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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"An observation applying to all occurrences of an organism based on an aggregation factor" ("VegX":http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/aggregateOrganismObservations/aggregateOrganismObservation)';
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-- Table structure for table `collection`
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CREATE TABLE `collection` (
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  CONSTRAINT `fk_collection_source1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"the collection within the institution where a specimen is held" ("Brad Boyle":https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/collectionCode)';
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-- Table structure for table `community`
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CREATE TABLE `community` (
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A community type is an abstract grouping of organisms that tend to co-occur on the landscape due to shared ecological requirements or preferences. May be designated by syntaxon or physiognomic types." ([[VegCore#VegX|VegX]])';
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-- Dumping data for table `community`
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/*!40000 ALTER TABLE `community` ENABLE KEYS */;
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/*!40101 SET character_set_client = utf8 */;
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-- Table structure for table `event`
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `event` (
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  CONSTRAINT `fk_event1` FOREIGN KEY (`parent`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_event_place1` FOREIGN KEY (`place`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"an action that occurs at a place and during a period of time" ("DwC":http://rs.tdwg.org/dwc/terms/#Event)';
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-- Dumping data for table `event`
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/*!40000 ALTER TABLE `event` ENABLE KEYS */;
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-- Table structure for table `geological_context`
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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CREATE TABLE `geological_context` (
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  CONSTRAINT `fk_geological_context_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"information pertaining to a location within a geological context, such as stratigraphy" ("DwC":http://rs.tdwg.org/dwc/terms/#GeologicalContext)';
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--
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-- Table structure for table `geopath`
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--
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CREATE TABLE `geopath` (
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A named region';
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--
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-- Dumping data for table `geopath`
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--
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--
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-- Table structure for table `geoplace`
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--
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CREATE TABLE `geoplace` (
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A numerically-defined point';
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--
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-- Dumping data for table `geoplace`
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--
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--
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-- Table structure for table `georeferencing`
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--
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `georeferencing` (
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  PRIMARY KEY (`id`),
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  KEY `fk_georeferencing_party_list1_idx` (`georeferenced_by`),
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  KEY `fk_georeferencing_geoplace1_idx` (`geoplace`),
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  CONSTRAINT `fk_georeferencing_party_list1` FOREIGN KEY (`georeferenced_by`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='also stored GNRS results';
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--
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--
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260
--
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `geovalidation` (
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  KEY `fk_geovalidation_geoplace2_idx` (`corrected_geoplace`),
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  CONSTRAINT `fk_geovalidation_geoplace1` FOREIGN KEY (`input_geoplace`) REFERENCES `scrubbed_geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
277
  CONSTRAINT `fk_geovalidation_geoplace2` FOREIGN KEY (`corrected_geoplace`) REFERENCES `scrubbed_geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_geovalidation_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
279 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='The accuracy of the [[VegCore#Coordinates|Coordinates]], taking into account the [[VegCore#Placename|Placename]]';
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-- Table structure for table `individual`
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `individual` (
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  KEY `fk_individual_rel_place1_idx` (`plot_position`),
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  CONSTRAINT `fk_individual_record1` FOREIGN KEY (`id`) REFERENCES `reobservable` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_individual_rel_place1` FOREIGN KEY (`plot_position`) REFERENCES `rel_place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A distinct biological organism';
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306 8336 aaronmk
307 8928 aaronmk
--
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/*!40000 ALTER TABLE `individual` ENABLE KEYS */;
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315 10446 aaronmk
-- Table structure for table `individual_observation`
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--
