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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"An observation applying to all occurrences of an organism based on an aggregation factor" ("VegX":http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/aggregateOrganismObservations/aggregateOrganismObservation)';
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-- Table structure for table `collection`
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CREATE TABLE `collection` (
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  CONSTRAINT `fk_collection_source1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"the collection within the institution where a specimen is held" ("Brad Boyle":https://projects.nceas.ucsb.edu/nceas/attachments/download/621/vegbien_identifier_examples.xlsx#terms/collectionCode)';
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-- Table structure for table `community`
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CREATE TABLE `community` (
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A community type is an abstract grouping of organisms that tend to co-occur on the landscape due to shared ecological requirements or preferences. May be designated by syntaxon or physiognomic types." ([[VegCore#VegX|VegX]])';
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-- Dumping data for table `community`
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/*!40000 ALTER TABLE `community` ENABLE KEYS */;
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/*!40101 SET character_set_client = utf8 */;
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-- Table structure for table `event`
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `event` (
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  CONSTRAINT `fk_event1` FOREIGN KEY (`parent`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_event_place1` FOREIGN KEY (`place`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"an action that occurs at a place and during a period of time" ("DwC":http://rs.tdwg.org/dwc/terms/#Event)';
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-- Dumping data for table `event`
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/*!40000 ALTER TABLE `event` ENABLE KEYS */;
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-- Table structure for table `geological_context`
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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CREATE TABLE `geological_context` (
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  CONSTRAINT `fk_geological_context_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"information pertaining to a location within a geological context, such as stratigraphy" ("DwC":http://rs.tdwg.org/dwc/terms/#GeologicalContext)';
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--
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-- Table structure for table `geopath`
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--
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CREATE TABLE `geopath` (
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A named region';
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--
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-- Dumping data for table `geopath`
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--
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--
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-- Table structure for table `geoplace`
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--
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CREATE TABLE `geoplace` (
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A numerically-defined point';
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--
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-- Dumping data for table `geoplace`
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--
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--
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-- Table structure for table `georeferencing`
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--
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `georeferencing` (
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  PRIMARY KEY (`id`),
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  KEY `fk_georeferencing_party_list1_idx` (`georeferenced_by`),
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  CONSTRAINT `fk_georeferencing_geoplace1` FOREIGN KEY (`geoplace`) REFERENCES `geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_georeferencing_party_list1` FOREIGN KEY (`georeferenced_by`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='also stored GNRS results';
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--
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-- Dumping data for table `georeferencing`
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--
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260
--
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `geovalidation` (
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  CONSTRAINT `fk_geovalidation_geoplace1` FOREIGN KEY (`input_geoplace`) REFERENCES `scrubbed_geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
277
  CONSTRAINT `fk_geovalidation_geoplace2` FOREIGN KEY (`corrected_geoplace`) REFERENCES `scrubbed_geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_geovalidation_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
279 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='The accuracy of the [[VegCore#Coordinates|Coordinates]], taking into account the [[VegCore#Placename|Placename]]';
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--
290 10446 aaronmk
-- Table structure for table `individual`
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `individual` (
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  `place` varbinary(767) NOT NULL,
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  KEY `fk_individual_rel_place1_idx` (`place`),
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  CONSTRAINT `fk_individual_rel_place1` FOREIGN KEY (`place`) REFERENCES `rel_place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_individual_record1` FOREIGN KEY (`id`) REFERENCES `reobservable` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A distinct biological organism';
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/*!40101 SET character_set_client = @saved_cs_client */;
306 8336 aaronmk
307 8928 aaronmk
--
308 10446 aaronmk
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/*!40000 ALTER TABLE `individual` ENABLE KEYS */;
313 8632 aaronmk
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315 10446 aaronmk
-- Table structure for table `individual_observation`
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--
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `individual_observation` (
