_occurrence`
|
|
985
|
--
|
|
986
|
|
|
987
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
988
|
/*!40101 SET character_set_client = utf8 */;
|
|
989
|
CREATE TABLE `taxon_occurrence` (
|
|
990
|
`id` varbinary(767) NOT NULL,
|
|
991
|
`current_determination` varbinary(767) DEFAULT NULL,
|
|
992
|
`original_determination` varbinary(767) DEFAULT NULL,
|
|
993
|
PRIMARY KEY (`id`),
|
|
994
|
KEY `fk_taxon_occurrence_taxon_determination1_idx` (`original_determination`),
|
|
995
|
KEY `fk_taxon_occurrence_taxon_determination2_idx` (`current_determination`),
|
|
996
|
CONSTRAINT `fk_taxon_occurrence_taxon_determination1` FOREIGN KEY (`original_determination`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
997
|
CONSTRAINT `fk_taxon_occurrence_taxon_determination2` FOREIGN KEY (`current_determination`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
998
|
CONSTRAINT `fk_taxon_occurrence_event1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
999
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='Any entity on which [[VegCore#TaxonDetermination|TaxonDetermination]]s can be made';
|
|
1000
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
1001
|
|
|
1002
|
--
|
|
1003
|
-- Dumping data for table `taxon_occurrence`
|
|
1004
|
--
|
|
1005
|
|
|
1006
|
/*!40000 ALTER TABLE `taxon_occurrence` DISABLE KEYS */;
|
|
1007
|
/*!40000 ALTER TABLE `taxon_occurrence` ENABLE KEYS */;
|
|
1008
|
|
|
1009
|
--
|
|
1010
|
-- Table structure for table `taxon_path`
|
|
1011
|
--
|
|
1012
|
|
|
1013
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
1014
|
/*!40101 SET character_set_client = utf8 */;
|
|
1015
|
CREATE TABLE `taxon_path` (
|
|
1016
|
`id` varbinary(767) NOT NULL,
|
|
1017
|
`family` varbinary(767) DEFAULT NULL,
|
|
1018
|
`genus` varbinary(767) DEFAULT NULL,
|
|
1019
|
`specific_epithet` varbinary(767) DEFAULT NULL,
|
|
1020
|
`ranks` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
1021
|
PRIMARY KEY (`id`),
|
|
1022
|
CONSTRAINT `fk_taxon_path_taxon_name1` FOREIGN KEY (`id`) REFERENCES `taxon_name` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
1023
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"a group of one (or more) populations of organism(s), which a taxonomist adjudges to be a unit" ("Wikipedia":http://en.wikipedia.org/wiki/Taxon)';
|
|
1024
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
1025
|
|
|
1026
|
--
|
|
1027
|
-- Dumping data for table `taxon_path`
|
|
1028
|
--
|
|
1029
|
|
|
1030
|
/*!40000 ALTER TABLE `taxon_path` DISABLE KEYS */;
|
|
1031
|
/*!40000 ALTER TABLE `taxon_path` ENABLE KEYS */;
|
|
1032
|
|
|
1033
|
--
|
|
1034
|
-- Table structure for table `taxon_presence`
|
|
1035
|
--
|
|
1036
|
|
|
1037
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
1038
|
/*!40101 SET character_set_client = utf8 */;
|
|
1039
|
CREATE TABLE `taxon_presence` (
|
|
1040
|
`id` varbinary(767) NOT NULL,
|
|
1041
|
`taxon_concept` varbinary(767) NOT NULL,
|
|
1042
|
`traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
|
|
1043
|
PRIMARY KEY (`id`),
|
|
1044
|
KEY `fk_taxon_presence_taxon_name1_idx` (`taxon_concept`),
|
|
1045
|
CONSTRAINT `fk_taxon_observation_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
1046
|