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `individual_observation` (
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  `id` varbinary(767) NOT NULL,
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  `individual` varbinary(767) DEFAULT NULL,
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  `code` varbinary(767) DEFAULT NULL,
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  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  KEY `fk_individual_observation_individual1_idx` (`individual`),
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  CONSTRAINT `fk_individual_observation_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_individual_observation_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
329 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of an [[VegCore#Individual|Individual]]';
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/*!40101 SET character_set_client = @saved_cs_client */;
331 8336 aaronmk
332 8928 aaronmk
--
333 10446 aaronmk
-- Dumping data for table `individual_observation`
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/*!40000 ALTER TABLE `individual_observation` DISABLE KEYS */;
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/*!40000 ALTER TABLE `individual_observation` ENABLE KEYS */;
338 8336 aaronmk
339 8928 aaronmk
--
340 10446 aaronmk
-- Table structure for table `method`
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--
342 8336 aaronmk
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `method` (
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  `parent` varbinary(767) NOT NULL,
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  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  CONSTRAINT `fk_method_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_method_method1` FOREIGN KEY (`parent`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
353 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A specific method definition followed in the creation of the dataset. Each method links to a protocol and literature citation reference. A protocol may have many method or steps." ("VegX":http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/methods/method)';
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/*!40000 ALTER TABLE `method` ENABLE KEYS */;
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-- Table structure for table `organization`
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `organization` (
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  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  PRIMARY KEY (`id`),
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  CONSTRAINT `fk_organization_party1` FOREIGN KEY (`id`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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378 10446 aaronmk
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380 8581 aaronmk
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/*!40000 ALTER TABLE `organization` ENABLE KEYS */;
383 8632 aaronmk
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--
385 10446 aaronmk
-- Table structure for table `party`
386 8928 aaronmk
--
387 8336 aaronmk
388 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `party` (
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392 10452 aaronmk
  `organization` varbinary(767) DEFAULT NULL,
393 10446 aaronmk
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  PRIMARY KEY (`id`),
395 10452 aaronmk
  KEY `fk_party_organization1_idx` (`organization`),
396 10469 aaronmk
  CONSTRAINT `fk_party_organization1` FOREIGN KEY (`organization`) REFERENCES `organization` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_collection_source10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
398 10449 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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/*!40101 SET character_set_client = @saved_cs_client */;
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401 8928 aaronmk
--
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-- Dumping data for table `party`
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404 8336 aaronmk
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/*!40000 ALTER TABLE `party` DISABLE KEYS */;
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/*!40000 ALTER TABLE `party` ENABLE KEYS */;
407 8336 aaronmk
408 8928 aaronmk
--
409 10453 aaronmk
-- Table structure for table `party_list`
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--
411
412
/*!40101 SET @saved_cs_client     = @@character_set_client */;
413
/*!40101 SET character_set_client = utf8 */;
414
CREATE TABLE `party_list` (
415
  `id` varbinary(767) NOT NULL,
416
  `count` int(11) NOT NULL,
417
  PRIMARY KEY (`id`),
418
  CONSTRAINT `fk_collection_source100` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
419
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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/*!40101 SET character_set_client = @saved_cs_client */;
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422
--
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-- Dumping data for table `party_list`
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--
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/*!40000 ALTER TABLE `party_list` DISABLE KEYS */;
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/*!40000 ALTER TABLE `party_list` ENABLE KEYS */;
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429
--
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-- Table structure for table `party_list_entry`
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--
432
433
/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `party_list_entry` (
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  `id` varbinary(767) NOT NULL,
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  `entry` varbinary(767) NOT NULL,
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  `sort_order` int(11) DEFAULT NULL,
439
  PRIMARY KEY (`id`,`entry`),
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  KEY `fk_party_list_has_party_party1_idx` (`entry`),
441
  KEY `fk_party_list_has_party_party_list1_idx` (`id`),
442 10469 aaronmk
  CONSTRAINT `fk_party_list_has_party_party_list1` FOREIGN KEY (`id`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
443
  CONSTRAINT `fk_party_list_has_party_party1` FOREIGN KEY (`entry`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
444 10453 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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/*!40101 SET character_set_client = @saved_cs_client */;