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  `id` varbinary(767) NOT NULL,
322
  `individual` varbinary(767) DEFAULT NULL,
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  `code` varbinary(767) DEFAULT NULL,
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  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  KEY `fk_individual_observation_individual1_idx` (`individual`),
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  CONSTRAINT `fk_individual_observation_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_individual_observation_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
329 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of an [[VegCore#Individual|Individual]]';
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/*!40101 SET character_set_client = @saved_cs_client */;
331 8336 aaronmk
332 8928 aaronmk
--
333 10446 aaronmk
-- Dumping data for table `individual_observation`
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/*!40000 ALTER TABLE `individual_observation` DISABLE KEYS */;
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/*!40000 ALTER TABLE `individual_observation` ENABLE KEYS */;
338 8336 aaronmk
339 8928 aaronmk
--
340 10446 aaronmk
-- Table structure for table `method`
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--
342 8336 aaronmk
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `method` (
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  `parent` varbinary(767) NOT NULL,
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  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  CONSTRAINT `fk_method_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_method_method1` FOREIGN KEY (`parent`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
353 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A specific method definition followed in the creation of the dataset. Each method links to a protocol and literature citation reference. A protocol may have many method or steps." ("VegX":http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/methods/method)';
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/*!40000 ALTER TABLE `method` ENABLE KEYS */;
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-- Table structure for table `organization`
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `organization` (
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  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  PRIMARY KEY (`id`),
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  CONSTRAINT `fk_organization_party1` FOREIGN KEY (`id`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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378 10446 aaronmk
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380 8581 aaronmk
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/*!40000 ALTER TABLE `organization` ENABLE KEYS */;
383 8632 aaronmk
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--
385 10446 aaronmk
-- Table structure for table `party`
386 8928 aaronmk
--
387 8336 aaronmk
388 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
390 10446 aaronmk
CREATE TABLE `party` (
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  `id` varbinary(767) NOT NULL,
392 10452 aaronmk
  `organization` varbinary(767) DEFAULT NULL,
393 10446 aaronmk
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  PRIMARY KEY (`id`),
395 10452 aaronmk
  KEY `fk_party_organization1_idx` (`organization`),
396 10469 aaronmk
  CONSTRAINT `fk_party_organization1` FOREIGN KEY (`organization`) REFERENCES `organization` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
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  CONSTRAINT `fk_collection_source10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
398 10449 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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/*!40101 SET character_set_client = @saved_cs_client */;
400 8632 aaronmk
401 8928 aaronmk
--
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-- Dumping data for table `party`
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404 8336 aaronmk
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/*!40000 ALTER TABLE `party` DISABLE KEYS */;
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/*!40000 ALTER TABLE `party` ENABLE KEYS */;
407 8336 aaronmk
408 8928 aaronmk
--
409 10453 aaronmk
-- Table structure for table `party_list`
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--
411
412
/*!40101 SET @saved_cs_client     = @@character_set_client */;
413
/*!40101 SET character_set_client = utf8 */;
414
CREATE TABLE `party_list` (
415
  `id` varbinary(767) NOT NULL,
416
  `count` int(11) NOT NULL,
417
  PRIMARY KEY (`id`),
418
  CONSTRAINT `fk_collection_source100` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
419
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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/*!40101 SET character_set_client = @saved_cs_client */;
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422
--
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-- Dumping data for table `party_list`
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--
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/*!40000 ALTER TABLE `party_list` DISABLE KEYS */;
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/*!40000 ALTER TABLE `party_list` ENABLE KEYS */;
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429
--
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-- Table structure for table `party_list_entry`
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--
432
433
/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `party_list_entry` (
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  `id` varbinary(767) NOT NULL,
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  `entry` varbinary(767) NOT NULL,
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  `sort_order` int(11) DEFAULT NULL,
439
  PRIMARY KEY (`id`,`entry`),
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  KEY `fk_party_list_has_party_party1_idx` (`entry`),
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  KEY `fk_party_list_has_party_party_list1_idx` (`id`),
442 10469 aaronmk
  CONSTRAINT `fk_party_list_has_party_party_list1` FOREIGN KEY (`id`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
443
  CONSTRAINT `fk_party_list_has_party_party1` FOREIGN KEY (`entry`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
444 10453 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
445
/*!40101 SET character_set_client = @saved_cs_client */;
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--
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-- Dumping data for table `party_list_entry`
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--
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/*!40000 ALTER TABLE `party_list_entry` DISABLE KEYS */;