CONSTRAINT `fk_taxon_presence_taxon_name1` FOREIGN KEY (`taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
1047
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of just a [[VegCore#Taxon|Taxon]]''s _presence_';
|
|
1048
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
1049
|
|
|
1050
|
--
|
|
1051
|
-- Dumping data for table `taxon_presence`
|
|
1052
|
--
|
|
1053
|
|
|
1054
|
/*!40000 ALTER TABLE `taxon_presence` DISABLE KEYS */;
|
|
1055
|
/*!40000 ALTER TABLE `taxon_presence` ENABLE KEYS */;
|
|
1056
|
|
|
1057
|
--
|
|
1058
|
-- Table structure for table `taxon_string`
|
|
1059
|
--
|
|
1060
|
|
|
1061
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
1062
|
/*!40101 SET character_set_client = utf8 */;
|
|
1063
|
CREATE TABLE `taxon_string` (
|
|
1064
|
`string` varbinary(767) NOT NULL,
|
|
1065
|
PRIMARY KEY (`string`)
|
|
1066
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='to get the parsed_taxon_assertion (TNRS result) for a taxon_string, join using taxon_string.string<-taxon_assertion(string)::parsed_taxon_assertion[source=''TNRS.version''] (see wiki.vegpath.org/SQL_dotpaths)';
|
|
1067
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
1068
|
|
|
1069
|
--
|
|
1070
|
-- Dumping data for table `taxon_string`
|
|
1071
|
--
|
|
1072
|
|
|
1073
|
/*!40000 ALTER TABLE `taxon_string` DISABLE KEYS */;
|
|
1074
|
/*!40000 ALTER TABLE `taxon_string` ENABLE KEYS */;
|
|
1075
|
|
|
1076
|
--
|
|
1077
|
-- Table structure for table `validatable_place`
|
|
1078
|
--
|
|
1079
|
|
|
1080
|
/*!40101 SET @saved_cs_client = @@character_set_client */;
|
|
1081
|
/*!40101 SET character_set_client = utf8 */;
|
|
1082
|
CREATE TABLE `validatable_place` (
|
|
1083
|
`id` varbinary(767) NOT NULL,
|
|
1084
|
`coordinates` varbinary(767) NOT NULL,
|
|
1085
|
`path` varbinary(767) NOT NULL,
|
|
1086
|
PRIMARY KEY (`id`),
|
|
1087
|
UNIQUE KEY `validatable_place_unique` (`path`,`coordinates`),
|
|
1088
|
KEY `fk_geovalidation_place_path1_idx` (`path`),
|
|
1089
|
KEY `fk_geovalidation_coordinates1_idx` (`coordinates`),
|
|
1090
|
CONSTRAINT `fk_geovalidation_place_path1` FOREIGN KEY (`path`) REFERENCES `place_path` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
|
|
1091
|
CONSTRAINT `fk_geovalidation_coordinates1` FOREIGN KEY (`coordinates`) REFERENCES `coordinates` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
|
|
1092
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
|
1093
|
/*!40101 SET character_set_client = @saved_cs_client */;
|
|
1094
|
|
|
1095
|
--
|
|
1096
|
-- Dumping data for table `validatable_place`
|
|
1097
|
--
|
|
1098
|
|
|
1099
|
/*!40000 ALTER TABLE `validatable_place` DISABLE KEYS */;
|
|
1100
|
/*!40000 ALTER TABLE `validatable_place` ENABLE KEYS */;
|
|
1101
|
/*!40103 SET TIME_ZONE=@OLD_TIME_ZONE */;
|
|
1102
|
|
|
1103
|
/*!40101 SET SQL_MODE=@OLD_SQL_MODE */;
|
|
1104
|
/*!40014 SET FOREIGN_KEY_CHECKS=@OLD_FOREIGN_KEY_CHECKS */;
|
|
1105
|
/*!40014 SET UNIQUE_CHECKS=@OLD_UNIQUE_CHECKS */;
|
|
1106
|
/*!40101 SET CHARACTER_SET_CLIENT=@OLD_CHARACTER_SET_CLIENT */;
|
|
1107
|
/*!40101 SET CHARACTER_SET_RESULTS=@OLD_CHARACTER_SET_RESULTS */;
|
|
1108
|
/*!40101 SET COLLATION_CONNECTION=@OLD_COLLATION_CONNECTION */;
|
|
1109
|
/*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;
|
|
1110
|
|
|
1111
|
-- Dump completed
|