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--
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-- Dumping data for table `party_list_entry`
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--
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/*!40000 ALTER TABLE `party_list_entry` DISABLE KEYS */;
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/*!40000 ALTER TABLE `party_list_entry` ENABLE KEYS */;
453
454
--
455 10495 aaronmk
-- Table structure for table `place`
456
--
457
458
/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
460
CREATE TABLE `place` (
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  `id` varbinary(767) NOT NULL,
462
  `parent` varbinary(767) DEFAULT NULL,
463
  `rank` varbinary(767) DEFAULT NULL,
464
  `name` varbinary(767) DEFAULT NULL,
465
  `geopath` varbinary(767) DEFAULT NULL,
466
  `locality` varbinary(767) DEFAULT NULL,
467
  `verbatim` set('hstore') COLLATE utf8_bin DEFAULT NULL COMMENT 'for verbatim coordinates, etc.',
468
  PRIMARY KEY (`id`),
469
  KEY `fk_place1_idx` (`parent`),
470
  KEY `fk_place_geopath1_idx` (`geopath`),
471
  CONSTRAINT `fk_place1` FOREIGN KEY (`parent`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
472
  CONSTRAINT `fk_place_geopath1` FOREIGN KEY (`geopath`) REFERENCES `geopath` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
473
  CONSTRAINT `fk_place_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
474
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A spatial region" ("DwC":http://rs.tdwg.org/dwc/terms/#dcterms:Location) or point';
475
/*!40101 SET character_set_client = @saved_cs_client */;
476
477
--
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-- Dumping data for table `place`
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--
480
481
/*!40000 ALTER TABLE `place` DISABLE KEYS */;
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/*!40000 ALTER TABLE `place` ENABLE KEYS */;
483
484
--
485 10446 aaronmk
-- Table structure for table `place_observation`
486 8928 aaronmk
--
487 8573 aaronmk
488 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
489
/*!40101 SET character_set_client = utf8 */;
490 10446 aaronmk
CREATE TABLE `place_observation` (
491
  `id` varbinary(767) NOT NULL,
492
  `place` varbinary(767) NOT NULL,
493
  `elevation_m` double DEFAULT NULL,
494
  `slope_incline_deg` double DEFAULT NULL,
495
  `slope_direction_deg_N` double DEFAULT NULL,
496
  `geological_context` varbinary(767) DEFAULT NULL,
497
  `community` varbinary(767) DEFAULT NULL,
498
  `observations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
499
  PRIMARY KEY (`id`),
500
  KEY `fk_place_observation_place1_idx` (`place`),
501
  KEY `fk_place_observation_geological_context1_idx` (`geological_context`),
502
  KEY `fk_place_observation_community1_idx` (`community`),
503 10495 aaronmk
  CONSTRAINT `fk_place_observation_place1` FOREIGN KEY (`place`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
504 10469 aaronmk
  CONSTRAINT `fk_place_observation_geological_context1` FOREIGN KEY (`geological_context`) REFERENCES `geological_context` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
505 10468 aaronmk
  CONSTRAINT `fk_place_observation_community1` FOREIGN KEY (`community`) REFERENCES `community` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
506 10460 aaronmk
  CONSTRAINT `fk_place_observation_sampling_event1` FOREIGN KEY (`id`) REFERENCES `sampling_event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
507 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A sampling of a [[VegCore#Location|Location]]';
508 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
509 8573 aaronmk
510 8928 aaronmk
--
511 10446 aaronmk
-- Dumping data for table `place_observation`
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--
513 8632 aaronmk
514 10446 aaronmk
/*!40000 ALTER TABLE `place_observation` DISABLE KEYS */;
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/*!40000 ALTER TABLE `place_observation` ENABLE KEYS */;
516 8336 aaronmk
517 8928 aaronmk
--
518 10446 aaronmk
-- Table structure for table `plot`
519 8928 aaronmk
--
520 8632 aaronmk
521 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
522
/*!40101 SET character_set_client = utf8 */;
523 10446 aaronmk
CREATE TABLE `plot` (
524
  `id` varbinary(767) NOT NULL,
525
  `name` varbinary(767) DEFAULT NULL,
526
  `area_m2` double DEFAULT NULL,
527 10463 aaronmk
  `shape` varbinary(767) DEFAULT NULL,
528 10499 aaronmk
  `length_m` varbinary(767) DEFAULT NULL,
529
  `width_m` varbinary(767) DEFAULT NULL,
530
  `azimuth_deg_N` varbinary(767) DEFAULT NULL,
531 10462 aaronmk
  `footprint_geom_WKT` varbinary(767) DEFAULT NULL,
532 10465 aaronmk
  `dimensions` set('hstore') COLLATE utf8_bin DEFAULT NULL,
533 10446 aaronmk
  PRIMARY KEY (`id`),
534 10495 aaronmk
  CONSTRAINT `fk_subplot_place1` FOREIGN KEY (`id`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
535 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
536 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
537 8336 aaronmk
538 8928 aaronmk
--
539 10446 aaronmk
-- Dumping data for table `plot`
540 8928 aaronmk
--
541 8336 aaronmk
542 10446 aaronmk
/*!40000 ALTER TABLE `plot` DISABLE KEYS */;
543
/*!40000 ALTER TABLE `plot` ENABLE KEYS */;
544 8632 aaronmk
545 8928 aaronmk
--
546 10446 aaronmk
-- Table structure for table `project`
547 8928 aaronmk
--
548 8336 aaronmk
549 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
550
/*!40101 SET character_set_client = utf8 */;
551 10446 aaronmk
CREATE TABLE `project` (
552
  `id` varbinary(767) NOT NULL,
553
  `name` varbinary(767) NOT NULL,
554
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
555
  PRIMARY KEY (`id`),
556
  CONSTRAINT `fk_project_event1` FOREIGN KEY (`id`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
557
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A "project established to collect vegetation plot data. Each plot originates as part of a project." ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=project&entity=dba_tabledescription&where=where_tablename)';
558 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
559 8336 aaronmk
560 8928 aaronmk
--
561 10446 aaronmk
-- Dumping data for table `project`
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--
563 8632 aaronmk
564 10446 aaronmk
/*!40000 ALTER TABLE `project` DISABLE KEYS */;
565
/*!40000 ALTER TABLE `project` ENABLE KEYS */;
566 8336 aaronmk
567 8928 aaronmk
--
568 10446 aaronmk
-- Table structure for table `record`
569 8928 aaronmk
--
570 8336 aaronmk
571 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
572