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/*!40000 ALTER TABLE `party_list_entry` ENABLE KEYS */;
453
454
--
455 10495 aaronmk
-- Table structure for table `place`
456
--
457
458
/*!40101 SET @saved_cs_client     = @@character_set_client */;
459
/*!40101 SET character_set_client = utf8 */;
460
CREATE TABLE `place` (
461
  `id` varbinary(767) NOT NULL,
462
  `parent` varbinary(767) DEFAULT NULL,
463
  `rank` varbinary(767) DEFAULT NULL,
464
  `name` varbinary(767) DEFAULT NULL,
465
  `geopath` varbinary(767) DEFAULT NULL,
466
  `locality` varbinary(767) DEFAULT NULL,
467
  `verbatim` set('hstore') COLLATE utf8_bin DEFAULT NULL COMMENT 'for verbatim coordinates, etc.',
468
  PRIMARY KEY (`id`),
469
  KEY `fk_place1_idx` (`parent`),
470
  KEY `fk_place_geopath1_idx` (`geopath`),
471
  CONSTRAINT `fk_place1` FOREIGN KEY (`parent`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
472
  CONSTRAINT `fk_place_geopath1` FOREIGN KEY (`geopath`) REFERENCES `geopath` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
473
  CONSTRAINT `fk_place_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
474
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"A spatial region" ("DwC":http://rs.tdwg.org/dwc/terms/#dcterms:Location) or point';
475
/*!40101 SET character_set_client = @saved_cs_client */;
476
477
--
478
-- Dumping data for table `place`
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--
480
481
/*!40000 ALTER TABLE `place` DISABLE KEYS */;
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/*!40000 ALTER TABLE `place` ENABLE KEYS */;
483
484
--
485 10446 aaronmk
-- Table structure for table `place_observation`
486 8928 aaronmk
--
487 8573 aaronmk
488 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
489
/*!40101 SET character_set_client = utf8 */;
490 10446 aaronmk
CREATE TABLE `place_observation` (
491
  `id` varbinary(767) NOT NULL,
492
  `place` varbinary(767) NOT NULL,
493
  `elevation_m` double DEFAULT NULL,
494
  `slope_incline_deg` double DEFAULT NULL,
495
  `slope_direction_deg_N` double DEFAULT NULL,
496
  `geological_context` varbinary(767) DEFAULT NULL,
497
  `community` varbinary(767) DEFAULT NULL,
498
  `observations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
499
  PRIMARY KEY (`id`),
500
  KEY `fk_place_observation_place1_idx` (`place`),
501
  KEY `fk_place_observation_geological_context1_idx` (`geological_context`),
502
  KEY `fk_place_observation_community1_idx` (`community`),
503 10495 aaronmk
  CONSTRAINT `fk_place_observation_place1` FOREIGN KEY (`place`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
504 10469 aaronmk
  CONSTRAINT `fk_place_observation_geological_context1` FOREIGN KEY (`geological_context`) REFERENCES `geological_context` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
505 10468 aaronmk
  CONSTRAINT `fk_place_observation_community1` FOREIGN KEY (`community`) REFERENCES `community` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
506 10460 aaronmk
  CONSTRAINT `fk_place_observation_sampling_event1` FOREIGN KEY (`id`) REFERENCES `sampling_event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
507 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A sampling of a [[VegCore#Location|Location]]';
508 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
509 8573 aaronmk
510 8928 aaronmk
--
511 10446 aaronmk
-- Dumping data for table `place_observation`
512 8928 aaronmk
--
513 8632 aaronmk
514 10446 aaronmk
/*!40000 ALTER TABLE `place_observation` DISABLE KEYS */;
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/*!40000 ALTER TABLE `place_observation` ENABLE KEYS */;
516 8336 aaronmk
517 8928 aaronmk
--
518 10446 aaronmk
-- Table structure for table `plot`
519 8928 aaronmk
--
520 8632 aaronmk
521 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
522
/*!40101 SET character_set_client = utf8 */;
523 10446 aaronmk
CREATE TABLE `plot` (
524
  `id` varbinary(767) NOT NULL,
525
  `name` varbinary(767) DEFAULT NULL,
526
  `area_m2` double DEFAULT NULL,
527 10463 aaronmk
  `shape` varbinary(767) DEFAULT NULL,
528 10499 aaronmk
  `length_m` varbinary(767) DEFAULT NULL,
529
  `width_m` varbinary(767) DEFAULT NULL,
530
  `azimuth_deg_N` varbinary(767) DEFAULT NULL,
531 10462 aaronmk
  `footprint_geom_WKT` varbinary(767) DEFAULT NULL,
532 10465 aaronmk
  `dimensions` set('hstore') COLLATE utf8_bin DEFAULT NULL,
533 10446 aaronmk
  PRIMARY KEY (`id`),
534 10495 aaronmk
  CONSTRAINT `fk_subplot_place1` FOREIGN KEY (`id`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
535 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
536 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
537 8336 aaronmk
538 8928 aaronmk
--
539 10446 aaronmk
-- Dumping data for table `plot`
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--
541 8336 aaronmk
542 10446 aaronmk
/*!40000 ALTER TABLE `plot` DISABLE KEYS */;
543
/*!40000 ALTER TABLE `plot` ENABLE KEYS */;
544 8632 aaronmk
545 8928 aaronmk
--
546 10446 aaronmk
-- Table structure for table `project`
547 8928 aaronmk
--
548 8336 aaronmk
549 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
550
/*!40101 SET character_set_client = utf8 */;
551 10446 aaronmk
CREATE TABLE `project` (
552
  `id` varbinary(767) NOT NULL,
553
  `name` varbinary(767) NOT NULL,
554
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
555
  PRIMARY KEY (`id`),
556
  CONSTRAINT `fk_project_event1` FOREIGN KEY (`id`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
557
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A "project established to collect vegetation plot data. Each plot originates as part of a project." ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=project&entity=dba_tabledescription&where=where_tablename)';
558 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
559 8336 aaronmk
560 8928 aaronmk
--
561 10446 aaronmk
-- Dumping data for table `project`
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--
563 8632 aaronmk
564 10446 aaronmk
/*!40000 ALTER TABLE `project` DISABLE KEYS */;
565
/*!40000 ALTER TABLE `project` ENABLE KEYS */;
566 8336 aaronmk
567 8928 aaronmk
--
568 10446 aaronmk
-- Table structure for table `record`
569 8928 aaronmk
--
570 8336 aaronmk
571 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
572
/*!40101 SET character_set_client = utf8 */;
573 10446 aaronmk
CREATE TABLE `record` (
574
  `id` varbinary(767) NOT NULL,
575
  `source` varbinary(767) NOT NULL,
576
  `source_id_scope` varbinary(767) DEFAULT NULL,
577
  `source_record_id` varbinary(767) DEFAULT NULL,
578
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
579
  PRIMARY KEY (`id`),
580
  UNIQUE KEY `record_unique` (`source`,`source_id_scope`,`source_record_id`),
581
  KEY `fk_record_source1_idx` (`source`),
582
  CONSTRAINT `fk_record_source1` FOREIGN KEY (`source`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
583
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
584 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
