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Revision 10564

Added by Aaron Marcuse-Kubitza over 11 years ago

inputs/NCU/Specimen/map.csv: CityLocality: remapped to municipality because this is a placename, not a verbatim locality description

View differences:

inputs/NCU/Specimen/map.csv
19 19 
LandOwner,*LandOwner,,
20 20 
BlockLocationReason,*BlockLocationReason,,
21 21 
BlockSpecificLocation,*BlockSpecificLocation,,
22 
VerbatimLocality,verbatimLocality,/_alt/1,
22 
VerbatimLocality,verbatimLocality,,
23 23 
EventRemarks,eventRemarks,,
24 24 
Country,country,,
25 25 
State,stateProvince,,
26 26 
county,county,,
27 27 
FIPSStateCounty,*FIPSStateCounty,,
28 
CityLocality,verbatimLocality,/_alt/2,
28 
CityLocality,municipality,,
29 29 
Cultivated,cultivated_verbatim,,
30 30 
Latitude1,decimalLatitude,,
31 31 
Longitude1,decimalLongitude,,
inputs/NCU/Specimen/VegBIEN.csv
14 14 
SpecimenPK,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
15 15 
firstCollectorRemarks,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists","Actually the collector's number, not remarks"
16 16 
cultivated,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/else/_first/1",
17 
VerbatimLocality,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2/_alt/1,
18 
CityLocality,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2/_alt/2,
17 
VerbatimLocality,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2,
19 18 
CollectionDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
20 19 
Description,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1,
21 20 
firstCollectorRemarks,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2,"Actually the collector's number, not remarks"
......
44 43 
OriginalTaxonLabel,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonomicname,
45 44 
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
46 45 
firstCollectorRemarks,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then","Actually the collector's number, not remarks"
47 
VerbatimLocality,/location/locationnarrative/_merge/2/_alt/1,
48 
CityLocality,/location/locationnarrative/_merge/2/_alt/2,
46 
VerbatimLocality,/location/locationnarrative/_merge/2,
49 47 
Latitude1,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
50 48 
Longitude1,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
51 49 
Loc_AltN,/location/locationplace/*_id/place/*_id/coordinates/verbatimlatitude,
......
61 59 
BarCode,,"** No non-empty join mapping for OMIT#BarCode ** Omitted because this isn't specified on all rows, but SpecimenPK is"
62 60 
BlockLocationReason,,** No join mapping for *BlockLocationReason **
63 61 
BlockSpecificLocation,,** No join mapping for *BlockSpecificLocation **
62 
CityLocality,,** No join mapping for municipality **
64 63 
CollectionObjectID,,** No join mapping for *CollectionObjectID **
65 64 
CollectionObjectTypeID,,** No join mapping for *CollectionObjectTypeID **
66 65 
Cultivated,,** No join mapping for cultivated_verbatim **
inputs/NCU/Specimen/test.xml.ref
24 24 
                                </2>
25 25 
                            </_alt>
26 26 
                        </authorlocationcode>
27 
                        <iscultivated>
28 
                            <_locationnarrative_is_cultivated>
29 
                                <locationnarrative>
30 
                                    <_alt>
31 
                                        <1>$VerbatimLocality</1>
32 
                                        <2>$CityLocality</2>
33 
                                    </_alt>
34 
                                </locationnarrative>
35 
                            </_locationnarrative_is_cultivated>
36 
                        </iscultivated>
27 
                        <iscultivated><_locationnarrative_is_cultivated><locationnarrative>$VerbatimLocality</locationnarrative></_locationnarrative_is_cultivated></iscultivated>
37 28 
                        <locationevent>
38 29 
                            <taxonoccurrence>
39 30 
                                <aggregateoccurrence>
......
99 90 
                                </taxondetermination>
100 91 
                            </taxonoccurrence>
101 92 
                        </locationevent>
102 
                        <locationnarrative>
103 
                            <_alt>
104 
                                <1>$VerbatimLocality</1>
105 
                                <2>$CityLocality</2>
106 
                            </_alt>
107 
                        </locationnarrative>
93 
                        <locationnarrative>$VerbatimLocality</locationnarrative>
108 94 
                        <locationplace>
109 95 
                            <place_id>
110 96 
                                <place>
inputs/NCU/Specimen/new_terms.csv
7 7 
CollectionDate,dateCollected,,
8 8 
CatalogSeriesPrefix,specimenHolderInstitutions,/_alt/1,
9 9 
Description,occurrenceRemarks,,
10 
CityLocality,verbatimLocality,/_alt/2,
10 
CityLocality,municipality,,
11 11 
Latitude1,decimalLatitude,,
12 12 
Longitude1,decimalLongitude,,
13 13 
Loc_AltN,verbatimLatitude,,
inputs/NCU/Specimen/unmapped_terms.csv
9 9 
*BlockSpecificLocation
10 10 
eventRemarks
11 11 
*FIPSStateCounty
12 
municipality
12 13 
cultivated_verbatim
13 14 
*LastAnnotationLabelTaxon
14 15 
*LastAnnotationDateVerbatim

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