/*!40101 SET character_set_client = utf8 */;
573 10446 aaronmk
CREATE TABLE `record` (
574
  `id` varbinary(767) NOT NULL,
575
  `source` varbinary(767) NOT NULL,
576
  `source_id_scope` varbinary(767) DEFAULT NULL,
577
  `source_record_id` varbinary(767) DEFAULT NULL,
578
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
579
  PRIMARY KEY (`id`),
580
  UNIQUE KEY `record_unique` (`source`,`source_id_scope`,`source_record_id`),
581
  KEY `fk_record_source1_idx` (`source`),
582
  CONSTRAINT `fk_record_source1` FOREIGN KEY (`source`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
583
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
584 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
585 8632 aaronmk
586 8928 aaronmk
--
587 10446 aaronmk
-- Dumping data for table `record`
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--
589 8532 aaronmk
590 10446 aaronmk
/*!40000 ALTER TABLE `record` DISABLE KEYS */;
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/*!40000 ALTER TABLE `record` ENABLE KEYS */;
592 8532 aaronmk
593 8928 aaronmk
--
594 10446 aaronmk
-- Table structure for table `referenced_class`
595 8928 aaronmk
--
596 8632 aaronmk
597 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
598
/*!40101 SET character_set_client = utf8 */;
599 10446 aaronmk
CREATE TABLE `referenced_class` (
600
  `id` varbinary(767) NOT NULL,
601
  PRIMARY KEY (`id`),
602
  CONSTRAINT `fk_example_record10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
603
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
604 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
605 8565 aaronmk
606 8928 aaronmk
--
607 10446 aaronmk
-- Dumping data for table `referenced_class`
608 8928 aaronmk
--
609 8565 aaronmk
610 10446 aaronmk
/*!40000 ALTER TABLE `referenced_class` DISABLE KEYS */;
611
/*!40000 ALTER TABLE `referenced_class` ENABLE KEYS */;
612 8632 aaronmk
613 8928 aaronmk
--
614 10497 aaronmk
-- Table structure for table `rel_place`
615
--
616
617
/*!40101 SET @saved_cs_client     = @@character_set_client */;
618
/*!40101 SET character_set_client = utf8 */;
619
CREATE TABLE `rel_place` (
620
  `id` varbinary(767) NOT NULL,
621
  `x_m` double DEFAULT NULL,
622
  `y_m` double DEFAULT NULL,
623
  `coords` set('hstore') COLLATE utf8_bin DEFAULT NULL,
624
  PRIMARY KEY (`id`),
625
  CONSTRAINT `fk_subplot_place2` FOREIGN KEY (`id`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
626
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='stores plot elements such as subplots ("subplot, line, or any other subsample  or subdivision of plot" ("SALVIAS":http://salvias.net/Documents/salvias_data_dictionary.html#Plot_data/subplot))';
627
/*!40101 SET character_set_client = @saved_cs_client */;
628
629
--
630
-- Dumping data for table `rel_place`
631
--
632
633
/*!40000 ALTER TABLE `rel_place` DISABLE KEYS */;
634
/*!40000 ALTER TABLE `rel_place` ENABLE KEYS */;
635
636
--
637 10446 aaronmk
-- Table structure for table `relationship`
638 8928 aaronmk
--
639 8623 aaronmk
640 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
641
/*!40101 SET character_set_client = utf8 */;
642 10446 aaronmk
CREATE TABLE `relationship` (
643
  `id` varbinary(767) NOT NULL,
644
  `record` varbinary(767) NOT NULL,
645
  `related_record` varbinary(767) NOT NULL,
646
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
647
  PRIMARY KEY (`id`),
648
  KEY `fk_relationship_record1_idx` (`record`),
649
  KEY `fk_relationship_related_record_idx` (`related_record`),
650
  CONSTRAINT `fk_relationship_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
651
  CONSTRAINT `fk_relationship_record2` FOREIGN KEY (`record`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
652
  CONSTRAINT `fk_relationship_related_record` FOREIGN KEY (`related_record`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
653
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"information pertaining to relationships between resources (instances of data records, such as Occurrences, Taxa, Locations, Events)" ("DwC":http://rs.tdwg.org/dwc/terms/#ResourceRelationship)';
654 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
655 8623 aaronmk
656 8928 aaronmk
--
657 10446 aaronmk
-- Dumping data for table `relationship`
658 8928 aaronmk
--
659 8632 aaronmk
660 10446 aaronmk
/*!40000 ALTER TABLE `relationship` DISABLE KEYS */;
661
/*!40000 ALTER TABLE `relationship` ENABLE KEYS */;
662 8623 aaronmk
663 8928 aaronmk
--
664 10487 aaronmk
-- Table structure for table `reobservable`
665
--
666
667
/*!40101 SET @saved_cs_client     = @@character_set_client */;
668
/*!40101 SET character_set_client = utf8 */;
669
CREATE TABLE `reobservable` (
670
  `id` varbinary(767) NOT NULL,
671
  `current_determination` varbinary(767) DEFAULT NULL,
672
  `original_determination` varbinary(767) DEFAULT NULL,
673
  PRIMARY KEY (`id`),
674
  KEY `fk_taxon_occurrence_taxon_determination1_idx` (`original_determination`),
675
  KEY `fk_taxon_occurrence_taxon_determination2_idx` (`current_determination`),
676
  CONSTRAINT `fk_taxon_occurrence_taxon_determination1` FOREIGN KEY (`original_determination`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
677
  CONSTRAINT `fk_taxon_occurrence_taxon_determination2` FOREIGN KEY (`current_determination`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
678
  CONSTRAINT `fk_taxon_occurrence_event1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
679
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='Any entity on which [[VegCore#TaxonDetermination|TaxonDetermination]]s can be made';
680
/*!40101 SET character_set_client = @saved_cs_client */;
681
682
--
683
-- Dumping data for table `reobservable`
684
--
685
686
/*!40000 ALTER TABLE `reobservable` DISABLE KEYS */;
687
/*!40000 ALTER TABLE `reobservable` ENABLE KEYS */;
688
689
--
690 10460 aaronmk
-- Table structure for table `sampling_event`
691
--
692
693
/*!40101 SET @saved_cs_client     = @@character_set_client */;
694
/*!40101 SET character_set_client = utf8 */;
695
CREATE TABLE `sampling_event` (
696
  `id` varbinary(767) NOT NULL,
697
  `method` varbinary(767) DEFAULT NULL,
698
  PRIMARY KEY (`id`),
699
  KEY `fk_sampling_event_method1_idx` (`method`),
700 10469 aaronmk
  CONSTRAINT `fk_sampling_event_method1` FOREIGN KEY (`method`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
701
  CONSTRAINT `fk_project_event10` FOREIGN KEY (`id`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
702 10460 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
703
/*!40101 SET character_set_client = @saved_cs_client */;
704
705
--
706
-- Dumping data for table `sampling_event`
707
--
708
709