585 8632 aaronmk
586 8928 aaronmk
--
587 10446 aaronmk
-- Dumping data for table `record`
588 8928 aaronmk
--
589 8532 aaronmk
590 10446 aaronmk
/*!40000 ALTER TABLE `record` DISABLE KEYS */;
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/*!40000 ALTER TABLE `record` ENABLE KEYS */;
592 8532 aaronmk
593 8928 aaronmk
--
594 10446 aaronmk
-- Table structure for table `referenced_class`
595 8928 aaronmk
--
596 8632 aaronmk
597 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
599 10446 aaronmk
CREATE TABLE `referenced_class` (
600
  `id` varbinary(767) NOT NULL,
601
  PRIMARY KEY (`id`),
602
  CONSTRAINT `fk_example_record10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
603
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
604 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
605 8565 aaronmk
606 8928 aaronmk
--
607 10446 aaronmk
-- Dumping data for table `referenced_class`
608 8928 aaronmk
--
609 8565 aaronmk
610 10446 aaronmk
/*!40000 ALTER TABLE `referenced_class` DISABLE KEYS */;
611
/*!40000 ALTER TABLE `referenced_class` ENABLE KEYS */;
612 8632 aaronmk
613 8928 aaronmk
--
614 10497 aaronmk
-- Table structure for table `rel_place`
615
--
616
617
/*!40101 SET @saved_cs_client     = @@character_set_client */;
618
/*!40101 SET character_set_client = utf8 */;
619
CREATE TABLE `rel_place` (
620
  `id` varbinary(767) NOT NULL,
621 10522 aaronmk
  `parent` varbinary(767) NOT NULL,
622 10497 aaronmk
  `x_m` double DEFAULT NULL,
623
  `y_m` double DEFAULT NULL,
624
  `coords` set('hstore') COLLATE utf8_bin DEFAULT NULL,
625
  PRIMARY KEY (`id`),
626 10522 aaronmk
  KEY `fk_rel_place_place1_idx` (`parent`),
627
  CONSTRAINT `fk_rel_place_place1` FOREIGN KEY (`parent`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
628 10497 aaronmk
  CONSTRAINT `fk_subplot_place2` FOREIGN KEY (`id`) REFERENCES `place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
629
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='stores plot elements such as subplots ("subplot, line, or any other subsample  or subdivision of plot" ("SALVIAS":http://salvias.net/Documents/salvias_data_dictionary.html#Plot_data/subplot))';
630
/*!40101 SET character_set_client = @saved_cs_client */;
631
632
--
633
-- Dumping data for table `rel_place`
634
--
635
636
/*!40000 ALTER TABLE `rel_place` DISABLE KEYS */;
637
/*!40000 ALTER TABLE `rel_place` ENABLE KEYS */;
638
639
--
640 10446 aaronmk
-- Table structure for table `relationship`
641 8928 aaronmk
--
642 8623 aaronmk
643 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
644
/*!40101 SET character_set_client = utf8 */;
645 10446 aaronmk
CREATE TABLE `relationship` (
646
  `id` varbinary(767) NOT NULL,
647
  `record` varbinary(767) NOT NULL,
648
  `related_record` varbinary(767) NOT NULL,
649
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
650
  PRIMARY KEY (`id`),
651
  KEY `fk_relationship_record1_idx` (`record`),
652
  KEY `fk_relationship_related_record_idx` (`related_record`),
653
  CONSTRAINT `fk_relationship_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
654
  CONSTRAINT `fk_relationship_record2` FOREIGN KEY (`record`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
655
  CONSTRAINT `fk_relationship_related_record` FOREIGN KEY (`related_record`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
656
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"information pertaining to relationships between resources (instances of data records, such as Occurrences, Taxa, Locations, Events)" ("DwC":http://rs.tdwg.org/dwc/terms/#ResourceRelationship)';
657 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
658 8623 aaronmk
659 8928 aaronmk
--
660 10446 aaronmk
-- Dumping data for table `relationship`
661 8928 aaronmk
--
662 8632 aaronmk
663 10446 aaronmk
/*!40000 ALTER TABLE `relationship` DISABLE KEYS */;
664
/*!40000 ALTER TABLE `relationship` ENABLE KEYS */;
665 8623 aaronmk
666 8928 aaronmk
--
667 10487 aaronmk
-- Table structure for table `reobservable`
668
--
669
670
/*!40101 SET @saved_cs_client     = @@character_set_client */;
671
/*!40101 SET character_set_client = utf8 */;
672
CREATE TABLE `reobservable` (
673
  `id` varbinary(767) NOT NULL,
674
  `current_determination` varbinary(767) DEFAULT NULL,
675
  `original_determination` varbinary(767) DEFAULT NULL,
676
  PRIMARY KEY (`id`),
677
  KEY `fk_taxon_occurrence_taxon_determination1_idx` (`original_determination`),
678
  KEY `fk_taxon_occurrence_taxon_determination2_idx` (`current_determination`),
679
  CONSTRAINT `fk_taxon_occurrence_taxon_determination1` FOREIGN KEY (`original_determination`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
680
  CONSTRAINT `fk_taxon_occurrence_taxon_determination2` FOREIGN KEY (`current_determination`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
681
  CONSTRAINT `fk_taxon_occurrence_event1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
682
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='Any entity on which [[VegCore#TaxonDetermination|TaxonDetermination]]s can be made';
683
/*!40101 SET character_set_client = @saved_cs_client */;
684
685
--
686
-- Dumping data for table `reobservable`
687
--
688
689
/*!40000 ALTER TABLE `reobservable` DISABLE KEYS */;
690
/*!40000 ALTER TABLE `reobservable` ENABLE KEYS */;
691
692
--
693 10460 aaronmk
-- Table structure for table `sampling_event`
694
--
695
696
/*!40101 SET @saved_cs_client     = @@character_set_client */;
697
/*!40101 SET character_set_client = utf8 */;
698
CREATE TABLE `sampling_event` (
699
  `id` varbinary(767) NOT NULL,
700
  `method` varbinary(767) DEFAULT NULL,
701
  PRIMARY KEY (`id`),
702
  KEY `fk_sampling_event_method1_idx` (`method`),
703 10469 aaronmk
  CONSTRAINT `fk_sampling_event_method1` FOREIGN KEY (`method`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
704
  CONSTRAINT `fk_project_event10` FOREIGN KEY (`id`) REFERENCES `event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
705 10460 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
706
/*!40101 SET character_set_client = @saved_cs_client */;
707
708
--
709
-- Dumping data for table `sampling_event`
710
--
711
712
/*!40000 ALTER TABLE `sampling_event` DISABLE KEYS */;
713
/*!40000 ALTER TABLE `sampling_event` ENABLE KEYS */;
714
715
--
716 10495 aaronmk
-- Table structure for table `scrubbed_geoplace`
717
--
718
719
/*!40101 SET @saved_cs_client     = @@character_set_client */;
720
/*!40101 SET character_set_client = utf8 */;
721
CREATE TABLE `scrubbed_geoplace` (
722
  `id` varbinary(767) NOT NULL,
723
  `parent_geoplace` varbinary(767) NOT NULL,
724
  PRIMARY KEY (`id`),
725
  KEY `fk_geoplace_geoplace1_idx` (`parent_geoplace`),
726
  CONSTRAINT `fk_geoplace_geoplace1` FOREIGN KEY (`parent_geoplace`) REFERENCES `scrubbed_geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
727
  CONSTRAINT `fk_nested_geoplace_geoplace1` FOREIGN KEY (`id`) REFERENCES `geoplace` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
