<isoriginal>true</isoriginal>

                    <iscurrent>true</iscurrent>

                </taxondetermination>

            </taxonoccurrence>

        </taxonoccurrence_id>

        <reference_id><reference/></reference_id>

        <collectionnumber>9877</collectionnumber>

        <description>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</description>

        <sourceaccessioncode>816590</sourceaccessioncode>

        <museum_id><party><organizationname>NY Herbarium</organizationname></party></museum_id>

        <collectioncode_dwc>Herbarium</collectioncode_dwc>

    </specimenreplicate>

                    <isoriginal>true</isoriginal>

                    <iscurrent>true</iscurrent>

                </taxondetermination>

            </taxonoccurrence>

        </taxonoccurrence_id>

        <reference_id><reference/></reference_id>

        <catalognumber_dwc>200996</catalognumber_dwc>

        <collectionnumber>545</collectionnumber>

        <sourceaccessioncode>220541</sourceaccessioncode>

        <museum_id><party><organizationname>NY Herbarium</organizationname></party></museum_id>

        <collectioncode_dwc>Herbarium</collectioncode_dwc>

    </specimenreplicate>

Species,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,149

Phylum,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,143

Subspecies,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,150

CatalogNumber,:[*_id/reference]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20

CollectorNumber,:[*_id/reference]/collectionnumber/_alt/1,,22

FieldNumber,:[*_id/reference]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53

Notes,:[*_id/reference]/description/_merge/1,,

PlantFungusDescription,":[*_id/reference]/description/_merge/2/_label[label=""plant fungus""]/value",,

UniqueNYInternalRecordNumber,:[*_id/reference]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19

InstitutionCode,:[*_id/reference]/{museum_id/party/organizationname/_name/first},,11

CollectionCode,":[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12

BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15

DetType,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=voucherType]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."

coll_number,/specimenreplicate:[*_id/reference/shortname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,Brad: Incorrect. Map instead as for voucher_string

census_date,/specimenreplicate:[*_id/reference/shortname/_alt/2=$/_ignore/inLabel]/collectiondate/_*/date,

auth,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.

Family,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

Genus,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

OrigGenus,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Binomial]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_name/first",

OrigSpecies,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Binomial]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_name/last",Brad: OMIT

OrigFamily,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",Brad: OMIT

GenAuth,,

IsMorpho,,

Line,,

                    <isoriginal>true</isoriginal>

                    <iscurrent>true</iscurrent>

                </taxondetermination>

            </taxonoccurrence>

        </taxonoccurrence_id>

        <reference_id><reference/></reference_id>

        <collectionnumber>9877</collectionnumber>

        <description>plant fungus: with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</description>

        <sourceaccessioncode>816590</sourceaccessioncode>

        <museum_id><party><organizationname>NY Herbarium</organizationname></party></museum_id>

        <collectioncode_dwc>Herbarium</collectioncode_dwc>

    </specimenreplicate>

                    <isoriginal>true</isoriginal>

                    <iscurrent>true</iscurrent>

                </taxondetermination>

            </taxonoccurrence>

        </taxonoccurrence_id>

        <reference_id><reference/></reference_id>

        <catalognumber_dwc>200996</catalognumber_dwc>

        <collectionnumber>545</collectionnumber>

        <sourceaccessioncode>220541</sourceaccessioncode>

        <museum_id><party><organizationname>NY Herbarium</organizationname></party></museum_id>

        <collectioncode_dwc>Herbarium</collectioncode_dwc>

    </specimenreplicate>

Species,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,149

Phylum,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,143

Subspecies,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,150

CatalogNumber,:[*_id/reference]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20

CollectorNumber,:[*_id/reference]/collectionnumber/_alt/1,,22

FieldNumber,:[*_id/reference]/collectionnumber/_alt/3,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53

Notes,:[*_id/reference]/description/_merge/1,,

PlantFungusDescription,":[*_id/reference]/description/_merge/2/_label[label=""plant fungus""]/value",,

UniqueNYInternalRecordNumber,:[*_id/reference]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19

InstitutionCode,:[*_id/reference]/{museum_id/party/organizationname/_name/first},,11

CollectionCode,":[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12

BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15

        <specimenreplicate>

            <reference_id><reference><shortname>SALVIAS</shortname></reference></reference_id>

            <catalognumber_dwc>14598</catalognumber_dwc>

        </specimenreplicate>

        <taxondetermination>

            <role_id><role><rolecode>computer</rolecode></role></role_id>

            <isoriginal>true</isoriginal>

            <iscurrent>true</iscurrent>

        </taxondetermination>

    </taxonoccurrence>

    <taxonoccurrence id="1">

        <locationevent_id>

        <specimenreplicate>

            <reference_id><reference><shortname>SALVIAS</shortname></reference></reference_id>

            <catalognumber_dwc>14669</catalognumber_dwc>

        </specimenreplicate>

        <taxondetermination>

            <role_id><role><rolecode>computer</rolecode></role></role_id>

            <isoriginal>true</isoriginal>

            <iscurrent>true</iscurrent>

        </taxondetermination>

    </taxonoccurrence>

</VegBIEN>

individual_code,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=individualCode]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."

det_type,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=voucherType]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."

coll_number,/specimenreplicate:[*_id/reference/shortname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,Brad: Incorrect. Map instead as for voucher_string

specific_authority,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.

family,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

genus,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

cf_aff,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Binomial]/{taxonFit,*_id/plantconcept/*_id/*/plantname/_name/middle}","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."