/*!40000 ALTER TABLE `sampling_event` DISABLE KEYS */;
710
/*!40000 ALTER TABLE `sampling_event` ENABLE KEYS */;
711
712
--
713 10495 aaronmk
-- Table structure for table `scrubbed_geoplace`
714
--
715
716
/*!40101 SET @saved_cs_client     = @@character_set_client */;
717
/*!40101 SET character_set_client = utf8 */;
718
CREATE TABLE `scrubbed_geoplace` (
719
  `id` varbinary(767) NOT NULL,
720
  `parent_geoplace` varbinary(767) NOT NULL,
721
  PRIMARY KEY (`id`),
722
  KEY `fk_geoplace_geoplace1_idx` (`parent_geoplace`),
723
  CONSTRAINT `fk_geoplace_geoplace1` FOREIGN KEY (`parent_geoplace`) REFERENCES `scrubbed_geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
724
  CONSTRAINT `fk_nested_geoplace_geoplace1` FOREIGN KEY (`id`) REFERENCES `geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
725
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='stores only scrubbed geoplaces (GADM places, and distinct point coordinates that GNRS says should be located within them)';
726
/*!40101 SET character_set_client = @saved_cs_client */;
727
728
--
729
-- Dumping data for table `scrubbed_geoplace`
730
--
731
732
/*!40000 ALTER TABLE `scrubbed_geoplace` DISABLE KEYS */;
733
/*!40000 ALTER TABLE `scrubbed_geoplace` ENABLE KEYS */;
734
735
--
736 10446 aaronmk
-- Table structure for table `soil_observation`
737 8928 aaronmk
--
738 8623 aaronmk
739 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
740
/*!40101 SET character_set_client = utf8 */;
741 10446 aaronmk
CREATE TABLE `soil_observation` (
742
  `id` varbinary(767) NOT NULL,
743
  `observations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
744
  PRIMARY KEY (`id`),
745
  CONSTRAINT `fk_soil_observation_place_observation1` FOREIGN KEY (`id`) REFERENCES `place_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
746
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A sampling of a [[VegCore#Location|Location]]''s soil';
747 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
748 8632 aaronmk
749 8928 aaronmk
--
750 10446 aaronmk
-- Dumping data for table `soil_observation`
751 8928 aaronmk
--
752 8623 aaronmk
753 10446 aaronmk
/*!40000 ALTER TABLE `soil_observation` DISABLE KEYS */;
754
/*!40000 ALTER TABLE `soil_observation` ENABLE KEYS */;
755 8623 aaronmk
756 8928 aaronmk
--
757 10446 aaronmk
-- Table structure for table `source`
758 8928 aaronmk
--
759 8632 aaronmk
760 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
761
/*!40101 SET character_set_client = utf8 */;
762 10446 aaronmk
CREATE TABLE `source` (
763
  `id` varbinary(767) NOT NULL,
764 10498 aaronmk
  `parent` varbinary(767) DEFAULT NULL,
765 10446 aaronmk
  `name` varbinary(767) NOT NULL,
766
  `first_publisher` varbinary(767) DEFAULT NULL,
767
  `owner` varbinary(767) DEFAULT NULL,
768
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
769
  PRIMARY KEY (`id`),
770
  UNIQUE KEY `source_unique` (`parent`,`name`),
771
  KEY `fk_source1_idx` (`parent`),
772
  KEY `fk_source_party1_idx` (`owner`),
773
  KEY `fk_source_party2_idx` (`first_publisher`),
774
  CONSTRAINT `fk_source1` FOREIGN KEY (`parent`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
775
  CONSTRAINT `fk_source_party1` FOREIGN KEY (`owner`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
776
  CONSTRAINT `fk_source_party2` FOREIGN KEY (`first_publisher`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
777
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='a "reference [...] cited within the database" ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=reference&entity=dba_tabledescription&where=where_tablename)';
778 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
779 8336 aaronmk
780 8928 aaronmk
--
781 10446 aaronmk
-- Dumping data for table `source`
782 8928 aaronmk
--
783 8336 aaronmk
784 10446 aaronmk
/*!40000 ALTER TABLE `source` DISABLE KEYS */;
785
/*!40000 ALTER TABLE `source` ENABLE KEYS */;
786 8632 aaronmk
787 8928 aaronmk
--
788 10446 aaronmk
-- Table structure for table `specimen`
789 8928 aaronmk
--
790 8336 aaronmk
791 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
792
/*!40101 SET character_set_client = utf8 */;
793 10446 aaronmk
CREATE TABLE `specimen` (
794
  `id` varbinary(767) NOT NULL,
795
  `individual` varbinary(767) DEFAULT NULL,
796
  `code_in_individual` varbinary(767) DEFAULT NULL,
797
  `collection_event` varbinary(767) DEFAULT NULL,
798
  `orig_collection` varbinary(767) DEFAULT NULL,
799
  `barcode` varbinary(767) DEFAULT NULL,
800
  `accession_number` varbinary(767) DEFAULT NULL,
801 10454 aaronmk
  `specimenholder_institutions` varbinary(767) DEFAULT NULL,
802 10446 aaronmk
  `current_collection` varbinary(767) DEFAULT NULL,
803
  `owner_collection` varbinary(767) DEFAULT NULL,
804
  PRIMARY KEY (`id`),
805
  UNIQUE KEY `specimen_unique_in_individual` (`individual`,`code_in_individual`),
806
  UNIQUE KEY `specimen_unique_by_collection_event` (`collection_event`),
807
  UNIQUE KEY `specimen_unique_in_collection_by_barcode` (`orig_collection`,`barcode`),
808
  UNIQUE KEY `specimen_unique_in_collection_by_accession_number` (`orig_collection`,`accession_number`),
809
  KEY `fk_specimen_collection1_idx` (`orig_collection`),
810
  KEY `fk_specimen_taxon_observation1_idx` (`collection_event`),
811
  KEY `fk_specimen_individual1_idx` (`individual`),
812
  KEY `fk_specimen_collection2_idx` (`current_collection`),
813
  KEY `fk_specimen_organization3_idx` (`owner_collection`),
814 10454 aaronmk
  KEY `fk_specimen_party_list1_idx` (`specimenholder_institutions`),
815 10493 aaronmk
  CONSTRAINT `fk_specimen_organization3` FOREIGN KEY (`owner_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
816
  CONSTRAINT `fk_specimen_taxon_observation1` FOREIGN KEY (`collection_event`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
817
  CONSTRAINT `fk_specimen_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
818 10487 aaronmk
  CONSTRAINT `fk_specimen_collection2` FOREIGN KEY (`current_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
819 10468 aaronmk
  CONSTRAINT `fk_specimen_party_list1` FOREIGN KEY (`specimenholder_institutions`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
820 10493 aaronmk
  CONSTRAINT `fk_specimen_collection1` FOREIGN KEY (`orig_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
821
  CONSTRAINT `fk_specimen_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `reobservable` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
822 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A "part of a plant" ("Wikipedia":http://en.wikipedia.org/wiki/Specimen) which was collected from it';
823 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