728
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='stores only scrubbed geoplaces (GADM places, and distinct point coordinates that GNRS says should be located within them)';
729
/*!40101 SET character_set_client = @saved_cs_client */;
730
731
--
732
-- Dumping data for table `scrubbed_geoplace`
733
--
734
735
/*!40000 ALTER TABLE `scrubbed_geoplace` DISABLE KEYS */;
736
/*!40000 ALTER TABLE `scrubbed_geoplace` ENABLE KEYS */;
737
738
--
739 10446 aaronmk
-- Table structure for table `soil_observation`
740 8928 aaronmk
--
741 8623 aaronmk
742 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
743
/*!40101 SET character_set_client = utf8 */;
744 10446 aaronmk
CREATE TABLE `soil_observation` (
745
  `id` varbinary(767) NOT NULL,
746
  `observations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
747
  PRIMARY KEY (`id`),
748
  CONSTRAINT `fk_soil_observation_place_observation1` FOREIGN KEY (`id`) REFERENCES `place_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
749
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A sampling of a [[VegCore#Location|Location]]''s soil';
750 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
751 8632 aaronmk
752 8928 aaronmk
--
753 10446 aaronmk
-- Dumping data for table `soil_observation`
754 8928 aaronmk
--
755 8623 aaronmk
756 10446 aaronmk
/*!40000 ALTER TABLE `soil_observation` DISABLE KEYS */;
757
/*!40000 ALTER TABLE `soil_observation` ENABLE KEYS */;
758 8623 aaronmk
759 8928 aaronmk
--
760 10446 aaronmk
-- Table structure for table `source`
761 8928 aaronmk
--
762 8632 aaronmk
763 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
764
/*!40101 SET character_set_client = utf8 */;
765 10446 aaronmk
CREATE TABLE `source` (
766
  `id` varbinary(767) NOT NULL,
767 10498 aaronmk
  `parent` varbinary(767) DEFAULT NULL,
768 10446 aaronmk
  `name` varbinary(767) NOT NULL,
769
  `first_publisher` varbinary(767) DEFAULT NULL,
770
  `owner` varbinary(767) DEFAULT NULL,
771
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
772
  PRIMARY KEY (`id`),
773
  UNIQUE KEY `source_unique` (`parent`,`name`),
774
  KEY `fk_source1_idx` (`parent`),
775
  KEY `fk_source_party1_idx` (`owner`),
776
  KEY `fk_source_party2_idx` (`first_publisher`),
777
  CONSTRAINT `fk_source1` FOREIGN KEY (`parent`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
778
  CONSTRAINT `fk_source_party1` FOREIGN KEY (`owner`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
779
  CONSTRAINT `fk_source_party2` FOREIGN KEY (`first_publisher`) REFERENCES `party` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
780
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='a "reference [...] cited within the database" ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=reference&entity=dba_tabledescription&where=where_tablename)';
781 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
782 8336 aaronmk
783 8928 aaronmk
--
784 10446 aaronmk
-- Dumping data for table `source`
785 8928 aaronmk
--
786 8336 aaronmk
787 10446 aaronmk
/*!40000 ALTER TABLE `source` DISABLE KEYS */;
788
/*!40000 ALTER TABLE `source` ENABLE KEYS */;
789 8632 aaronmk
790 8928 aaronmk
--
791 10446 aaronmk
-- Table structure for table `specimen`
792 8928 aaronmk
--
793 8336 aaronmk
794 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
795
/*!40101 SET character_set_client = utf8 */;
796 10446 aaronmk
CREATE TABLE `specimen` (
797
  `id` varbinary(767) NOT NULL,
798
  `individual` varbinary(767) DEFAULT NULL,
799
  `code_in_individual` varbinary(767) DEFAULT NULL,
800
  `collection_event` varbinary(767) DEFAULT NULL,
801
  `orig_collection` varbinary(767) DEFAULT NULL,
802
  `barcode` varbinary(767) DEFAULT NULL,
803
  `accession_number` varbinary(767) DEFAULT NULL,
804 10454 aaronmk
  `specimenholder_institutions` varbinary(767) DEFAULT NULL,
805 10446 aaronmk
  `current_collection` varbinary(767) DEFAULT NULL,
806
  `owner_collection` varbinary(767) DEFAULT NULL,
807
  PRIMARY KEY (`id`),
808
  UNIQUE KEY `specimen_unique_in_individual` (`individual`,`code_in_individual`),
809
  UNIQUE KEY `specimen_unique_by_collection_event` (`collection_event`),
810
  UNIQUE KEY `specimen_unique_in_collection_by_barcode` (`orig_collection`,`barcode`),
811
  UNIQUE KEY `specimen_unique_in_collection_by_accession_number` (`orig_collection`,`accession_number`),
812
  KEY `fk_specimen_collection1_idx` (`orig_collection`),
813
  KEY `fk_specimen_taxon_observation1_idx` (`collection_event`),
814
  KEY `fk_specimen_individual1_idx` (`individual`),
815
  KEY `fk_specimen_collection2_idx` (`current_collection`),
816
  KEY `fk_specimen_organization3_idx` (`owner_collection`),
817 10454 aaronmk
  KEY `fk_specimen_party_list1_idx` (`specimenholder_institutions`),
818 10493 aaronmk
  CONSTRAINT `fk_specimen_organization3` FOREIGN KEY (`owner_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
819
  CONSTRAINT `fk_specimen_taxon_observation1` FOREIGN KEY (`collection_event`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
820
  CONSTRAINT `fk_specimen_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
821 10487 aaronmk
  CONSTRAINT `fk_specimen_collection2` FOREIGN KEY (`current_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
822 10468 aaronmk
  CONSTRAINT `fk_specimen_party_list1` FOREIGN KEY (`specimenholder_institutions`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
823 10493 aaronmk
  CONSTRAINT `fk_specimen_collection1` FOREIGN KEY (`orig_collection`) REFERENCES `collection` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
824
  CONSTRAINT `fk_specimen_taxon_occurrence1` FOREIGN KEY (`id`) REFERENCES `reobservable` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
825 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A "part of a plant" ("Wikipedia":http://en.wikipedia.org/wiki/Specimen) which was collected from it';
826 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
827 8521 aaronmk
828 8928 aaronmk
--
829 10446 aaronmk
-- Dumping data for table `specimen`
830 8928 aaronmk
--
831 8632 aaronmk
832 10446 aaronmk
/*!40000 ALTER TABLE `specimen` DISABLE KEYS */;
833
/*!40000 ALTER TABLE `specimen` ENABLE KEYS */;
834 8521 aaronmk
835 8928 aaronmk
--
836 10446 aaronmk
-- Table structure for table `specimen_observation`
837 8928 aaronmk
--
838 8521 aaronmk
839 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
840
/*!40101 SET character_set_client = utf8 */;
841 10446 aaronmk
CREATE TABLE `specimen_observation` (
842
  `id` varbinary(767) NOT NULL,
843
  `specimen` varbinary(767) NOT NULL,
844 10490 aaronmk
  `description` varbinary(767) DEFAULT NULL,
845 10446 aaronmk
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
846
  PRIMARY KEY (`id`),
847
  KEY `fk_specimen_observation_specimen1_idx` (`specimen`),
848 10469 aaronmk
  CONSTRAINT `fk_specimen_taxon_occurrence10` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
849
