|
1
|
NCU,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
|
|
2
|
CatalogNumber,"/_if[@name=""if specimen""]/cond/_exists",
|
|
3
|
SpecimenPK,"/_if[@name=""if specimen""]/cond/_exists",
|
|
4
|
CatalogSeriesPrefix,"/_if[@name=""if specimen""]/else/source/shortname/_first/1",= specimen.orig_collection.institution.acronym, specimen.specimenholder_institutions(0).acronym
|
|
5
|
SpecimenPK,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1",
|
|
6
|
CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
|
|
7
|
CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
|
8
|
SpecimenPK,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
|
9
|
CatalogSeriesPrefix,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then/_first/2",= specimen.orig_collection.institution.acronym, specimen.specimenholder_institutions(0).acronym
|
|
10
|
CollectionGUID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/2/_join/2",
|
|
11
|
CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
|
|
12
|
SpecimenPK,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
|
13
|
firstCollectorRemarks,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists","Actually the collector's number, not remarks"
|
|
14
|
cultivated,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/else/_first/1",
|
|
15
|
VerbatimLocality,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2,
|
|
16
|
CollectionDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
|
|
17
|
Description,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1,
|
|
18
|
firstCollectorRemarks,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2,"Actually the collector's number, not remarks"
|
|
19
|
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
|
|
20
|
CollectionGUID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_alt/2,
|
|
21
|
firstCollectorRemarks,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/else","Actually the collector's number, not remarks"
|
|
22
|
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
|
|
23
|
SpecimenPK,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
|
|
24
|
CatalogSeriesPrefix,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/name/_first/2",= specimen.orig_collection.institution.acronym, specimen.specimenholder_institutions(0).acronym
|
|
25
|
CatalogSeriesPrefix,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/sourcename/name/_first/2/_split:[separator=""[,;] *""]/value",= specimen.orig_collection.institution.acronym, specimen.specimenholder_institutions(0).acronym
|
|
26
|
SpecimenPK,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
|
|
27
|
firstCollectorRemarks,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3","Actually the collector's number, not remarks"
|
|
28
|
CurrentScientificNameWithAuthor,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/2",
|
|
29
|
CurrentScientificName,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/3",
|
|
30
|
firstCollectorName,/location/locationevent/taxonoccurrence/collector_id/party/fullname,
|
|
31
|
SpecimenPK,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
|
32
|
firstCollectorRemarks,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists","Actually the collector's number, not remarks"
|
|
33
|
cultivated,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/then/_first/1",
|
|
34
|
SpecimenPK,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
|
|
35
|
CurrentScientificNameWithAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/1,
|
|
36
|
CurrentScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1,
|
|
37
|
CurrentScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonname,
|
|
38
|
CurrentScientificNameWithAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonomicname,
|
|
39
|
OriginalTaxonLabel,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonomicname,
|
|
40
|
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
|
|
41
|
firstCollectorRemarks,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then","Actually the collector's number, not remarks"
|
|
42
|
VerbatimLocality,/location/locationnarrative/_merge/2,
|
|
43
|
Latitude1,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
|
|
44
|
Longitude1,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
|
|
45
|
Loc_AltN,/location/locationplace/*_id/place/*_id/coordinates/verbatimlatitude,
|
|
46
|
Loc_AltE,/location/locationplace/*_id/place/*_id/coordinates/verbatimlongitude,
|
|
47
|
CityLocality,/location/locationplace/*_id/place/*_id/placename[rank=municipality]/placename,
|
|
48
|
Country,/location/locationplace/*_id/place/country,
|
|
49
|
county,/location/locationplace/*_id/place/county,
|
|
50
|
Latitude1,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
|
|
51
|
Longitude1,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
|
|
52
|
Country,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/country/_first/2,
|
|
53
|
county,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,
|
|
54
|
State,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
|
|
55
|
State,/location/locationplace/*_id/place/stateprovince,
|
|
56
|
BarCode,,"** No non-empty join mapping for OMIT#BarCode ** Omitted because this isn't specified on all rows, but SpecimenPK is"
|
|
57
|
BlockLocationReason,,** No join mapping for *BlockLocationReason **
|
|
58
|
BlockSpecificLocation,,** No join mapping for *BlockSpecificLocation **
|
|
59
|
CollectionObjectID,,** No join mapping for *CollectionObjectID **
|
|
60
|
CollectionObjectTypeID,,** No join mapping for *CollectionObjectTypeID **
|
|
61
|
Cultivated,,** No join mapping for cultivated_verbatim **
|
|
62
|
DerivedFromID,,** No join mapping for *DerivedFromID **
|
|
63
|
EventRemarks,,** No join mapping for eventRemarks **
|
|
64
|
FIPSStateCounty,,** No join mapping for *FIPSStateCounty **
|
|
65
|
LandOwner,,** No join mapping for *LandOwner **
|
|
66
|
LastAnnotationDateVerbatim,,** No join mapping for *LastAnnotationDateVerbatim **
|
|
67
|
LastAnnotationLabelTaxon,,** No join mapping for *LastAnnotationLabelTaxon **
|
|
68
|
LastAnnotationRemarks,,** No join mapping for *LastAnnotationRemarks **
|
|
69
|
OwnerInstitution,,** No join mapping for specimenOwner ** = specimen.owner_collection.institution.name
|
|
70
|
TypeStatus,,** No join mapping for typeStatus **
|
|
71
|
database,,** No join mapping for *database **
|
|
72
|
lastAnnotationAgent,,** No join mapping for *lastAnnotationAgent **
|
|
73
|
row_num,,** No join mapping for *row_num **
|