824 8521 aaronmk
825 8928 aaronmk
--
826 10446 aaronmk
-- Dumping data for table `specimen`
827 8928 aaronmk
--
828 8632 aaronmk
829 10446 aaronmk
/*!40000 ALTER TABLE `specimen` DISABLE KEYS */;
830
/*!40000 ALTER TABLE `specimen` ENABLE KEYS */;
831 8521 aaronmk
832 8928 aaronmk
--
833 10446 aaronmk
-- Table structure for table `specimen_observation`
834 8928 aaronmk
--
835 8521 aaronmk
836 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
837
/*!40101 SET character_set_client = utf8 */;
838 10446 aaronmk
CREATE TABLE `specimen_observation` (
839
  `id` varbinary(767) NOT NULL,
840
  `specimen` varbinary(767) NOT NULL,
841 10490 aaronmk
  `description` varbinary(767) DEFAULT NULL,
842 10446 aaronmk
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
843
  PRIMARY KEY (`id`),
844
  KEY `fk_specimen_observation_specimen1_idx` (`specimen`),
845 10469 aaronmk
  CONSTRAINT `fk_specimen_taxon_occurrence10` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
846
  CONSTRAINT `fk_specimen_observation_specimen1` FOREIGN KEY (`specimen`) REFERENCES `specimen` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
847 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
848 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
849 8632 aaronmk
850 8928 aaronmk
--
851 10446 aaronmk
-- Dumping data for table `specimen_observation`
852 8928 aaronmk
--
853 8521 aaronmk
854 10446 aaronmk
/*!40000 ALTER TABLE `specimen_observation` DISABLE KEYS */;
855
/*!40000 ALTER TABLE `specimen_observation` ENABLE KEYS */;
856 8521 aaronmk
857 8928 aaronmk
--
858 10446 aaronmk
-- Table structure for table `stem`
859 8928 aaronmk
--
860 8632 aaronmk
861 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
862
/*!40101 SET character_set_client = utf8 */;
863 10446 aaronmk
CREATE TABLE `stem` (
864
  `id` varbinary(767) NOT NULL,
865 10492 aaronmk
  `individual` varbinary(767) DEFAULT NULL,
866 10446 aaronmk
  PRIMARY KEY (`id`),
867
  KEY `fk_stem_individual1_idx` (`individual`),
868
  CONSTRAINT `fk_stem_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
869
  CONSTRAINT `fk_stem_individual2` FOREIGN KEY (`id`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
870
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An "individual tree stem" ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=stemlocation&entity=dba_tabledescription&where=where_tablename)';
871 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
872 8521 aaronmk
873 8928 aaronmk
--
874 10446 aaronmk
-- Dumping data for table `stem`
875 8928 aaronmk
--
876 8533 aaronmk
877 10446 aaronmk
/*!40000 ALTER TABLE `stem` DISABLE KEYS */;
878
/*!40000 ALTER TABLE `stem` ENABLE KEYS */;
879 8632 aaronmk
880 8928 aaronmk
--
881 10446 aaronmk
-- Table structure for table `stem_observation`
882 8928 aaronmk
--
883 8561 aaronmk
884 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
885
/*!40101 SET character_set_client = utf8 */;
886 10446 aaronmk
CREATE TABLE `stem_observation` (
887
  `id` varbinary(767) NOT NULL,
888 10492 aaronmk
  `individual_observation` varbinary(767) DEFAULT NULL,
889 10446 aaronmk
  `stem` varbinary(767) DEFAULT NULL,
890
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
891
  PRIMARY KEY (`id`),
892
  UNIQUE KEY `stem_observation_unique` (`individual_observation`,`stem`),
893
  KEY `fk_stem_observation_individual_observation1_idx` (`individual_observation`),
894
  KEY `fk_stem_observation_stem1_idx` (`stem`),
895 10469 aaronmk
  CONSTRAINT `fk_stem_observation_stem1` FOREIGN KEY (`stem`) REFERENCES `stem` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
896 10446 aaronmk
  CONSTRAINT `fk_stem_observation_individual_observation1` FOREIGN KEY (`individual_observation`) REFERENCES `individual_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
897 10469 aaronmk
  CONSTRAINT `fk_stem_observation_individual_observation2` FOREIGN KEY (`id`) REFERENCES `individual_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
898 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of a [[VegCore#Stem|Stem]]';
899 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
900 8567 aaronmk
901 8928 aaronmk
--
902 10446 aaronmk
-- Dumping data for table `stem_observation`
903 8928 aaronmk
--
904 8632 aaronmk
905 10446 aaronmk
/*!40000 ALTER TABLE `stem_observation` DISABLE KEYS */;
906
/*!40000 ALTER TABLE `stem_observation` ENABLE KEYS */;
907 8567 aaronmk
908 8928 aaronmk
--
909 10446 aaronmk
-- Table structure for table `stratum`
910 8928 aaronmk
--
911 8573 aaronmk
912 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
913
/*!40101 SET character_set_client = utf8 */;
914 10446 aaronmk
CREATE TABLE `stratum` (
915
  `id` varbinary(767) NOT NULL,
916
  `name` varbinary(767) NOT NULL,
917
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
918
  PRIMARY KEY (`id`),
919
  CONSTRAINT `fk_place_path_record10` FOREIGN KEY (`id`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
920
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
921 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
922 8632 aaronmk
923 8928 aaronmk
--
924 10446 aaronmk
-- Dumping data for table `stratum`
925 8928 aaronmk
--
926 8573 aaronmk
927 10446 aaronmk
/*!40000 ALTER TABLE `stratum` DISABLE KEYS */;
928
/*!40000 ALTER TABLE `stratum` ENABLE KEYS */;
929 8581 aaronmk
930 8928 aaronmk
--
931 10457 aaronmk
-- Table structure for table `taxon_absence`
932
--
933
934
/*!40101 SET @saved_cs_client     = @@character_set_client */;
935
/*!40101 SET character_set_client = utf8 */;
936
CREATE TABLE `taxon_absence` (
937
  `id` varbinary(767) NOT NULL,
938
  PRIMARY KEY (`id`),
939 10489 aaronmk
  CONSTRAINT `fk_taxon_absence_taxon_determination1` FOREIGN KEY (`id`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
940 10457 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation that a [[VegCore#Taxon|Taxon]]''s does _not_ exist in a place';
941
/*!40101 SET character_set_client = @saved_cs_client */;
942
943
--
944
-- Dumping data for table `taxon_absence`
945
--
946
947
/*!40000 ALTER TABLE `taxon_absence` DISABLE KEYS */;
948
/*!40000 ALTER TABLE `taxon_absence` ENABLE KEYS */;
949
950
--
951 10446 aaronmk
-- Table structure for table `taxon_assertion`
952 8928 aaronmk
--
953 8593 aaronmk
954 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
955
/*!40101 SET character_set_client = utf8 */;
956 10446 aaronmk
CREATE TABLE `taxon_assertion` (
957
  `id` varbinary(767) NOT NULL,
958
  `string` varbinary(767) NOT NULL COMMENT 'for parsed_taxon_assertion, this is the TNRS input name, not the concatenated matched name',
959
  `taxon` varbinary(767) DEFAULT NULL,
960