  CONSTRAINT `fk_specimen_observation_specimen1` FOREIGN KEY (`specimen`) REFERENCES `specimen` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
850 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
851 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
852 8632 aaronmk
853 8928 aaronmk
--
854 10446 aaronmk
-- Dumping data for table `specimen_observation`
855 8928 aaronmk
--
856 8521 aaronmk
857 10446 aaronmk
/*!40000 ALTER TABLE `specimen_observation` DISABLE KEYS */;
858
/*!40000 ALTER TABLE `specimen_observation` ENABLE KEYS */;
859 8521 aaronmk
860 8928 aaronmk
--
861 10446 aaronmk
-- Table structure for table `stem`
862 8928 aaronmk
--
863 8632 aaronmk
864 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
865
/*!40101 SET character_set_client = utf8 */;
866 10446 aaronmk
CREATE TABLE `stem` (
867
  `id` varbinary(767) NOT NULL,
868 10492 aaronmk
  `individual` varbinary(767) DEFAULT NULL,
869 10446 aaronmk
  PRIMARY KEY (`id`),
870
  KEY `fk_stem_individual1_idx` (`individual`),
871
  CONSTRAINT `fk_stem_individual1` FOREIGN KEY (`individual`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
872
  CONSTRAINT `fk_stem_individual2` FOREIGN KEY (`id`) REFERENCES `individual` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
873
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An "individual tree stem" ("VegBank":http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=stemlocation&entity=dba_tabledescription&where=where_tablename)';
874 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
875 8521 aaronmk
876 8928 aaronmk
--
877 10446 aaronmk
-- Dumping data for table `stem`
878 8928 aaronmk
--
879 8533 aaronmk
880 10446 aaronmk
/*!40000 ALTER TABLE `stem` DISABLE KEYS */;
881
/*!40000 ALTER TABLE `stem` ENABLE KEYS */;
882 8632 aaronmk
883 8928 aaronmk
--
884 10446 aaronmk
-- Table structure for table `stem_observation`
885 8928 aaronmk
--
886 8561 aaronmk
887 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
888
/*!40101 SET character_set_client = utf8 */;
889 10446 aaronmk
CREATE TABLE `stem_observation` (
890
  `id` varbinary(767) NOT NULL,
891 10492 aaronmk
  `individual_observation` varbinary(767) DEFAULT NULL,
892 10446 aaronmk
  `stem` varbinary(767) DEFAULT NULL,
893
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
894
  PRIMARY KEY (`id`),
895
  UNIQUE KEY `stem_observation_unique` (`individual_observation`,`stem`),
896
  KEY `fk_stem_observation_individual_observation1_idx` (`individual_observation`),
897
  KEY `fk_stem_observation_stem1_idx` (`stem`),
898 10469 aaronmk
  CONSTRAINT `fk_stem_observation_stem1` FOREIGN KEY (`stem`) REFERENCES `stem` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
899 10446 aaronmk
  CONSTRAINT `fk_stem_observation_individual_observation1` FOREIGN KEY (`individual_observation`) REFERENCES `individual_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
900 10469 aaronmk
  CONSTRAINT `fk_stem_observation_individual_observation2` FOREIGN KEY (`id`) REFERENCES `individual_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
901 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of a [[VegCore#Stem|Stem]]';
902 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
903 8567 aaronmk
904 8928 aaronmk
--
905 10446 aaronmk
-- Dumping data for table `stem_observation`
906 8928 aaronmk
--
907 8632 aaronmk
908 10446 aaronmk
/*!40000 ALTER TABLE `stem_observation` DISABLE KEYS */;
909
/*!40000 ALTER TABLE `stem_observation` ENABLE KEYS */;
910 8567 aaronmk
911 8928 aaronmk
--
912 10446 aaronmk
-- Table structure for table `stratum`
913 8928 aaronmk
--
914 8573 aaronmk
915 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
916
/*!40101 SET character_set_client = utf8 */;
917 10446 aaronmk
CREATE TABLE `stratum` (
918
  `id` varbinary(767) NOT NULL,
919
  `name` varbinary(767) NOT NULL,
920
  `info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
921
  PRIMARY KEY (`id`),
922
  CONSTRAINT `fk_place_path_record10` FOREIGN KEY (`id`) REFERENCES `method` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
923
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
924 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
925 8632 aaronmk
926 8928 aaronmk
--
927 10446 aaronmk
-- Dumping data for table `stratum`
928 8928 aaronmk
--
929 8573 aaronmk
930 10446 aaronmk
/*!40000 ALTER TABLE `stratum` DISABLE KEYS */;
931
/*!40000 ALTER TABLE `stratum` ENABLE KEYS */;
932 8581 aaronmk
933 8928 aaronmk
--
934 10519 aaronmk
-- Table structure for table `subplot`
935
--
936
937
/*!40101 SET @saved_cs_client     = @@character_set_client */;
938
/*!40101 SET character_set_client = utf8 */;
939
CREATE TABLE `subplot` (
940
  `id` varbinary(767) NOT NULL,
941 10522 aaronmk
  `parent_plot` varbinary(767) NOT NULL,
942 10519 aaronmk
  PRIMARY KEY (`id`),
943 10522 aaronmk
  KEY `fk_subplot_plot2_idx` (`parent_plot`),
944
  CONSTRAINT `fk_subplot_plot2` FOREIGN KEY (`parent_plot`) REFERENCES `plot` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
945
  CONSTRAINT `fk_subplot_rel_place1` FOREIGN KEY (`id`) REFERENCES `rel_place` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
946
  CONSTRAINT `fk_subplot_plot1` FOREIGN KEY (`id`) REFERENCES `plot` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
947 10519 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
948
/*!40101 SET character_set_client = @saved_cs_client */;
949
950
--
951
-- Dumping data for table `subplot`
952
--
953
954
/*!40000 ALTER TABLE `subplot` DISABLE KEYS */;
955
/*!40000 ALTER TABLE `subplot` ENABLE KEYS */;
956
957
--
958 10457 aaronmk
-- Table structure for table `taxon_absence`
959
--
960
961
/*!40101 SET @saved_cs_client     = @@character_set_client */;
962
/*!40101 SET character_set_client = utf8 */;
963
CREATE TABLE `taxon_absence` (
964
  `id` varbinary(767) NOT NULL,
965
  PRIMARY KEY (`id`),
966 10489 aaronmk
  CONSTRAINT `fk_taxon_absence_taxon_determination1` FOREIGN KEY (`id`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
967 10457 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation that a [[VegCore#Taxon|Taxon]]''s does _not_ exist in a place';
968
/*!40101 SET character_set_client = @saved_cs_client */;
969
970
--
971
-- Dumping data for table `taxon_absence`
972
--
973
974
/*!40000 ALTER TABLE `taxon_absence` DISABLE KEYS */;
975
/*!40000 ALTER TABLE `taxon_absence` ENABLE KEYS */;
976
977
--
978 10446 aaronmk
-- Table structure for table `taxon_assertion`
979 8928 aaronmk
--
980 8593 aaronmk
981 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
982
/*!40101 SET character_set_client = utf8 */;
983 10446 aaronmk
CREATE TABLE `taxon_assertion` (
984
  `id` varbinary(767) NOT NULL,
985
  `string` varbinary(767) NOT NULL COMMENT 'for parsed_taxon_assertion, this is the TNRS input name, not the concatenated matched name',
986
  `taxon` varbinary(767) DEFAULT NULL,
987
  `cf_aff` varbinary(767) DEFAULT NULL,
988
  `annotations` set('hstore') COLLATE utf8_bin DEFAULT NULL,