orig_species,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Binomial]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_name/last",Brad: OMIT

orig_family,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",Brad: OMIT

collector_code,,Brad: OMIT

comments,,Brad: OMIT

fam_status,,Brad: OMIT. This will be determined later by using TNRS.

    sourceaccessioncode text,

    accessioncode text,

    taxonoccurrence_id int(11) NOT NULL,

    collectionnumber text,

    specimen_id int(11),

    description text

CREATE TABLE taxonoccurrence (

    taxonoccurrence_id int(11) NOT NULL,

    locationevent_id int(11),

    emb_taxonoccurrence int(11),

);

--

-- Name: telephone_party_id_x; Type: INDEX; Schema: public; Owner: -; Tablespace: 

--

--

-- Name: telephone_party_id; Type: FK CONSTRAINT; Schema: public; Owner: -

--

    sourceaccessioncode text,

    accessioncode text,

    taxonoccurrence_id integer NOT NULL,

    collectionnumber text,

    specimen_id integer,

    description text

CREATE TABLE taxonoccurrence (

    taxonoccurrence_id integer NOT NULL,

    locationevent_id integer,

    emb_taxonoccurrence integer,

);

--

-- Name: telephone_party_id_x; Type: INDEX; Schema: public; Owner: -; Tablespace: 

--

--

-- Name: telephone_party_id; Type: FK CONSTRAINT; Schema: public; Owner: -

--

/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept:[partyWithRole/*ID->/parties/party/organizationName=$/_ignore/inLabel]/authorCode,/specimenreplicate:[*_id/reference/shortname/_alt/2=$/_ignore/inLabel]/catalognumber_dwc,

/simpleUserdefined[name=collectionDate]/value,/specimenreplicate:[*_id/reference/shortname/_alt/2=$/_ignore/inLabel]/collectiondate,

/simpleUserdefined[name=collectionDate]/value/_*/date,/specimenreplicate:[*_id/reference/shortname/_alt/2=$/_ignore/inLabel]/collectiondate/_*/date,

"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=auth])/Name","/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ord])/Name","/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",

"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/*_id/plantconcept/*_id/*/plantname",

//taxonNameUsageConcept/authorCode,//specimenreplicate/catalognumber_dwc,

/simpleUserdefined[name=collectionDate]/value,//specimenreplicate/collectiondate,

/simpleUserdefined[name=collectionDate]/value/_*/date,//specimenreplicate/collectiondate/_*/date,

//*s/taxonConcept[@code=auth]/Name,"/taxondetermination[rolecode=computer,plantlevel=Authority]/*_id/plantconcept/*_id/*/plantname",

//*s/taxonConcept[@code=fam]/Name,"/taxondetermination[rolecode=computer,plantlevel=Family]/*_id/plantconcept/*_id/*/plantname",

//*s/taxonConcept[@code=gen]/Name,"/taxondetermination[rolecode=computer,plantlevel=Genus]/*_id/plantconcept/*_id/*/plantname",

//*s/taxonConcept[@code=ord]/Name,"/taxondetermination[rolecode=identifier,plantlevel=Order]/*_id/plantconcept/*_id/*/plantname",

//*s/taxonConcept[@code=phyl_div]/Name,"/taxondetermination[rolecode=identifier,plantlevel=Subkingdom]/*_id/plantconcept/*_id/*/plantname",

//*s/taxonConcept[@code=ssp]/Name,"/taxondetermination[rolecode=identifier,plantlevel=Subspecies]/*_id/plantconcept/*_id/*/plantname",

specificEpithet,"//taxonoccurrence/taxondetermination[rolecode=identifier,plantlevel=Species]/*_id/plantconcept/*_id/*/plantname",,149

phylum,"//taxonoccurrence/taxondetermination[rolecode=identifier,plantlevel=Subkingdom]/*_id/plantconcept/*_id/*/plantname",,143

infraspecificEpithet,"//taxonoccurrence/taxondetermination[rolecode=identifier,plantlevel=Subspecies]/*_id/plantconcept/*_id/*/plantname",,150

fieldNotes,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=notes]]/definedvalue","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes",54

catalogNumber,/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20

recordNumber,/collectionnumber/_alt/1,,22

bien.specimenDescription/_merge/1,/description/_merge/1,,

"bien.specimenDescription/_merge/2/_label[label=""plant fungus""]/value","/description/_merge/2/_label[label=""plant fungus""]/value",,

occurrenceID,/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19

institutionCode,/{museum_id/party/organizationname/_name/first},,11

collectionCode,"/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12

acceptedNameUsage,,,135

specificEpithet,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,149

phylum,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,143

infraspecificEpithet,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,150

fieldNotes,"/definedvalue[*_id/userdefined[tablename=specimenreplicate,userdefinedname=notes]]:[@fkey=tableRecord_ID]/definedvalue","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes",54

catalogNumber,:[*_id/reference]/catalognumber_dwc,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20

recordNumber,:[*_id/reference]/collectionnumber/_alt/1,,22

bien.specimenDescription/_merge/1,:[*_id/reference]/description/_merge/1,,

"bien.specimenDescription/_merge/2/_label[label=""plant fungus""]/value",":[*_id/reference]/description/_merge/2/_label[label=""plant fungus""]/value",,

occurrenceID,:[*_id/reference]/sourceaccessioncode,"Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19

institutionCode,:[*_id/reference]/{museum_id/party/organizationname/_name/first},,11

collectionCode,":[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12

acceptedNameUsage,,,135