  `cf_aff` varbinary(767) DEFAULT NULL,
961
  `annotations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
962
  PRIMARY KEY (`id`),
963
  KEY `fk_taxon_assertion_taxon_string1_idx` (`string`),
964
  KEY `fk_taxon_assertion_taxon_name1_idx` (`taxon`),
965
  CONSTRAINT `fk_qualified_taxon_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
966 10469 aaronmk
  CONSTRAINT `fk_taxon_assertion_taxon_string1` FOREIGN KEY (`string`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE,
967
  CONSTRAINT `fk_taxon_assertion_taxon_name1` FOREIGN KEY (`taxon`) REFERENCES `taxon_name` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
968 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
969 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
970 8594 aaronmk
971 8928 aaronmk
--
972 10446 aaronmk
-- Dumping data for table `taxon_assertion`
973 8928 aaronmk
--
974 8594 aaronmk
975 10446 aaronmk
/*!40000 ALTER TABLE `taxon_assertion` DISABLE KEYS */;
976
/*!40000 ALTER TABLE `taxon_assertion` ENABLE KEYS */;
977 8928 aaronmk
978
--
979 10446 aaronmk
-- Table structure for table `taxon_concept`
980 8928 aaronmk
--
981
982 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
983
/*!40101 SET character_set_client = utf8 */;
984 10446 aaronmk
CREATE TABLE `taxon_concept` (
985
  `id` varbinary(767) NOT NULL,
986
  `according_to` varbinary(767) NOT NULL,
987 10498 aaronmk
  `parent` varbinary(767) DEFAULT NULL,
988 10446 aaronmk
  `accepted_taxon_concept` varbinary(767) DEFAULT NULL,
989
  PRIMARY KEY (`id`),
990
  UNIQUE KEY `taxon_concept_unique_name` (`according_to`),
991
  KEY `fk_taxon_taxon1_idx` (`parent`),
992
  KEY `fk_taxon_concept_source1_idx` (`according_to`),
993
  KEY `fk_taxon_concept_taxon_concept1_idx` (`accepted_taxon_concept`),
994 10469 aaronmk
  CONSTRAINT `fk_taxon_taxon1` FOREIGN KEY (`parent`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
995 10446 aaronmk
  CONSTRAINT `fk_taxon_concept_source1` FOREIGN KEY (`according_to`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
996
  CONSTRAINT `fk_taxon_concept_taxon_concept1` FOREIGN KEY (`accepted_taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
997 10469 aaronmk
  CONSTRAINT `fk_taxon_concept_taxon_name1` FOREIGN KEY (`id`) REFERENCES `taxon_name` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
998 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A [[VegCore#Taxon|Taxon]] described by a specific [[VegCore#Reference|Reference]]';
999 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1000 8928 aaronmk
1001
--
1002 10446 aaronmk
-- Dumping data for table `taxon_concept`
1003 8928 aaronmk
--
1004
1005 10446 aaronmk
/*!40000 ALTER TABLE `taxon_concept` DISABLE KEYS */;
1006
/*!40000 ALTER TABLE `taxon_concept` ENABLE KEYS */;
1007 8928 aaronmk
1008
--
1009 10446 aaronmk
-- Table structure for table `taxon_determination`
1010 8928 aaronmk
--
1011
1012 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1013
/*!40101 SET character_set_client = utf8 */;
1014 10446 aaronmk
CREATE TABLE `taxon_determination` (
1015
  `id` varbinary(767) NOT NULL,
1016 10473 aaronmk
  `identified_by` varbinary(767) DEFAULT NULL,
1017 10446 aaronmk
  `taxon_assertion` varbinary(767) NOT NULL,
1018
  `fit_info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1019
  PRIMARY KEY (`id`),
1020
  UNIQUE KEY `taxon_determination_unique` (`taxon_assertion`,`identified_by`),
1021
  KEY `fk_taxon_occurrence_has_qualified_taxon1_idx` (`taxon_assertion`),
1022 10455 aaronmk
  KEY `fk_taxon_determination_party_list1_idx` (`identified_by`),
1023 10493 aaronmk
  CONSTRAINT `fk_taxon_occurrence_has_qualified_taxon1` FOREIGN KEY (`taxon_assertion`) REFERENCES `taxon_assertion` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1024 10473 aaronmk
  CONSTRAINT `fk_taxon_determination_party_list1` FOREIGN KEY (`identified_by`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1025 10493 aaronmk
  CONSTRAINT `fk_taxon_determination_taxon_observation1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1026 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An assertion that a [[VegCore#TaxonOccurrence|TaxonOccurrence]] is a particular [[VegCore#Taxon|Taxon]]';
1027 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1028 8928 aaronmk
1029
--
1030 10446 aaronmk
-- Dumping data for table `taxon_determination`
1031 8928 aaronmk
--
1032
1033 10446 aaronmk
/*!40000 ALTER TABLE `taxon_determination` DISABLE KEYS */;
1034
/*!40000 ALTER TABLE `taxon_determination` ENABLE KEYS */;
1035 8928 aaronmk
1036
--
1037 10446 aaronmk
-- Table structure for table `taxon_name`
1038 8928 aaronmk
--
1039
1040 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1041
/*!40101 SET character_set_client = utf8 */;
1042 10446 aaronmk
CREATE TABLE `taxon_name` (
1043
  `id` varbinary(767) NOT NULL,
1044
  `unique_name` varbinary(767) NOT NULL,
1045
  `formal_name` varbinary(767) DEFAULT NULL,
1046
  `taxon_name` varbinary(767) DEFAULT NULL,
1047
  `author` varbinary(767) DEFAULT NULL,
1048
  `common_name` varbinary(767) DEFAULT NULL,
1049
  `rank` varbinary(767) DEFAULT NULL,
1050 10496 aaronmk
  `taxon_path` varbinary(767) DEFAULT NULL,
1051 10446 aaronmk
  PRIMARY KEY (`id`),
1052
  KEY `fk_taxon_concept_taxon_string10_idx` (`unique_name`),
1053 10496 aaronmk
  KEY `fk_taxon_name_taxon_path1_idx` (`taxon_path`),
1054 10469 aaronmk
  CONSTRAINT `fk_taxon_record10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1055 10496 aaronmk
  CONSTRAINT `fk_taxon_concept_taxon_string10` FOREIGN KEY (`unique_name`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE,
1056
  CONSTRAINT `fk_taxon_name_taxon_path1` FOREIGN KEY (`taxon_path`) REFERENCES `taxon_path` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1057 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
1058 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1059 8928 aaronmk
1060
--
1061 10446 aaronmk
-- Dumping data for table `taxon_name`
1062 8928 aaronmk
--
1063
1064 10446 aaronmk
/*!40000 ALTER TABLE `taxon_name` DISABLE KEYS */;
1065
/*!40000 ALTER TABLE `taxon_name` ENABLE KEYS */;
1066 8928 aaronmk
1067
--
1068 10446 aaronmk
-- Table structure for table `taxon_observation`
1069 8928 aaronmk
--
1070
1071 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1072
/*!40101 SET character_set_client = utf8 */;
1073 10446 aaronmk
CREATE TABLE `taxon_observation` (
1074
  `id` varbinary(767) NOT NULL,
1075 10455 aaronmk
  `collectors` varbinary(767) DEFAULT NULL,
1076 10446 aaronmk
  `collector_number` varbinary(767) DEFAULT NULL,
1077
  `voucher` varbinary(767) DEFAULT NULL,
1078
  `growth_form` varbinary(767) DEFAULT NULL,
1079