989
  PRIMARY KEY (`id`),
990
  KEY `fk_taxon_assertion_taxon_string1_idx` (`string`),
991
  KEY `fk_taxon_assertion_taxon_name1_idx` (`taxon`),
992
  CONSTRAINT `fk_qualified_taxon_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
993 10469 aaronmk
  CONSTRAINT `fk_taxon_assertion_taxon_string1` FOREIGN KEY (`string`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE,
994
  CONSTRAINT `fk_taxon_assertion_taxon_name1` FOREIGN KEY (`taxon`) REFERENCES `taxon_name` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
995 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
996 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
997 8594 aaronmk
998 8928 aaronmk
--
999 10446 aaronmk
-- Dumping data for table `taxon_assertion`
1000 8928 aaronmk
--
1001 8594 aaronmk
1002 10446 aaronmk
/*!40000 ALTER TABLE `taxon_assertion` DISABLE KEYS */;
1003
/*!40000 ALTER TABLE `taxon_assertion` ENABLE KEYS */;
1004 8928 aaronmk
1005
--
1006 10446 aaronmk
-- Table structure for table `taxon_concept`
1007 8928 aaronmk
--
1008
1009 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1010
/*!40101 SET character_set_client = utf8 */;
1011 10446 aaronmk
CREATE TABLE `taxon_concept` (
1012
  `id` varbinary(767) NOT NULL,
1013
  `according_to` varbinary(767) NOT NULL,
1014 10498 aaronmk
  `parent` varbinary(767) DEFAULT NULL,
1015 10446 aaronmk
  `accepted_taxon_concept` varbinary(767) DEFAULT NULL,
1016
  PRIMARY KEY (`id`),
1017
  UNIQUE KEY `taxon_concept_unique_name` (`according_to`),
1018
  KEY `fk_taxon_taxon1_idx` (`parent`),
1019
  KEY `fk_taxon_concept_source1_idx` (`according_to`),
1020
  KEY `fk_taxon_concept_taxon_concept1_idx` (`accepted_taxon_concept`),
1021 10469 aaronmk
  CONSTRAINT `fk_taxon_taxon1` FOREIGN KEY (`parent`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1022 10446 aaronmk
  CONSTRAINT `fk_taxon_concept_source1` FOREIGN KEY (`according_to`) REFERENCES `source` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1023
  CONSTRAINT `fk_taxon_concept_taxon_concept1` FOREIGN KEY (`accepted_taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1024 10469 aaronmk
  CONSTRAINT `fk_taxon_concept_taxon_name1` FOREIGN KEY (`id`) REFERENCES `taxon_name` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1025 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='A [[VegCore#Taxon|Taxon]] described by a specific [[VegCore#Reference|Reference]]';
1026 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1027 8928 aaronmk
1028
--
1029 10446 aaronmk
-- Dumping data for table `taxon_concept`
1030 8928 aaronmk
--
1031
1032 10446 aaronmk
/*!40000 ALTER TABLE `taxon_concept` DISABLE KEYS */;
1033
/*!40000 ALTER TABLE `taxon_concept` ENABLE KEYS */;
1034 8928 aaronmk
1035
--
1036 10446 aaronmk
-- Table structure for table `taxon_determination`
1037 8928 aaronmk
--
1038
1039 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1040
/*!40101 SET character_set_client = utf8 */;
1041 10446 aaronmk
CREATE TABLE `taxon_determination` (
1042
  `id` varbinary(767) NOT NULL,
1043 10473 aaronmk
  `identified_by` varbinary(767) DEFAULT NULL,
1044 10446 aaronmk
  `taxon_assertion` varbinary(767) NOT NULL,
1045
  `fit_info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1046
  PRIMARY KEY (`id`),
1047
  UNIQUE KEY `taxon_determination_unique` (`taxon_assertion`,`identified_by`),
1048
  KEY `fk_taxon_occurrence_has_qualified_taxon1_idx` (`taxon_assertion`),
1049 10455 aaronmk
  KEY `fk_taxon_determination_party_list1_idx` (`identified_by`),
1050 10493 aaronmk
  CONSTRAINT `fk_taxon_occurrence_has_qualified_taxon1` FOREIGN KEY (`taxon_assertion`) REFERENCES `taxon_assertion` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1051 10473 aaronmk
  CONSTRAINT `fk_taxon_determination_party_list1` FOREIGN KEY (`identified_by`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1052 10493 aaronmk
  CONSTRAINT `fk_taxon_determination_taxon_observation1` FOREIGN KEY (`id`) REFERENCES `taxon_observation` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1053 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An assertion that a [[VegCore#TaxonOccurrence|TaxonOccurrence]] is a particular [[VegCore#Taxon|Taxon]]';
1054 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1055 8928 aaronmk
1056
--
1057 10446 aaronmk
-- Dumping data for table `taxon_determination`
1058 8928 aaronmk
--
1059
1060 10446 aaronmk
/*!40000 ALTER TABLE `taxon_determination` DISABLE KEYS */;
1061
/*!40000 ALTER TABLE `taxon_determination` ENABLE KEYS */;
1062 8928 aaronmk
1063
--
1064 10446 aaronmk
-- Table structure for table `taxon_name`
1065 8928 aaronmk
--
1066
1067 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1068
/*!40101 SET character_set_client = utf8 */;
1069 10446 aaronmk
CREATE TABLE `taxon_name` (
1070
  `id` varbinary(767) NOT NULL,
1071
  `unique_name` varbinary(767) NOT NULL,
1072
  `formal_name` varbinary(767) DEFAULT NULL,
1073
  `taxon_name` varbinary(767) DEFAULT NULL,
1074
  `author` varbinary(767) DEFAULT NULL,
1075
  `common_name` varbinary(767) DEFAULT NULL,
1076
  `rank` varbinary(767) DEFAULT NULL,
1077 10496 aaronmk
  `taxon_path` varbinary(767) DEFAULT NULL,
1078 10446 aaronmk
  PRIMARY KEY (`id`),
1079
  KEY `fk_taxon_concept_taxon_string10_idx` (`unique_name`),
1080 10496 aaronmk
  KEY `fk_taxon_name_taxon_path1_idx` (`taxon_path`),
1081 10469 aaronmk
  CONSTRAINT `fk_taxon_record10` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1082 10496 aaronmk
  CONSTRAINT `fk_taxon_concept_taxon_string10` FOREIGN KEY (`unique_name`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE,
1083
  CONSTRAINT `fk_taxon_name_taxon_path1` FOREIGN KEY (`taxon_path`) REFERENCES `taxon_path` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1084 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
1085 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1086 8928 aaronmk
1087
--
1088 10446 aaronmk
-- Dumping data for table `taxon_name`
1089 8928 aaronmk
--
1090
1091 10446 aaronmk
/*!40000 ALTER TABLE `taxon_name` DISABLE KEYS */;
1092
/*!40000 ALTER TABLE `taxon_name` ENABLE KEYS */;
1093 8928 aaronmk
1094
--
1095 10446 aaronmk
-- Table structure for table `taxon_observation`
1096 8928 aaronmk
--
1097
1098 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
1099
/*!40101 SET character_set_client = utf8 */;
1100 10446 aaronmk
CREATE TABLE `taxon_observation` (
1101
  `id` varbinary(767) NOT NULL,
1102 10455 aaronmk
  `collectors` varbinary(767) DEFAULT NULL,
1103 10446 aaronmk
  `collector_number` varbinary(767) DEFAULT NULL,
1104
  `voucher` varbinary(767) DEFAULT NULL,
1105
  `growth_form` varbinary(767) DEFAULT NULL,
1106
  `cultivated` tinyint(1) DEFAULT NULL,
1107
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1108
  PRIMARY KEY (`id`),
1109
  KEY `fk_taxon_observation_specimen1_idx` (`voucher`),
1110 10455 aaronmk
  KEY `fk_taxon_observation_party_list1_idx` (`collectors`),
1111 10457 aaronmk