  `cultivated` tinyint(1) DEFAULT NULL,
1080
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1081
  PRIMARY KEY (`id`),
1082
  KEY `fk_taxon_observation_specimen1_idx` (`voucher`),
1083 10455 aaronmk
  KEY `fk_taxon_observation_party_list1_idx` (`collectors`),
1084 10457 aaronmk
  CONSTRAINT `fk_taxon_observation_party_list1` FOREIGN KEY (`collectors`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1085 10460 aaronmk
  CONSTRAINT `fk_taxon_observation_sampling_event1` FOREIGN KEY (`id`) REFERENCES `sampling_event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1086 10487 aaronmk
  CONSTRAINT `fk_taxon_observation_specimen1` FOREIGN KEY (`voucher`) REFERENCES `specimen` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1087 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
1088 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1089 8928 aaronmk
1090
--
1091 10446 aaronmk
-- Dumping data for table `taxon_observation`
1092 8928 aaronmk
--
1093
1094 10446 aaronmk
/*!40000 ALTER TABLE `taxon_observation` DISABLE KEYS */;
1095
/*!40000 ALTER TABLE `taxon_observation` ENABLE KEYS */;
1096 8928 aaronmk
1097
--
1098 10446 aaronmk
-- Table structure for table `taxon_path`
1099 8928 aaronmk
--
1100
1101 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1102
/*!40101 SET character_set_client = utf8 */;
1103 10446 aaronmk
CREATE TABLE `taxon_path` (
1104
  `id` varbinary(767) NOT NULL,
1105
  `family` varbinary(767) DEFAULT NULL,
1106
  `genus` varbinary(767) DEFAULT NULL,
1107
  `specific_epithet` varbinary(767) DEFAULT NULL,
1108
  `ranks` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1109 10496 aaronmk
  PRIMARY KEY (`id`)
1110 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"a group of one (or more) populations of organism(s), which a taxonomist adjudges to be a unit" ("Wikipedia":http://en.wikipedia.org/wiki/Taxon)';
1111 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1112 8928 aaronmk
1113
--
1114 10446 aaronmk
-- Dumping data for table `taxon_path`
1115 8928 aaronmk
--
1116
1117 10446 aaronmk
/*!40000 ALTER TABLE `taxon_path` DISABLE KEYS */;
1118
/*!40000 ALTER TABLE `taxon_path` ENABLE KEYS */;
1119 8928 aaronmk
1120
--
1121 10446 aaronmk
-- Table structure for table `taxon_presence`
1122 8928 aaronmk
--
1123
1124 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1125
/*!40101 SET character_set_client = utf8 */;
1126 10446 aaronmk
CREATE TABLE `taxon_presence` (
1127
  `id` varbinary(767) NOT NULL,
1128 10490 aaronmk
  `occurrence_status` varbinary(767) DEFAULT NULL,
1129 10446 aaronmk
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1130
  PRIMARY KEY (`id`),
1131 10489 aaronmk
  CONSTRAINT `fk_taxon_presence_taxon_determination1` FOREIGN KEY (`id`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1132 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of just a [[VegCore#Taxon|Taxon]]''s _presence_';
1133 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
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1135
--
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-- Dumping data for table `taxon_presence`
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--
1138
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/*!40000 ALTER TABLE `taxon_presence` DISABLE KEYS */;
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/*!40000 ALTER TABLE `taxon_presence` ENABLE KEYS */;
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1142
--
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-- Table structure for table `taxon_scrub`
1144
--
1145
1146
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1147
/*!40101 SET character_set_client = utf8 */;
1148
CREATE TABLE `taxon_scrub` (
1149
  `id` varbinary(767) NOT NULL,
1150
  `input_string` varbinary(767) NOT NULL,
1151
  `parsed_taxon_assertion` varbinary(767) NOT NULL,
1152
  `matched_taxon_concept` varbinary(767) DEFAULT NULL,
1153
  `match_score` float DEFAULT NULL,
1154
  `match_info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1155
  PRIMARY KEY (`id`),
1156
  KEY `fk_parsed_taxon_assertion_taxon_name1_idx` (`matched_taxon_concept`),
1157
  KEY `fk_taxon_scrub_taxon_assertion1_idx` (`parsed_taxon_assertion`),
1158
  KEY `fk_taxon_scrub_taxon_string1_idx` (`input_string`),
1159
  CONSTRAINT `fk_parsed_taxon_assertion_taxon_name1` FOREIGN KEY (`matched_taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1160
  CONSTRAINT `fk_taxon_scrub_taxon_assertion1` FOREIGN KEY (`parsed_taxon_assertion`) REFERENCES `taxon_assertion` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1161
  CONSTRAINT `fk_taxon_scrub_taxon_string1` FOREIGN KEY (`input_string`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE,
1162
  CONSTRAINT `fk_taxon_scrub_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1163
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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/*!40101 SET character_set_client = @saved_cs_client */;
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1166
--
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-- Dumping data for table `taxon_scrub`
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--
1169
1170
/*!40000 ALTER TABLE `taxon_scrub` DISABLE KEYS */;
1171
/*!40000 ALTER TABLE `taxon_scrub` ENABLE KEYS */;
1172
1173
--
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-- Table structure for table `taxon_string`
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--
1176
1177 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1178
/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `taxon_string` (
1180
  `string` varbinary(767) NOT NULL,
1181
  PRIMARY KEY (`string`)
1182 10449 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='to get the parsed_taxon_assertion (TNRS result) for a taxon_string, join using taxon_string.string<-taxon_assertion(string)::parsed_taxon_assertion[source=''TNRS.version''] (see wiki.vegpath.org/SQL_dotpaths)';
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/*!40101 SET character_set_client = @saved_cs_client */;
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1185
--
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-- Dumping data for table `taxon_string`
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--
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/*!40000 ALTER TABLE `taxon_string` DISABLE KEYS */;
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/*!40000 ALTER TABLE `taxon_string` ENABLE KEYS */;
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/*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;
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-- Dump completed