  CONSTRAINT `fk_taxon_observation_party_list1` FOREIGN KEY (`collectors`) REFERENCES `party_list` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1112 10460 aaronmk
  CONSTRAINT `fk_taxon_observation_sampling_event1` FOREIGN KEY (`id`) REFERENCES `sampling_event` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1113 10487 aaronmk
  CONSTRAINT `fk_taxon_observation_specimen1` FOREIGN KEY (`voucher`) REFERENCES `specimen` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1114 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
1115 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
1116 8928 aaronmk
1117
--
1118 10446 aaronmk
-- Dumping data for table `taxon_observation`
1119 8928 aaronmk
--
1120
1121 10446 aaronmk
/*!40000 ALTER TABLE `taxon_observation` DISABLE KEYS */;
1122
/*!40000 ALTER TABLE `taxon_observation` ENABLE KEYS */;
1123 8928 aaronmk
1124
--
1125 10446 aaronmk
-- Table structure for table `taxon_path`
1126 8928 aaronmk
--
1127
1128 9630 aaronmk
/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `taxon_path` (
1131
  `id` varbinary(767) NOT NULL,
1132
  `family` varbinary(767) DEFAULT NULL,
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  `genus` varbinary(767) DEFAULT NULL,
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  `specific_epithet` varbinary(767) DEFAULT NULL,
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  `ranks` set('hstore') COLLATE utf8_bin DEFAULT NULL,
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  PRIMARY KEY (`id`)
1137 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='"a group of one (or more) populations of organism(s), which a taxonomist adjudges to be a unit" ("Wikipedia":http://en.wikipedia.org/wiki/Taxon)';
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/*!40101 SET character_set_client = @saved_cs_client */;
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--
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-- Dumping data for table `taxon_path`
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--
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/*!40000 ALTER TABLE `taxon_path` DISABLE KEYS */;
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/*!40000 ALTER TABLE `taxon_path` ENABLE KEYS */;
1146 8928 aaronmk
1147
--
1148 10446 aaronmk
-- Table structure for table `taxon_presence`
1149 8928 aaronmk
--
1150
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
1153 10446 aaronmk
CREATE TABLE `taxon_presence` (
1154
  `id` varbinary(767) NOT NULL,
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  `occurrence_status` varbinary(767) DEFAULT NULL,
1156 10446 aaronmk
  `traits` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1157
  PRIMARY KEY (`id`),
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  CONSTRAINT `fk_taxon_presence_taxon_determination1` FOREIGN KEY (`id`) REFERENCES `taxon_determination` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1159 10446 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='An observation of just a [[VegCore#Taxon|Taxon]]''s _presence_';
1160 9630 aaronmk
/*!40101 SET character_set_client = @saved_cs_client */;
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--
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-- Dumping data for table `taxon_presence`
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--
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/*!40000 ALTER TABLE `taxon_presence` DISABLE KEYS */;
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/*!40000 ALTER TABLE `taxon_presence` ENABLE KEYS */;
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1169
--
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-- Table structure for table `taxon_scrub`
1171
--
1172
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
1175
CREATE TABLE `taxon_scrub` (
1176
  `id` varbinary(767) NOT NULL,
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  `input_string` varbinary(767) NOT NULL,
1178
  `parsed_taxon_assertion` varbinary(767) NOT NULL,
1179
  `matched_taxon_concept` varbinary(767) DEFAULT NULL,
1180
  `match_score` float DEFAULT NULL,
1181
  `match_info` set('hstore') COLLATE utf8_bin DEFAULT NULL,
1182
  PRIMARY KEY (`id`),
1183
  KEY `fk_parsed_taxon_assertion_taxon_name1_idx` (`matched_taxon_concept`),
1184
  KEY `fk_taxon_scrub_taxon_assertion1_idx` (`parsed_taxon_assertion`),
1185
  KEY `fk_taxon_scrub_taxon_string1_idx` (`input_string`),
1186
  CONSTRAINT `fk_parsed_taxon_assertion_taxon_name1` FOREIGN KEY (`matched_taxon_concept`) REFERENCES `taxon_concept` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1187
  CONSTRAINT `fk_taxon_scrub_taxon_assertion1` FOREIGN KEY (`parsed_taxon_assertion`) REFERENCES `taxon_assertion` (`id`) ON DELETE CASCADE ON UPDATE CASCADE,
1188
  CONSTRAINT `fk_taxon_scrub_taxon_string1` FOREIGN KEY (`input_string`) REFERENCES `taxon_string` (`string`) ON DELETE CASCADE ON UPDATE CASCADE,
1189
  CONSTRAINT `fk_taxon_scrub_record1` FOREIGN KEY (`id`) REFERENCES `record` (`id`) ON DELETE CASCADE ON UPDATE CASCADE
1190
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
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/*!40101 SET character_set_client = @saved_cs_client */;
1192
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--
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-- Dumping data for table `taxon_scrub`
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--
1196
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/*!40000 ALTER TABLE `taxon_scrub` DISABLE KEYS */;
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/*!40000 ALTER TABLE `taxon_scrub` ENABLE KEYS */;
1199
1200
--
1201 10446 aaronmk
-- Table structure for table `taxon_string`
1202 8928 aaronmk
--
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/*!40101 SET @saved_cs_client     = @@character_set_client */;
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/*!40101 SET character_set_client = utf8 */;
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CREATE TABLE `taxon_string` (
1207
  `string` varbinary(767) NOT NULL,
1208
  PRIMARY KEY (`string`)
1209 10449 aaronmk
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin COMMENT='to get the parsed_taxon_assertion (TNRS result) for a taxon_string, join using taxon_string.string<-taxon_assertion(string)::parsed_taxon_assertion[source=''TNRS.version''] (see wiki.vegpath.org/SQL_dotpaths)';
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/*!40101 SET character_set_client = @saved_cs_client */;
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--
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-- Dumping data for table `taxon_string`
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--
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/*!40000 ALTER TABLE `taxon_string` DISABLE KEYS */;
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/*!40000 ALTER TABLE `taxon_string` ENABLE KEYS */;
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